FFCP PHASE1:Hg19::chr3:69402726..69402747,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:69402726..69402747,- to FFCP PHASE1:Hg19::chr3:69402726..69402747,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23150 | |EntrezGene=23150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24886 | |HGNC=24886 | ||
|TSSclassifier=strong | |||
|UniProt=C9JAW0 | |UniProt=C9JAW0 | ||
|association_with_transcript=100bp_to_ENST00000460709_5end | |||
|cluster_id=chr3:69402726..69402747,- | |||
|coexpression_cluster_id=C2750 | |||
|description=CAGE_peak_6_at_FRMD4B_5end | |||
|id=chr3:69402726..69402747,- | |||
|ontology_enrichment_celltype=CL:0000766!1.12e-37!76;CL:0000557!3.02e-37!71;CL:0000763!4.53e-35!112;CL:0000049!4.53e-35!112;CL:0002057!1.47e-33!42;CL:0000839!5.05e-33!70;CL:0002009!1.39e-32!65;CL:0002194!1.26e-30!63;CL:0000576!1.26e-30!63;CL:0000040!1.26e-30!63;CL:0000559!1.26e-30!63;CL:0000860!4.40e-30!45;CL:0000037!2.99e-25!172;CL:0000566!2.99e-25!172;CL:0000115!2.49e-24!35;CL:0000738!9.58e-24!140;CL:0000988!8.02e-23!182;CL:0002032!4.40e-22!165;CL:0000837!4.40e-22!165;CL:0002139!6.37e-22!24;CL:0002031!1.29e-18!124;CL:0002078!2.02e-17!44;CL:0000071!7.69e-17!18;CL:0002546!7.69e-17!18;CL:0002087!3.32e-16!119;CL:0000213!1.40e-10!57;CL:0000215!1.40e-10!57;CL:1000413!9.26e-10!9;CL:0002543!2.69e-07!6;CL:0002544!5.19e-07!6;CL:0002393!9.60e-07!9;CL:0002397!9.60e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-36;33!CL:0002057;2.69e-36;33!CL:0000473;2.79e-34;39!CL:0000234;2.79e-34;39!CL:0000115;6.74e-30;36!CL:0002139;1.46e-28;24!CL:0000576;5.72e-28;48!CL:0000766;8.04e-26;69!CL:0000071;2.41e-21;18!CL:0002078;6.08e-16;45!CL:0000763;7.88e-15;100!CL:1000413;2.62e-13;9!CL:0000213;2.33e-10;58!CL:0000215;2.33e-10;58!CL:0002543;1.03e-09;6!CL:0002544;2.14e-09;6!CL:0002138;9.06e-09;6!CL:0000738;1.77e-07;136!CL:0000097;2.35e-07;5!CL:0002393;2.79e-07;6!CL:0002397;2.79e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.98e-54,72;CL:0000557,2.83e-53,67;CL:0000473,1.02e-48,48;CL:0000234,1.02e-48,48;CL:0000839,1.59e-47,66;CL:0002009,1.51e-46,61;CL:0000763,1.94e-46,108;CL:0000049,1.94e-46,108;CL:0002194,1.06e-43,59;CL:0000576,1.06e-43,59;CL:0000040,1.06e-43,59;CL:0000559,1.06e-43,59;CL:0000860,1.58e-43,42;CL:0002057,1.58e-43,42;CL:0000115,5.11e-34,36;CL:0002139,1.39e-28,24;CL:0000037,8.52e-28,168;CL:0000738,3.70e-27,136;CL:0000988,3.64e-25,177;CL:0002078,7.09e-25,45;CL:0002032,1.36e-23,161;CL:0000837,1.36e-23,161;CL:0000071,2.41e-21,18;CL:0002546,2.41e-21,18;CL:0002031,1.63e-20,120;CL:0002087,2.83e-17,115;CL:0000213,7.93e-17,58;CL:0000215,7.93e-17,58;CL:1000413,3.12e-13,9;CL:0002543,9.83e-10,6;CL:0002544,2.50e-09,6;CL:0005020,8.63e-09,6;CL:0002138,8.63e-09,6;CL:0005022,8.63e-09,6;CL:0000097,2.41e-07,5;CL:0002028,2.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;9.46e-32;42!CL:0002546;2.41e-21;18!CL:0000049;1.16e-13;108!CL:0005022;9.06e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.18e-40!112;UBERON:0002390!1.70e-35!102;UBERON:0003061!1.70e-35!102;UBERON:0002371!1.02e-32!80;UBERON:0002405!2.39e-31!115;UBERON:0003081!4.02e-31!216;UBERON:0001474!1.12e-28!86;UBERON:0004765!3.30e-22!101;UBERON:0001434!3.30e-22!101;UBERON:0007023!2.46e-21!115;UBERON:0001986!7.69e-17!18;UBERON:0004638!7.69e-17!18;UBERON:0004852!7.69e-17!18;UBERON:0000487!2.10e-12!22;UBERON:0006914!6.19e-11!25;UBERON:0003915!9.26e-10!9;UBERON:0004700!9.26e-10!9;UBERON:0001917!9.26e-10!9;UBERON:0002204!5.50e-08!167;UBERON:0001009!4.60e-07!113;UBERON:0004535