FFCP PHASE1:Hg19::chr2:202098175..202098202,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:202098175..202098202,+ to FFCP PHASE1:Hg19::chr2:202098175..202098202,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=841 | |EntrezGene=841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1509 | |HGNC=1509 | ||
|TSSclassifier=strong | |||
|UniProt=Q14790 | |UniProt=Q14790 | ||
|association_with_transcript=0bp_to_ENST00000264275,ENST00000432109,ENST00000471383,ENST00000490682_5end | |||
|cluster_id=chr2:202098175..202098202,+ | |||
|description=CAGE_peak_2_at_CASP8_5end | |||
|id=chr2:202098175..202098202,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.89e-25!172;CL:0000566!1.89e-25!172;CL:0002032!3.58e-24!165;CL:0000837!3.58e-24!165;CL:0000988!1.33e-23!182;CL:0000738!6.81e-18!140;CL:0002031!3.22e-16!124;CL:0002087!5.35e-15!119;CL:0000763!3.52e-13!112;CL:0000049!3.52e-13!112;CL:0000066!2.91e-11!254;CL:0000223!3.58e-11!59;CL:0000542!4.54e-11!53;CL:0000051!4.54e-11!53;CL:0000838!1.10e-10!52;CL:0000063!1.43e-07!578;CL:0000084!2.04e-07!25;CL:0000827!2.04e-07!25;CL:0000077!3.45e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.42e-08;25!CL:0000077;1.24e-07;19!CL:0000542;7.17e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.80e-26,168;CL:0002032,3.91e-25,161;CL:0000837,3.91e-25,161;CL:0000988,6.97e-25,177;CL:0000738,1.57e-18,136;CL:0002031,8.77e-17,120;CL:0002087,1.69e-15,115;CL:0000763,1.40e-13,108;CL:0000049,1.40e-13,108;CL:0000223,3.08e-12,58;CL:0000066,3.19e-12,253;CL:0000542,1.38e-11,53;CL:0000051,1.38e-11,53;CL:0000838,3.52e-11,52;CL:0000084,9.77e-08,25;CL:0000827,9.77e-08,25;CL:0000077,1.15e-07,19;CL:0002076,3.61e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.24e-08;30!CL:0000051;7.17e-07;53!CL:0000223;9.31e-07;58 | |||
|ontology_enrichment_disease=DOID:162!3.04e-41!235;DOID:14566!2.40e-38!239;DOID:305!2.21e-29!106;DOID:0050687!1.87e-22!143;DOID:0050686!3.22e-20!137;DOID:2531!2.05e-12!51;DOID:0060083!2.05e-12!51;DOID:1240!2.45e-10!39;DOID:299!4.44e-09!25;DOID:8692!1.15e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:299;1.62e-09;25!DOID:1240;7.60e-09;39!DOID:305;1.21e-08;106!DOID:2531;1.36e-08;51!DOID:0060083;1.36e-08;51!DOID:8692;8.71e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.37e-45,235;DOID:14566,8.73e-43,239;DOID:305,6.65e-32,106;DOID:0050687,8.92e-26,143;DOID:0050686,1.15e-21,137;DOID:2531,5.28e-13,51;DOID:0060083,5.28e-13,51;DOID:1240,8.19e-11,39;DOID:299,1.74e-09,25;DOID:8692,5.34e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.54e-10!129;UBERON:0004185!2.54e-10!129;UBERON:0001041!2.56e-09!98;UBERON:0001007!8.23e-09!155;UBERON:0001555!8.23e-09!155;UBERON:0007026!8.23e-09!155;UBERON:0005911!9.60e-09!82;UBERON:0004119!1.92e-08!169;UBERON:0000925!1.92e-08!169;UBERON:0006595!1.92e-08!169;UBERON:0002390!2.27e-08!102;UBERON:0003061!2.27e-08!102;UBERON:0000077!3.53e-08!130 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.18e-08,82;UBERON:0002390,2.52e-08,98;UBERON:0003061,2.52e-08,98;UBERON:0004921,4.22e-08,118;UBERON:0001041,2.26e-07,87 | |||
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| ||
|short_description=p2@CASP8 | |||
}} | }} |
Latest revision as of 12:53, 19 September 2015
Short description: | p2@CASP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CASP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264275, ENST00000432109, ENST00000471383, ENST00000490682_5end |
EntrezGene: | CASP8 |
HGNC: | 1509 |
UniProt: | Q14790 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.80e-26 | 168 |
hematopoietic oligopotent progenitor cell | 3.91e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.91e-25 | 161 |
hematopoietic cell | 6.97e-25 | 177 |
leukocyte | 1.57e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 8.77e-17 | 120 |
nongranular leukocyte | 1.69e-15 | 115 |
myeloid cell | 1.40e-13 | 108 |
common myeloid progenitor | 1.40e-13 | 108 |
endodermal cell | 3.08e-12 | 58 |
epithelial cell | 3.19e-12 | 253 |
lymphocyte | 1.38e-11 | 53 |
common lymphoid progenitor | 1.38e-11 | 53 |
lymphoid lineage restricted progenitor cell | 3.52e-11 | 52 |
T cell | 9.77e-08 | 25 |
pro-T cell | 9.77e-08 | 25 |
mesothelial cell | 1.15e-07 | 19 |
endo-epithelial cell | 3.61e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 1.18e-08 | 82 |
hematopoietic system | 2.52e-08 | 98 |
blood island | 2.52e-08 | 98 |
subdivision of digestive tract | 4.22e-08 | 118 |
foregut | 2.26e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.37e-45 | 235 |
disease of cellular proliferation | 8.73e-43 | 239 |
carcinoma | 6.65e-32 | 106 |
cell type cancer | 8.92e-26 | 143 |
organ system cancer | 1.15e-21 | 137 |
hematologic cancer | 5.28e-13 | 51 |
immune system cancer | 5.28e-13 | 51 |
leukemia | 8.19e-11 | 39 |
adenocarcinoma | 1.74e-09 | 25 |
myeloid leukemia | 5.34e-08 | 31 |