FFCP PHASE1:Hg19::chr6:6588295..6588313,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:6588295..6588313,+
|short_description=p4@LY86
|description=CAGE_peak_4_at_LY86_5end
|association_with_transcript=-27bp_to_ENST00000379953_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9450 | |EntrezGene=9450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16837 | |HGNC=16837 | ||
|TSSclassifier=strong | |||
|UniProt=O95711 | |UniProt=O95711 | ||
|association_with_transcript=-27bp_to_ENST00000379953_5end | |||
|cluster_id=chr6:6588295..6588313,+ | |||
|coexpression_cluster_id=C203 | |||
|description=CAGE_peak_4_at_LY86_5end | |||
|id=chr6:6588295..6588313,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.44e-21!172;CL:0000566!4.44e-21!172;CL:0002032!6.31e-21!165;CL:0000837!6.31e-21!165;CL:0000763!1.80e-20!112;CL:0000049!1.80e-20!112;CL:0000988!2.23e-19!182;CL:0002009!1.14e-18!65;CL:0000557!1.23e-16!71;CL:0002031!3.93e-16!124;CL:0002194!1.67e-15!63;CL:0000576!1.67e-15!63;CL:0000040!1.67e-15!63;CL:0000559!1.67e-15!63;CL:0000738!1.11e-14!140;CL:0002087!2.57e-14!119;CL:0000839!1.77e-13!70;CL:0000766!4.83e-12!76;CL:0002619!2.83e-10!3;CL:0000840!1.00e-09!5;CL:0001029!1.00e-09!5;CL:0001014!3.43e-08!2;CL:0001016!3.43e-08!2;CL:0000451!6.98e-08!10;CL:0002057!5.50e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.38e-27;3!CL:0000451;7.69e-17;10!CL:0000235;2.94e-14;6!CL:0000840;3.25e-14;5!CL:0001014;3.52e-11;2!CL:0001016;3.52e-11;2!CL:0000990;8.46e-10;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.11e-27,3;CL:0000451,7.48e-17,10;CL:0000840,2.85e-14,5;CL:0001029,2.85e-14,5;CL:0000235,3.04e-14,6;CL:0000037,2.70e-11,168;CL:0001014,2.73e-11,2;CL:0001016,2.73e-11,2;CL:0000988,1.07e-10,177;CL:0000990,7.74e-10,8;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000738,7.10e-09,136;CL:0000763,9.84e-09,108;CL:0000049,9.84e-09,108;CL:0002009,3.84e-08,61;CL:0002031,9.03e-08,120;CL:0000557,1.99e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:74!1.28e-07!2;DOID:8692!2.63e-07!31;DOID:1240!9.03e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.58e-14!86;UBERON:0002371!3.66e-14!80;UBERON:0002390!1.31e-13!102;UBERON:0003061!1.31e-13!102;UBERON:0002193!5.41e-13!112;UBERON:0002405!2.71e-11!115;UBERON:0004765!3.01e-11!101;UBERON:0001434!3.01e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@LY86 | |||
}} | }} |
Latest revision as of 13:15, 19 September 2015
Short description: | p4@LY86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LY86_5end |
Coexpression cluster: | C203_acute_NK_chronic_CD133_lymphoma_immature_Dendritic |
Association with transcript: | -27bp_to_ENST00000379953_5end |
EntrezGene: | LY86 |
HGNC: | 16837 |
UniProt: | O95711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.11e-27 | 3 |
dendritic cell | 7.48e-17 | 10 |
immature conventional dendritic cell | 2.85e-14 | 5 |
common dendritic progenitor | 2.85e-14 | 5 |
macrophage | 3.04e-14 | 6 |
hematopoietic stem cell | 2.70e-11 | 168 |
CD1a-positive Langerhans cell | 2.73e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.73e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
conventional dendritic cell | 7.74e-10 | 8 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
leukocyte | 7.10e-09 | 136 |
myeloid cell | 9.84e-09 | 108 |
common myeloid progenitor | 9.84e-09 | 108 |
macrophage dendritic cell progenitor | 3.84e-08 | 61 |
hematopoietic lineage restricted progenitor cell | 9.03e-08 | 120 |
granulocyte monocyte progenitor cell | 1.99e-07 | 67 |