!7.67e-07!110;UBERON:0000467!9.27e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.41e-21;18!UBERON:0001986;2.41e-21;18!UBERON:0004852;2.41e-21;18!UBERON:0000487;2.21e-16;22!UBERON:0006914;9.98e-14;25!UBERON:0003915;2.62e-13;9!UBERON:0004700;2.62e-13;9!UBERON:0001917;2.62e-13;9!UBERON:0000490;1.61e-08;33!UBERON:0002465;1.12e-07;10!UBERON:0002193;8.63e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.66e-58,108;UBERON:0002405,9.41e-55,93;UBERON:0002390,7.34e-51,98;UBERON:0003061,7.34e-51,98;UBERON:0003081,5.83e-47,203;UBERON:0002371,8.78e-47,76;UBERON:0001474,6.56e-42,82;UBERON:0004765,1.94e-36,90;UBERON:0001434,7.34e-31,100;UBERON:0000926,2.63e-23,315;UBERON:0004120,2.63e-23,315;UBERON:0006603,2.63e-23,315;UBERON:0004638,2.41e-21,18;UBERON:0001986,2.41e-21,18;UBERON:0004852,2.41e-21,18;UBERON:0000487,2.21e-16,22;UBERON:0006914,9.97e-14,25;UBERON:0003915,3.12e-13,9;UBERON:0004700,3.12e-13,9;UBERON:0001917,3.12e-13,9;UBERON:0002204,1.99e-11,167;UBERON:0000055,1.50e-09,68;UBERON:0004535,6.51e-09,109;UBERON:0001009,2.16e-08,112;UBERON:0002465,9.18e-08,10;UBERON:0002049,2.68e-07,78;UBERON:0007798,2.68e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.472264687882075,2.36018566109342,2.68680578668049,4.64448369948228,0,0,0,0,0,9.39521405871511,3.32397245119126,4.41197784434312,3.47217393145363,4.03047853631864,3.88672399222775,7.98484259665978,12.2134520574834,5.66813915533214,11.6440349370152,9.52959051313307,2.87817521615278,4.02618282163635,4.31538588483226,5.89169625016932,4.7296445977717,8.27389633767885,5.80936215225443,8.12558919566051,5.45902784673554,2.18324920046277,4.26974620445661,5.20342617030534,5.1348644332175,4.47535988059329,3.62836430205388,8.7764009353518,7.6720455095885,4.64334781805734,6.24123747160254,6.22822248995575,2.26123798731069,4.17186334736161,6.73285418585862,5.44859552370032,4.05105399586321,11.3926459478718,2.11255286311942,2.76385589954557,2.72556239160889,4.71780250815279,4.05477610672067,3.85741408072992,2.28010194992999,0.59675003159727,0.730656615058536,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0,13.2171328579026,5.04457706683382,4.47752944117631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.710331756132051,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0.522389211897802,2.52620124985844,0.476981248610684,14.2998727695032,8.54352253057999,13.7146061083027,9.46258054616737,9.02565304179745,10.7408508965562,6.29249154314859,8.25354125820202,12.5396979922086,11.3703374034505,12.4518191940349,16.0665894127042,3.22263453687318,0.760272105718513,1.70843440283719,3.30896772311282,8.1014194788176,12.1447630466348,6.51135180615892,8.89630695818246,15.3316637465883,9.49265659568129,9.52649068438118,0,0,0,0,0,0,0,0,0.560677600142307,1.06748995729705,0,0.933633106199299,1.88594940897563,0.817309515567294,0,0,0,0,1.1409436430889,0,0,0,0,0.61246251376468,0,1.65321249881225,0,0,0,0,0,0,0.277064115484183,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75352764178792,2.31492756288305,4.56609965363036,0,0,14.280586353069,0,6.8370334652815,0,0,0,0,0,0,2.46331618947972,4.31437326664808,8.50045273717165,6.3412779503463,8.2057581727147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,9.5428847372104,4.21667878966063,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0.254094624222463,0,0,0,0,4.49404214368309,8.97484377612075,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,2.5885704098234,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.68666920