FFCP PHASE1:Hg19::chr8:96145942..96145954,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:96145942..96145954,+ to FFCP PHASE1:Hg19::chr8:96145942..96145954,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79666 | |EntrezGene=79666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20757 | |HGNC=20757 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H8W4 | |UniProt=Q9H8W4 | ||
|association_with_transcript=0bp_to_NM_024613_5end | |||
|cluster_id=chr8:96145942..96145954,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_PLEKHF2_5end | |||
|id=chr8:96145942..96145954,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.26e-25!172;CL:0000566!6.26e-25!172;CL:0000738!1.77e-24!140;CL:0002032!3.20e-23!165;CL:0000837!3.20e-23!165;CL:0000766!5.27e-23!76;CL:0000763!5.30e-22!112;CL:0000049!5.30e-22!112;CL:0000988!6.81e-22!182;CL:0000839!1.91e-21!70;CL:0002031!3.91e-21!124;CL:0000557!1.59e-20!71;CL:0002087!5.51e-19!119;CL:0002009!8.38e-19!65;CL:0002057!3.67e-18!42;CL:0002194!4.19e-18!63;CL:0000576!4.19e-18!63;CL:0000040!4.19e-18!63;CL:0000559!4.19e-18!63;CL:0000860!6.77e-17!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.55e-40;33!CL:0002057;4.55e-40;33!CL:0000473;3.05e-32;39!CL:0000234;3.05e-32;39!CL:0000576;1.11e-23;48!CL:0000766;3.07e-21;69!CL:0000763;2.58e-11;100!CL:0000738;5.26e-10;136!CL:0002087;1.99e-09;104!CL:0000236;4.71e-09;13!CL:0000097;4.42e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.87e-42,72;CL:0000860,9.67e-39,42;CL:0002057,9.67e-39,42;CL:0000839,4.56e-38,66;CL:0000473,7.66e-38,48;CL:0000234,7.66e-38,48;CL:0000557,1.88e-35,67;CL:0000738,8.36e-34,136;CL:0002194,2.20e-32,59;CL:0000576,2.20e-32,59;CL:0000040,2.20e-32,59;CL:0000559,2.20e-32,59;CL:0002009,5.63e-31,61;CL:0002031,1.09e-29,120;CL:0000037,1.27e-28,168;CL:0002087,4.63e-28,115;CL:0000763,9.07e-28,108;CL:0000049,9.07e-28,108;CL:0000988,2.84e-26,177;CL:0002032,5.79e-26,161;CL:0000837,5.79e-26,161;CL:0000134,5.88e-09,354;CL:0002320,1.83e-08,361;CL:0000236,2.29e-08,14;CL:0000219,4.88e-08,386;CL:0000097,4.38e-07,5;CL:0002028,4.38e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-28;42!CL:0000049;2.43e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;5.17e-08;4!DOID:1612;5.17e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.58e-08,4;DOID:1612,6.58e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.40e-20!102;UBERON:0003061!1.40e-20!102;UBERON:0002193!2.16e-19!112;UBERON:0002371!5.46e-17!80;UBERON:0001474!5.71e-16!86;UBERON:0004765!1.06e-13!101;UBERON:0001434!1.06e-13!101;UBERON:0007023!1.24e-13!115;UBERON:0002405!1.01e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.01e-38,98;UBERON:0003061,1.01e-38,98;UBERON:0002193,2.21e-35,108;UBERON:0002371,1.30e-31,76;UBERON:0002405,1.73e-29,93;UBERON:0001474,2.05e-28,82;UBERON:0004765,8.06e-25,90;UBERON:0001434,3.75e-21,100;UBERON:0003081,1.33e-17,203;UBERON:0002204,3.13e-10,167;UBERON:0000926,1.86e-08,315;UBERON:0004120,1.86e-08,315;UBERON:0006603,1.86e-08,315;UBERON:0002384,3.05e-08,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,1.34088328328186,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0.612002073732759,0,0,0.273748850145768,0.125542639594803,0.687720651731561,0.656804715599566,0.550975469195755,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,2.16908161624845,0.284338464974843,1.46800219667424,0,3.00816671205213,1.08505435357926,2.46307021663917,0.971680998056939,3.60605794687861,1.74477886535478,1.51150377475524,1.4555043671269,3.71886459049095,2.87817521615278,3.09706370895104,1.7261543539329,2.30544635876191,1.89185783910868,4.13694816883942,8.39130088658974,9.47985406160392,1.88242339542605,0.818718450173537,1.57306439111559,5.20342617030534,2.88836124368484,10.8687311385837,1.64925650093358,1.19678194572979,1.27867425159808,13.3496249769149,14.7520158419696,13.0792672289071,1.7587406567972,2.60741459210101,1.73751075764093,18.7673845816344,12.5214396235772,12.9749578850763,0.211255286311942,0.850417199860174,0.419317291016752,0.22465726229299,0.750884464207532,0.48217676009124,0,0.19891667719909,0.730656615058536,5.27988733383968,3.27683166757279,4.44754626931777,6.82768356106412,4.80475184443215,1.14950487990897,5.2883589822789,1.90810750907073,0.569212969109448,0,0.764546456250458,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,0,1.30368906653436,0,0,0.111410456885174,0.294605907474837,0.664601683750863,0.270803863765016