FFCP PHASE1:Hg19::chr19:51014460..51014503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126119 | |EntrezGene=126119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28853 | |HGNC=28853 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002pso.1,uc002psp.1,uc002psq.1_5end | |association_with_transcript=0bp_to_uc002pso.1,uc002psp.1,uc002psq.1_5end | ||
|cluster_id=chr19:51014460..51014503,- | |||
|coexpression_cluster_id=C385 | |coexpression_cluster_id=C385 | ||
|description=CAGE_peak_1_at_JOSD2_5end | |description=CAGE_peak_1_at_JOSD2_5end | ||
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|ontology_enrichment_celltype=CL:0000222!3.28e-14!119;CL:0000183!1.63e-12!59;CL:0000192!4.84e-12!42;CL:0000514!4.84e-12!42;CL:0000680!1.65e-11!57;CL:0000056!1.65e-11!57;CL:0000355!1.65e-11!57;CL:0000187!6.22e-11!54;CL:0000055!8.63e-11!180;CL:0000359!9.33e-11!32;CL:0000136!3.00e-08!15;CL:0000220!1.24e-07!246;CL:0000393!2.91e-07!60;CL:0000211!2.91e-07!60;CL:0002321!4.88e-07!248 | |ontology_enrichment_celltype=CL:0000222!3.28e-14!119;CL:0000183!1.63e-12!59;CL:0000192!4.84e-12!42;CL:0000514!4.84e-12!42;CL:0000680!1.65e-11!57;CL:0000056!1.65e-11!57;CL:0000355!1.65e-11!57;CL:0000187!6.22e-11!54;CL:0000055!8.63e-11!180;CL:0000359!9.33e-11!32;CL:0000136!3.00e-08!15;CL:0000220!1.24e-07!246;CL:0000393!2.91e-07!60;CL:0000211!2.91e-07!60;CL:0002321!4.88e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.94e-10;32!CL:0000192;2.42e-09;43!CL:0000136;1.10e-07;13 | |ontology_enrichment_celltype_v019=CL:0000359;1.94e-10;32!CL:0000192;2.42e-09;43!CL:0000136;1.10e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.18e-15,121;CL:0000192,1.68e-12,43;CL:0000514,1.68e-12,43;CL:0000680,6.21e-12,58;CL:0000056,6.21e-12,58;CL:0000355,6.21e-12,58;CL:0000187,2.35e-11,55;CL:0000359,9.31e-11,32;CL:0000136,2.99e-08,15;CL:0000393,1.29e-07,61;CL:0000211,1.29e-07,61;CL:0002321,1.92e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;2.42e-09;43 | |ontology_enrichment_development_v019=CL:0000514;2.42e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.83e-14!83;UBERON:0002329!4.83e-14!83;UBERON:0003077!4.83e-14!83;UBERON:0003059!4.83e-14!83;UBERON:0007282!4.83e-14!83;UBERON:0009618!4.83e-14!83;UBERON:0007285!4.83e-14!83;UBERON:0004290!9.06e-14!70;UBERON:0002100!1.30e-13!216;UBERON:0000475!3.80e-13!365;UBERON:0000486!1.40e-12!82;UBERON:0001134!1.16e-11!61;UBERON:0002036!1.16e-11!61;UBERON:0003082!1.16e-11!61;UBERON:0001637!1.45e-11!42;UBERON:0003509!1.45e-11!42;UBERON:0004572!1.45e-11!42;UBERON:0005256!1.95e-11!143;UBERON:0002385!3.45e-11!63;UBERON:0001015!3.45e-11!63;UBERON:0000383!3.45e-11!63;UBERON:0004872!1.50e-10!84;UBERON:0002049!2.95e-10!79;UBERON:0007798!2.95e-10!79;UBERON:0001981!9.51e-10!60;UBERON:0007500!9.51e-10!60;UBERON:0004537!9.51e-10!60;UBERON:0006965!9.51e-10!60;UBERON:0000490!2.26e-09!138;UBERON:0000055!2.56e-09!69;UBERON:0004573!3.34e-09!33;UBERON:0004571!3.34e-09!33;UBERON:0003104!3.49e-09!238;UBERON:0009142!3.49e-09!238;UBERON:0000483!7.95e-09!309;UBERON:0000119!1.39e-08!312;UBERON:0000481!1.65e-08!347;UBERON:0003914!3.02e-08!118;UBERON:0000477!4.35e-08!286;UBERON:0000926!2.19e-07!448;UBERON:0004120!2.19e-07!448;UBERON:0006603!2.19e-07!448;UBERON:0000468!4.94e-07!659;UBERON:0004111!8.51e-07!241 | |ontology_enrichment_uberon=UBERON:0000914!4.83e-14!83;UBERON:0002329!4.83e-14!83;UBERON:0003077!4.83e-14!83;UBERON:0003059!4.83e-14!83;UBERON:0007282!4.83e-14!83;UBERON:0009618!4.83e-14!83;UBERON:0007285!4.83e-14!83;UBERON:0004290!9.06e-14!70;UBERON:0002100!1.30e-13!216;UBERON:0000475!3.80e-13!365;UBERON:0000486!1.40e-12!82;UBERON:0001134!1.16e-11!61;UBERON:0002036!1.16e-11!61;UBERON:0003082!1.16e-11!61;UBERON:0001637!1.45e-11!42;UBERON:0003509!1.45e-11!42;UBERON:0004572!1.45e-11!42;UBERON:0005256!1.95e-11!143;UBERON:0002385!3.45e-11!63;UBERON:0001015!3.45e-11!63;UBERON:0000383!3.45e-11!63;UBERON:0004872!1.50e-10!84;UBERON:0002049!2.95e-10!79;UBERON:0007798!2.95e-10!79;UBERON:0001981!9.51e-10!60;UBERON:0007500!9.51e-10!60;UBERON:0004537!9.51e-10!60;UBERON:0006965!9.51e-10!60;UBERON:0000490!2.26e-09!138;UBERON:0000055!2.56e-09!69;UBERON:0004573!3.34e-09!33;UBERON:0004571!3.34e-09!33;UBERON:0003104!3.49e-09!238;UBERON:0009142!3.49e-09!238;UBERON:0000483!7.95e-09!309;UBERON:0000119!1.39e-08!312;UBERON:0000481!1.65e-08!347;UBERON:0003914!3.02e-08!118;UBERON:0000477!4.35e-08!286;UBERON:0000926!2.19e-07!448;UBERON:0004120!2.19e-07!448;UBERON:0006603!2.19e-07!448;UBERON:0000468!4.94e-07!659;UBERON:0004111!8.51e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.16e-08;33!UBERON:0004571;3.16e-08;33!UBERON:0001637;3.71e-08;42!UBERON:0003509;3.71e-08;42!UBERON:0004572;3.71e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;3.16e-08;33!UBERON:0004571;3.16e-08;33!UBERON:0001637;3.71e-08;42!UBERON:0003509;3.71e-08;42!UBERON:0004572;3.71e-08;42 | ||
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| ||
|short_description=p1@JOSD2 | |short_description=p1@JOSD2 | ||
}} | }} |
Latest revision as of 12:07, 19 September 2015
Short description: | p1@JOSD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JOSD2_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 0bp_to_uc002pso.1, uc002psp.1, uc002psq.1_5end |
EntrezGene: | JOSD2 |
HGNC: | 28853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.18e-15 | 121 |
smooth muscle cell | 1.68e-12 | 43 |
smooth muscle myoblast | 1.68e-12 | 43 |
muscle precursor cell | 6.21e-12 | 58 |
myoblast | 6.21e-12 | 58 |
multi-potent skeletal muscle stem cell | 6.21e-12 | 58 |
muscle cell | 2.35e-11 | 55 |
vascular associated smooth muscle cell | 9.31e-11 | 32 |
fat cell | 2.99e-08 | 15 |
electrically responsive cell | 1.29e-07 | 61 |
electrically active cell | 1.29e-07 | 61 |
embryonic cell | 1.92e-07 | 250 |