FFCP PHASE1:Hg19::chr6:66417095..66417098,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=346007 | |EntrezGene=346007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21555 | |HGNC=21555 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T1H1 | |UniProt=Q5T1H1 | ||
|association_with_transcript=8bp_to_ENST00000370618,ENST00000370621,ENST00000489873_5end | |association_with_transcript=8bp_to_ENST00000370618,ENST00000370621,ENST00000489873_5end | ||
|cluster_id=chr6:66417095..66417098,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_6_at_EYS_5end | |description=CAGE_peak_6_at_EYS_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002535!2.43e-07!2;CL:0000242!3.48e-07!2;CL:0002253!4.69e-07!2 | |ontology_enrichment_celltype=CL:0002535!2.43e-07!2;CL:0000242!3.48e-07!2;CL:0002253!4.69e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;8.28e-14;2!CL:0000243;9.24e-07;15!CL:0000125;9.24e-07;15 | |ontology_enrichment_celltype_v019=CL:0002535;8.28e-14;2!CL:0000243;9.24e-07;15!CL:0000125;9.24e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,8.28e-14,2;CL:0000243,9.10e-07,15;CL:0000125,9.10e-07,15;CL:0000030,9.10e-07,15;CL:0000339,9.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.17e-33;3!UBERON:0006238;5.92e-10;10!CL:0000339;9.24e-07;15 | |ontology_enrichment_development_v019=UBERON:0003056;1.17e-33;3!UBERON:0006238;5.92e-10;10!CL:0000339;9.24e-07;15 | ||
|ontology_enrichment_disease=DOID:3119!5.18e-08!14;DOID:154!4.17e-07!2;DOID:4236!4.17e-07!2 | |ontology_enrichment_disease=DOID:3119!5.18e-08!14;DOID:154!4.17e-07!2;DOID:4236!4.17e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3093;3.34e-09;11 | |ontology_enrichment_disease_v019=DOID:3093;3.34e-09;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,3.27e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.44e-25!2;UBERON:0002757!3.44e-25!2;UBERON:0010134!3.44e-25!2;UBERON:0002784!3.44e-25!2;UBERON:0005408!3.44e-25!2;UBERON:0001899!3.44e-25!2;UBERON:0003296!4.24e-13!4;UBERON:0010133!4.24e-13!4;UBERON:0007190!9.73e-13!1;UBERON:0002022!1.09e-12!1;UBERON:0000966!1.86e-10!5;UBERON:0005388!1.86e-10!5;UBERON:0001802!1.86e-10!5;UBERON:0000073!9.84e-09!94;UBERON:0001016!9.84e-09!94;UBERON:0003056!1.18e-08!61;UBERON:0001894!7.30e-08!7;UBERON:0006222!7.30e-08!7;UBERON:0005743!1.11e-07!86;UBERON:0000955!1.74e-07!69;UBERON:0006238!1.74e-07!69;UBERON:0006955!2.43e-07!2;UBERON:0004801!2.43e-07!2;UBERON:0002780!7.02e-07!41;UBERON:0001890!7.02e-07!41;UBERON:0006240!7.02e-07!41 | |ontology_enrichment_uberon=UBERON:0001905!3.44e-25!2;UBERON:0002757!3.44e-25!2;UBERON:0010134!3.44e-25!2;UBERON:0002784!3.44e-25!2;UBERON:0005408!3.44e-25!2;UBERON:0001899!3.44e-25!2;UBERON:0003296!4.24e-13!4;UBERON:0010133!4.24e-13!4;UBERON:0007190!9.73e-13!1;UBERON:0002022!1.09e-12!1;UBERON:0000966!1.86e-10!5;UBERON:0005388!1.86e-10!5;UBERON:0001802!1.86e-10!5;UBERON:0000073!9.84e-09!94;UBERON:0001016!9.84e-09!94;UBERON:0003056!1.18e-08!61;UBERON:0001894!7.30e-08!7;UBERON:0006222!7.30e-08!7;UBERON:0005743!1.11e-07!86;UBERON:0000955!1.74e-07!69;UBERON:0006238!1.74e-07!69;UBERON:0006955!2.43e-07!2;UBERON:0004801!2.43e-07!2;UBERON:0002780!7.02e-07!41;UBERON:0001890!7.02e-07!41;UBERON:0006240!7.02e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0000966;1.15e-20;5!UBERON:0005388;1.15e-20;5!UBERON:0001802;1.15e-20;5!UBERON:0001894;2.47e-15;7!UBERON:0006955;8.28e-14;2!UBERON:0004801;8.28e-14;2!UBERON:0000970;8.27e-12;20!UBERON:0002104;2.80e-11;21!UBERON:0000020;2.34e-10;23!UBERON:0001032;5.92e-10;24!UBERON:0004456;5.92e-10;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0000966;1.15e-20;5!UBERON:0005388;1.15e-20;5!UBERON:0001802;1.15e-20;5!UBERON:0001894;2.47e-15;7!UBERON:0006955;8.28e-14;2!UBERON:0004801;8.28e-14;2!UBERON:0000970;8.27e-12;20!UBERON:0002104;2.80e-11;21!UBERON:0000020;2.34e-10;23!UBERON:0001032;5.92e-10;24!UBERON:0004456;5.92e-10;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0000966,2.38e-17,6;UBERON:0005388,2.38e-17,6;UBERON:0001802,2.38e-17,6;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0006955,8.28e-14,2;UBERON:0004801,8.28e-14,2;UBERON:0000970,2.90e-11,21;UBERON:0002104,2.90e-11,21;UBERON:0000020,6.10e-10,24;UBERON:0001032,6.10e-10,24;UBERON:0004456,6.10e-10,24;UBERON:0001016,5.74e-07,89;UBERON:0003056,7.88e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27512572210559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.798532254171,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79052119825112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,5.35701835878287,7.0619581665953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00067161847319,2.21219056425817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27512572210559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.798532254171,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79052119825112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,5.35701835878287,7.0619581665953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00067161847319,2.21219056425817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@EYS | |short_description=p6@EYS | ||
}} | }} |
Latest revision as of 13:26, 19 September 2015
Short description: | p6@EYS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EYS_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 8bp_to_ENST00000370618, ENST00000370621, ENST00000489873_5end |
EntrezGene: | EYS |
HGNC: | 21555 |
UniProt: | Q5T1H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 8.28e-14 | 2 |
glial cell (sensu Vertebrata) | 9.10e-07 | 15 |
glial cell | 9.10e-07 | 15 |
glioblast | 9.10e-07 | 15 |
glioblast (sensu Vertebrata) | 9.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
retina | 2.38e-17 | 6 |
photoreceptor array | 2.38e-17 | 6 |
posterior segment of eyeball | 2.38e-17 | 6 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
uterine epithelium | 8.28e-14 | 2 |
cervix epithelium | 8.28e-14 | 2 |
eye | 2.90e-11 | 21 |
visual system | 2.90e-11 | 21 |
sense organ | 6.10e-10 | 24 |
sensory system | 6.10e-10 | 24 |
entire sense organ system | 6.10e-10 | 24 |
nervous system | 5.74e-07 | 89 |
pre-chordal neural plate | 7.88e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.27e-09 | 11 |