,0.25618263945135,0,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0.511946444617674,0,0,0.821127996921047,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.785874452986276,0,0,0.97364218096405,0.174129737299267,0.664789802594326,0.238490624305342,0,0.74291500265913,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0.673588117878509,0.225222960966644,0,0,0.183201743930407,1.31780417436063,7.75560528296651,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0.822041490506354,0.647491777472526,0,0.204154171254893,0,0.516628905878827,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.831192346452549,0.438977620880838,0,0.300476117813194,0.226864366320042,0,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0.323292113637624,0,0.403008392910561,0.508681776931463,0.193260853163297,0.545492241181669,0,0,0.265059536642971,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0.928735856063958,0,0.354920400119532,0.168584690078102,0.964044119533928,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,1.26755034821831,0,0,0.441463099414651,0,0.343135620597051,0.548751427043128,1.1240175325762,0.201057944823262,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.190254152234598,1.58040879591855,3.43394464837949,0.738651018262192,0.936017060556951,0.891786973732369,0,0.335964256397719,0.567100388969546,0,0,0.383382679165211,0.492663237895943,1.32072651019839,10.7810620081201,4.32359860250884,9.59442494040488,0.698476837213859,0,1.17217447210047,0,0.514137463516618,0.300343057843917,1.14330573052231,0,0,0.2933531432838,0,0,0.845302752556,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,6.08118903205952,3.01354254859276,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.394061520403854,0.862510299438069,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,2.99602809578873,0,1.24324654030811,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0,1.03384013061444,1.2942852049117,1.06727557803444,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.348631135379878,0.362578348774867,0.200506470303285,0.184161977871793,0.229628896329213,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0,0.877039506583738,1.0457418040996,0,0,0,0.515205058238611,0.0915694648183434,0.495056999523528,0,0,1.6068392984416,0.386682873168488,0.462145851343933,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.495854746082934,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0.855877976067841,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0.545999645631943,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0.658589785919804,0,0,0.384888450902048,0,0,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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,1.34088328328186,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0.612002073732759,0,0,0.273748850145768,0.125542639594803,0.687720651731561,0.656804715599566,0.550975469195755,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,2.16908161624845,0.284338464974843,1.46800219667424,0,3.00816671205213,1.08505435357926,2.46307021663917,0.971680998056939,3.60605794687861,1.74477886535478,1.51150377475524,1.4555043671269,3.71886459049095,2.87817521615278,3.09706370895104,1.7261543539329,2.30544635876191,1.89185783910868,4.13694816883942,8.39130088658974,9.47985406160392,1.88242339542605,0.818718450173537,1.57306439111559,5.20342617030534,2.88836124368484,10.8687311385837,1.64925650093358,1.19678194572979,1.27867425159808,13.3496249769149,14.7520158419696,13.0792672289071,1.7587406567972,2.60741459210101,1.73751075764093,18.7673845816344,12.5214396235772,12.9749578850763,0.211255286311942,0.850417199860174,0.419317291016752,0.22465726229299,0.750884464207532,0.48217676009124,0,0.19891667719909,0.730656615058536,5.27988733383968,3.27683166757279,4.44754626931777,6.82768356106412,4.80475184443215,1.14950487990897,5.2883589822789,1.90810750907073,0.569212969109448,0,0.764546456250458,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,0,1.30368906653436,0,0,0.111410456885174,0.294605907474837,0.664601683750863,0.270803863765016,0.25618263945135,0,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0.511946444617674,0,0,0.821127996921047,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.785874452986276,0,0,0.97364218096405,0.174129737299267,0.664789802594326,0.238490624305342,0,0.74291500265913,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