FFCP PHASE1:Hg19::chr2:201994091..201994109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |EntrezGene=8837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |HGNC=1876 | ||
|TSSclassifier=strong | |||
|UniProt=C9JV51 | |UniProt=C9JV51 | ||
|association_with_transcript=39bp_to_ENST00000417748_5end | |association_with_transcript=39bp_to_ENST00000417748_5end | ||
|cluster_id=chr2:201994091..201994109,+ | |||
|coexpression_cluster_id=C4171 | |coexpression_cluster_id=C4171 | ||
|description=CAGE_peak_20_at_CFLAR_5end | |description=CAGE_peak_20_at_CFLAR_5end | ||
|id=chr2:201994091..201994109,+ | |id=chr2:201994091..201994109,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.85e-22!42;CL:0000860!2.94e-20!45;CL:0002009!5.73e-18!65;CL:0000557!3.53e-17!71;CL:0002194!1.20e-16!63;CL:0000576!1.20e-16!63;CL:0000040!1.20e-16!63;CL:0000559!1.20e-16!63;CL:0000766!9.36e-16!76;CL:0000839!2.30e-15!70;CL:0000763!3.23e-15!112;CL:0000049!3.23e-15!112;CL:0002139!5.11e-15!24;CL:0000071!8.18e-12!18;CL:0002546!8.18e-12!18;CL:0002032!5.47e-11!165;CL:0000837!5.47e-11!165;CL:0000738!1.49e-10!140;CL:0002031!3.18e-10!124;CL:0000115!3.29e-10!35;CL:0000213!4.22e-10!57;CL:0000215!4.22e-10!57;CL:0000037!6.29e-10!172;CL:0000566!6.29e-10!172;CL:0000988!1.13e-09!182;CL:0002087!1.17e-09!119;CL:0002078!1.77e-09!44;CL:1000413!3.62e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.85e-22!42;CL:0000860!2.94e-20!45;CL:0002009!5.73e-18!65;CL:0000557!3.53e-17!71;CL:0002194!1.20e-16!63;CL:0000576!1.20e-16!63;CL:0000040!1.20e-16!63;CL:0000559!1.20e-16!63;CL:0000766!9.36e-16!76;CL:0000839!2.30e-15!70;CL:0000763!3.23e-15!112;CL:0000049!3.23e-15!112;CL:0002139!5.11e-15!24;CL:0000071!8.18e-12!18;CL:0002546!8.18e-12!18;CL:0002032!5.47e-11!165;CL:0000837!5.47e-11!165;CL:0000738!1.49e-10!140;CL:0002031!3.18e-10!124;CL:0000115!3.29e-10!35;CL:0000213!4.22e-10!57;CL:0000215!4.22e-10!57;CL:0000037!6.29e-10!172;CL:0000566!6.29e-10!172;CL:0000988!1.13e-09!182;CL:0002087!1.17e-09!119;CL:0002078!1.77e-09!44;CL:1000413!3.62e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.09e-47;33!CL:0002057;7.09e-47;33!CL:0000473;3.99e-36;39!CL:0000234;3.99e-36;39!CL:0000576;6.40e-22;48!CL:0002139;1.03e-21;24!CL:0000071;2.21e-16;18!CL:0000766;1.46e-13;69!CL:0000115;1.52e-13;36!CL:1000413;7.80e-12;9!CL:0002078;2.64e-10;45!CL:0000763;3.22e-08;100!CL:0000213;3.97e-08;58!CL:0000215;3.97e-08;58!CL:0002544;1.57e-07;6!CL:0002087;2.66e-07;104!CL:0002138;6.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.07e-41,42;CL:0002057,8.07e-41,42;CL:0000473,4.71e-39,48;CL:0000234,4.71e-39,48;CL:0002009,5.56e-32,61;CL:0002194,5.22e-29,59;CL:0000576,5.22e-29,59;CL:0000040,5.22e-29,59;CL:0000559,5.22e-29,59;CL:0000557,3.95e-28,67;CL:0000766,4.88e-25,72;CL:0000839,7.70e-25,66;CL:0002139,3.38e-22,24;CL:0000763,4.53e-21,108;CL:0000049,4.53e-21,108;CL:0002031,5.14e-18,120;CL:0002087,7.12e-17,115;CL:0000071,9.62e-17,18;CL:0002546,9.62e-17,18;CL:0000738,2.38e-16,136;CL:0000115,4.59e-16,36;CL:0002032,5.02e-16,161;CL:0000837,5.02e-16,161;CL:0000037,8.75e-15,168;CL:0002078,1.40e-14,45;CL:0000988,2.41e-13,177;CL:1000413,1.97e-12,9;CL:0000213,4.50e-12,58;CL:0000215,4.50e-12,58;CL:0002544,6.98e-08,6;CL:0005020,5.20e-07,6;CL:0002138,5.20e-07,6;CL:0005022,5.20e-07,6;CL:0000222,7.55e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-30;42!CL:0002546;2.21e-16;18!CL:0000049;1.62e-07;108!CL:0005022;6.86e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.40e-15!216;UBERON:0002193!6.46e-15!112;UBERON:0002371!1.06e-12!80;UBERON:0002390!2.00e-12!102;UBERON:0003061!2.00e-12!102;UBERON:0001986!8.18e-12!18;UBERON:0004638!8.18e-12!18;UBERON:0004852!8.18e-12!18;UBERON:0002405!1.09e-11!115;UBERON:0001474!2.30e-10!86;UBERON:0000055!7.90e-10!69;UBERON:0001981!1.35e-08!60;UBERON:0007500!1.35e-08!60;UBERON:0004537!1.35e-08!60;UBERON:0006965!1.35e-08!60;UBERON:0002049!1.51e-08!79;UBERON:0007798!1.51e-08!79;UBERON:0001637!3.43e-08!42;UBERON:0003509!3.43e-08!42;UBERON:0004572!3.43e-08!42;UBERON:0000487!3.79e-08!22;UBERON:0004765!7.36e-08!101;UBERON:0001434!7.36e-08!101;UBERON:0001009!1.43e-07!113;UBERON:0003915!3.62e-07!9;UBERON:0004700!3.62e-07!9;UBERON:0001917!3.62e-07!9;UBERON:0006914!5.20e-07!25;UBERON:0004872!5.70e-07!84;UBERON:0004535!9.47e-07!110 | |ontology_enrichment_uberon=UBERON:0003081!1.40e-15!216;UBERON:0002193!6.46e-15!112;UBERON:0002371!1.06e-12!80;UBERON:0002390!2.00e-12!102;UBERON:0003061!2.00e-12!102;UBERON:0001986!8.18e-12!18;UBERON:0004638!8.18e-12!18;UBERON:0004852!8.18e-12!18;UBERON:0002405!1.09e-11!115;UBERON:0001474!2.30e-10!86;UBERON:0000055!7.90e-10!69;UBERON:0001981!1.35e-08!60;UBERON:0007500!1.35e-08!60;UBERON:0004537!1.35e-08!60;UBERON:0006965!1.35e-08!60;UBERON:0002049!1.51e-08!79;UBERON:0007798!1.51e-08!79;UBERON:0001637!3.43e-08!42;UBERON:0003509!3.43e-08!42;UBERON:0004572!3.43e-08!42;UBERON:0000487!3.79e-08!22;UBERON:0004765!7.36e-08!101;UBERON:0001434!7.36e-08!101;UBERON:0001009!1.43e-07!113;UBERON:0003915!3.62e-07!9;UBERON:0004700!3.62e-07!9;UBERON:0001917!3.62e-07!9;UBERON:0006914!5.20e-07!25;UBERON:0004872!5.70e-07!84;UBERON:0004535!9.47e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.21e-16;18!UBERON:0001986;2.21e-16;18!UBERON:0004852;2.21e-16;18!UBERON:0000487;9.80e-13;22!UBERON:0003915;7.80e-12;9!UBERON:0004700;7.80e-12;9!UBERON:0001917;7.80e-12;9!UBERON:0006914;8.83e-11;25!UBERON:0000055;9.55e-08;65!UBERON:0007500;1.58e-07;56!UBERON:0001981;1.58e-07;56!UBERON:0004537;1.58e-07;56!UBERON:0000490;5.44e-07;33 | |||
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| ||
|short_description=p20@CFLAR | |short_description=p20@CFLAR | ||
}} | }} |
Latest revision as of 12:22, 19 September 2015
Short description: | p20@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_CFLAR_5end |
Coexpression cluster: | C4171_CD14_meningioma_Endothelial_adult_immature_mesothelioma_b |
Association with transcript: | 39bp_to_ENST00000417748_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | C9JV51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 2.47e-26 | 93 |
bone marrow | 1.67e-23 | 76 |
bone element | 5.39e-21 | 82 |
hemolymphoid system | 6.55e-21 | 108 |
lateral plate mesoderm | 8.31e-20 | 203 |
skeletal element | 3.50e-18 | 90 |
hematopoietic system | 5.18e-17 | 98 |
blood island | 5.18e-17 | 98 |
blood vessel endothelium | 9.62e-17 | 18 |
endothelium | 9.62e-17 | 18 |
cardiovascular system endothelium | 9.62e-17 | 18 |
skeletal system | 2.53e-15 | 100 |
simple squamous epithelium | 5.07e-13 | 22 |
endothelial tube | 1.97e-12 | 9 |
arterial system endothelium | 1.97e-12 | 9 |
endothelium of artery | 1.97e-12 | 9 |
vessel | 1.42e-11 | 68 |
squamous epithelium | 5.02e-11 | 25 |
musculoskeletal system | 3.97e-10 | 167 |
mesoderm | 4.75e-10 | 315 |
mesoderm-derived structure | 4.75e-10 | 315 |
presumptive mesoderm | 4.75e-10 | 315 |
vasculature | 3.34e-09 | 78 |
vascular system | 3.34e-09 | 78 |
epithelial tube open at both ends | 7.88e-09 | 59 |
blood vessel | 7.88e-09 | 59 |
blood vasculature | 7.88e-09 | 59 |
vascular cord | 7.88e-09 | 59 |
artery | 4.15e-07 | 42 |
arterial blood vessel | 4.15e-07 | 42 |
arterial system | 4.15e-07 | 42 |