FFCP PHASE1:Hg19::chr2:201981047..201981066,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:201981047..201981066,+
|short_description=p3@CFLAR
|description=CAGE_peak_3_at_CFLAR_5end
|association_with_transcript=-63bp_to_ENST00000395148_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8837 | |EntrezGene=8837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |HGNC=1876 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAP3 | |UniProt=E9PAP3 | ||
|association_with_transcript=-63bp_to_ENST00000395148_5end | |||
|cluster_id=chr2:201981047..201981066,+ | |||
|description=CAGE_peak_3_at_CFLAR_5end | |||
|id=chr2:201981047..201981066,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.23e-21!42;CL:0000766!2.84e-19!76;CL:0000860!4.18e-19!45;CL:0002009!9.60e-17!65;CL:0002194!3.08e-16!63;CL:0000576!3.08e-16!63;CL:0000040!3.08e-16!63;CL:0000559!3.08e-16!63;CL:0000557!8.77e-16!71;CL:0000839!7.11e-14!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.06e-16;33!CL:0002057;5.06e-16;33!CL:0000473;1.62e-14;39!CL:0000234;1.62e-14;39!CL:0000576;1.33e-13;48!CL:0000766;5.03e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.01e-23,48;CL:0000234,9.01e-23,48;CL:0000860,1.06e-21,42;CL:0002057,1.06e-21,42;CL:0000766,6.13e-21,72;CL:0002009,2.51e-18,61;CL:0002194,8.07e-18,59;CL:0000576,8.07e-18,59;CL:0000040,8.07e-18,59;CL:0000559,8.07e-18,59;CL:0000557,2.86e-17,67;CL:0000839,3.21e-15,66 | |||
|ontology_enrichment_development_v019=CL:0002057;7.15e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.00e-24!625;UBERON:0000480!2.97e-24!626;UBERON:0000468!7.91e-24!659;UBERON:0000062!3.00e-22!511;UBERON:0007023!2.03e-18!115;UBERON:0002050!1.05e-14!605;UBERON:0005423!1.05e-14!605;UBERON:0000923!1.22e-14!604;UBERON:0005291!1.22e-14!604;UBERON:0006598!1.22e-14!604;UBERON:0002532!1.22e-14!604;UBERON:0000922!8.43e-14!612;UBERON:0002390!1.02e-11!102;UBERON:0003061!1.02e-11!102;UBERON:0002371!1.35e-11!80;UBERON:0002193!3.06e-11!112;UBERON:0002405!3.81e-11!115;UBERON:0000926!7.14e-11!448;UBERON:0004120!7.14e-11!448;UBERON:0006603!7.14e-11!448;UBERON:0001474!8.67e-11!86;UBERON:0004765!2.50e-09!101;UBERON:0001434!2.50e-09!101;UBERON:0003081!2.27e-07!216;UBERON:0000479!2.65e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.51e-19,114;UBERON:0005423,4.13e-15,581;UBERON:0000922,8.05e-14,592;UBERON:0002050,3.54e-13,564;UBERON:0002371,1.23e-12,76;UBERON:0002390,1.43e-12,98;UBERON:0003061,1.43e-12,98;UBERON:0000923,1.64e-12,560;UBERON:0010316,1.64e-12,560;UBERON:0005291,1.64e-12,560;UBERON:0006598,1.64e-12,560;UBERON:0010317,1.64e-12,560;UBERON:0002532,1.64e-12,560;UBERON:0002193,3.93e-12,108;UBERON:0001474,1.03e-11,82;UBERON:0002405,8.67e-11,93;UBERON:0004765,1.28e-09,90;UBERON:0001434,9.50e-09,100;UBERON:0003081,1.43e-07,203;UBERON:0000479,5.41e-07,773 | |||
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| ||
|short_description=p3@CFLAR | |||
}} | }} |
Latest revision as of 11:52, 19 September 2015
Short description: | p3@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CFLAR_5end |
Coexpression cluster: | NA |
Association with transcript: | -63bp_to_ENST00000395148_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | E9PAP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.01e-23 | 48 |
phagocyte | 9.01e-23 | 48 |
classical monocyte | 1.06e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-21 | 42 |
myeloid leukocyte | 6.13e-21 | 72 |
macrophage dendritic cell progenitor | 2.51e-18 | 61 |
monopoietic cell | 8.07e-18 | 59 |
monocyte | 8.07e-18 | 59 |
monoblast | 8.07e-18 | 59 |
promonocyte | 8.07e-18 | 59 |
granulocyte monocyte progenitor cell | 2.86e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.21e-15 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.51e-19 | 114 |
developing anatomical structure | 4.13e-15 | 581 |
embryo | 8.05e-14 | 592 |
embryonic structure | 3.54e-13 | 564 |
bone marrow | 1.23e-12 | 76 |
hematopoietic system | 1.43e-12 | 98 |
blood island | 1.43e-12 | 98 |
germ layer | 1.64e-12 | 560 |
germ layer / neural crest | 1.64e-12 | 560 |
embryonic tissue | 1.64e-12 | 560 |
presumptive structure | 1.64e-12 | 560 |
germ layer / neural crest derived structure | 1.64e-12 | 560 |
epiblast (generic) | 1.64e-12 | 560 |
hemolymphoid system | 3.93e-12 | 108 |
bone element | 1.03e-11 | 82 |
immune system | 8.67e-11 | 93 |
skeletal element | 1.28e-09 | 90 |
skeletal system | 9.50e-09 | 100 |
lateral plate mesoderm | 1.43e-07 | 203 |
tissue | 5.41e-07 | 773 |