354483,2.89159298970077,3.45465465763423,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0.507447609232169,0,1.13929437434833,1.90585420366231,1.23408681925858,0,1.08006287447623,2.37937552888281,0,0,0,0,0.721346064882224,0,0,0.59873811429845,1.7235483311913,4.23347165447766,0,4.7735520279288,0.912938716132769,0,7.51903431270201,1.18504244461122,0,0.201799707191048,0,1.03051603426729,0,0,0,1.9538809540204,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0.994147647766298,1.1253553312841,0,0,0,3.18796781201712,1.10513566212459,0,0,0,0,0,0,0,1.57829449019094,7.18449277040819,0,0,0.463840490809256,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.87754158861589,0,0,1.07730361905316,0,0,0,0,0,0,2.13213910407454,0,2.19772358953035,0.332423363800313,0,0,0,0,1.11255605286265,0,0,0,0,0.995261931078505,0.973033209536731,2.4441205797345,0,0,0,0.808813595768125,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,11.3103977534993,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0.872901148395775,0,1.12990370390266,0,0,0.379864775735272,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,1.27746588066972,0,0.262887354279314,2.23425921017803,1.83328339209347,1.43574604915363,0.199679000498991,0,0.89268582976749,0.806201669840715,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,30.8214231425556,39.4638996824554,0.607495566580247,0,0.472834243795189,0.577000469484979,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0,0.439656701034247,2.65013777824443,0.258565912723101,0.26446520348538,0,0,1.49502377594773,0.78602152549833,1.65695622138878,1.9846640872478,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.244052529803926,0.3755727921195,0,0.443716206147409,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0.327130788511688,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0.642292250964595,0,0.798169295285756,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.570742291745161,0,0,2.97726707033577,0,0,0.535701835878287,1.3451348888753,0,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| ||
|short_description=p6@FRMD4B | |||
}} | }} |
Latest revision as of 11:46, 19 September 2015
Short description: | p6@FRMD4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FRMD4B_5end |
Coexpression cluster: | C2750_Endothelial_immature_Macrophage_Mast_CD34_Lymphatic_CD14 |
Association with transcript: | 100bp_to_ENST00000460709_5end |
EntrezGene: | FRMD4B |
HGNC: | 24886 |
UniProt: | C9JAW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.66e-58 | 108 |
immune system | 9.41e-55 | 93 |
hematopoietic system | 7.34e-51 | 98 |
blood island | 7.34e-51 | 98 |
lateral plate mesoderm | 5.83e-47 | 203 |
bone marrow | 8.78e-47 | 76 |
bone element | 6.56e-42 | 82 |
skeletal element | 1.94e-36 | 90 |
skeletal system | 7.34e-31 | 100 |
mesoderm | 2.63e-23 | 315 |
mesoderm-derived structure | 2.63e-23 | 315 |
presumptive mesoderm | 2.63e-23 | 315 |
blood vessel endothelium | 2.41e-21 | 18 |
endothelium | 2.41e-21 | 18 |
cardiovascular system endothelium | 2.41e-21 | 18 |
simple squamous epithelium | 2.21e-16 | 22 |
squamous epithelium | 9.97e-14 | 25 |
endothelial tube | 3.12e-13 | 9 |
arterial system endothelium | 3.12e-13 | 9 |
endothelium of artery | 3.12e-13 | 9 |
musculoskeletal system | 1.99e-11 | 167 |
vessel | 1.50e-09 | 68 |
cardiovascular system | 6.51e-09 | 109 |
circulatory system | 2.16e-08 | 112 |
lymphoid system | 9.18e-08 | 10 |
vasculature | 2.68e-07 | 78 |
vascular system | 2.68e-07 | 78 |