0.673588117878509,0.225222960966644,0,0,0.183201743930407,1.31780417436063,7.75560528296651,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0.822041490506354,0.647491777472526,0,0.204154171254893,0,0.516628905878827,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.831192346452549,0.438977620880838,0,0.300476117813194,0.226864366320042,0,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0.323292113637624,0,0.403008392910561,0.508681776931463,0.193260853163297,0.545492241181669,0,0,0.265059536642971,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0.928735856063958,0,0.354920400119532,0.168584690078102,0.964044119533928,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,1.26755034821831,0,0,0.441463099414651,0,0.343135620597051,0.548751427043128,1.1240175325762,0.201057944823262,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.190254152234598,1.58040879591855,3.43394464837949,0.738651018262192,0.936017060556951,0.891786973732369,0,0.335964256397719,0.567100388969546,0,0,0.383382679165211,0.492663237895943,1.32072651019839,10.7810620081201,4.32359860250884,9.59442494040488,0.698476837213859,0,1.17217447210047,0,0.514137463516618,0.300343057843917,1.14330573052231,0,0,0.2933531432838,0,0,0.845302752556,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,6.08118903205952,3.01354254859276,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.394061520403854,0.862510299438069,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,2.99602809578873,0,1.24324654030811,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0,1.03384013061444,1.2942852049117,1.06727557803444,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.348631135379878,0.362578348774867,0.200506470303285,0.184161977871793,0.229628896329213,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0,0.877039506583738,1.0457418040996,0,0,0,0.515205058238611,0.0915694648183434,0.495056999523528,0,0,1.6068392984416,0.386682873168488,0.462145851343933,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.495854746082934,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0.855877976067841,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0.545999645631943,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0.658589785919804,0,0,0.384888450902048,0,0,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| ||
|short_description=p6@PLEKHF2 | |||
}} | }} |
Latest revision as of 13:48, 19 September 2015
Short description: | p6@PLEKHF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLEKHF2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_NM_024613_5end |
EntrezGene: | PLEKHF2 |
HGNC: | 20757 |
UniProt: | Q9H8W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.87e-42 | 72 |
classical monocyte | 9.67e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.67e-39 | 42 |
myeloid lineage restricted progenitor cell | 4.56e-38 | 66 |
defensive cell | 7.66e-38 | 48 |
phagocyte | 7.66e-38 | 48 |
granulocyte monocyte progenitor cell | 1.88e-35 | 67 |
leukocyte | 8.36e-34 | 136 |
monopoietic cell | 2.20e-32 | 59 |
monocyte | 2.20e-32 | 59 |
monoblast | 2.20e-32 | 59 |
promonocyte | 2.20e-32 | 59 |
macrophage dendritic cell progenitor | 5.63e-31 | 61 |
hematopoietic lineage restricted progenitor cell | 1.09e-29 | 120 |
hematopoietic stem cell | 1.27e-28 | 168 |
nongranular leukocyte | 4.63e-28 | 115 |
myeloid cell | 9.07e-28 | 108 |
common myeloid progenitor | 9.07e-28 | 108 |
hematopoietic cell | 2.84e-26 | 177 |
hematopoietic oligopotent progenitor cell | 5.79e-26 | 161 |
hematopoietic multipotent progenitor cell | 5.79e-26 | 161 |
mesenchymal cell | 5.88e-09 | 354 |
connective tissue cell | 1.83e-08 | 361 |
B cell | 2.29e-08 | 14 |
motile cell | 4.88e-08 | 386 |
mast cell | 4.38e-07 | 5 |
basophil mast progenitor cell | 4.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.01e-38 | 98 |
blood island | 1.01e-38 | 98 |
hemolymphoid system | 2.21e-35 | 108 |
bone marrow | 1.30e-31 | 76 |
immune system | 1.73e-29 | 93 |
bone element | 2.05e-28 | 82 |
skeletal element | 8.06e-25 | 90 |
skeletal system | 3.75e-21 | 100 |
lateral plate mesoderm | 1.33e-17 | 203 |
musculoskeletal system | 3.13e-10 | 167 |
mesoderm | 1.86e-08 | 315 |
mesoderm-derived structure | 1.86e-08 | 315 |
presumptive mesoderm | 1.86e-08 | 315 |
connective tissue | 3.05e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.58e-08 | 4 |
breast cancer | 6.58e-08 | 4 |