FFCP PHASE1:Hg19::chr14:24701644..24701730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51292 | |EntrezGene=51292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4377 | |HGNC=4377 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2T1,Q6PKC0 | |UniProt=Q9P2T1,Q6PKC0 | ||
|association_with_transcript=0bp_to_ENST00000421944,ENST00000559836,ENST00000561038,NM_001002000,NM_001002001,uc001wnq.1,uc001wnr.2,uc001wns.2,uc001wnt.2,uc001wnu.2,uc001wnv.2_5end | |association_with_transcript=0bp_to_ENST00000421944,ENST00000559836,ENST00000561038,NM_001002000,NM_001002001,uc001wnq.1,uc001wnr.2,uc001wns.2,uc001wnt.2,uc001wnu.2,uc001wnv.2_5end | ||
|cluster_id=chr14:24701644..24701730,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_GMPR2_5end | |description=CAGE_peak_4_at_GMPR2_5end | ||
|id=chr14:24701644..24701730,+ | |id=chr14:24701644..24701730,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.17e-12!42;CL:0000860!7.40e-12!45;CL:0000766!1.99e-10!76;CL:0002139!3.29e-09!24;CL:0002194!2.31e-08!63;CL:0000576!2.31e-08!63;CL:0000040!2.31e-08!63;CL:0000559!2.31e-08!63;CL:0000839!2.43e-08!70;CL:0000222!2.55e-08!119;CL:0002009!5.35e-08!65;CL:0000557!1.04e-07!71;CL:0000213!1.75e-07!57;CL:0000215!1.75e-07!57;CL:0000763!2.77e-07!112;CL:0000049!2.77e-07!112;CL:0000071!4.62e-07!18;CL:0002546!4.62e-07!18 | |ontology_enrichment_celltype=CL:0002057!6.17e-12!42;CL:0000860!7.40e-12!45;CL:0000766!1.99e-10!76;CL:0002139!3.29e-09!24;CL:0002194!2.31e-08!63;CL:0000576!2.31e-08!63;CL:0000040!2.31e-08!63;CL:0000559!2.31e-08!63;CL:0000839!2.43e-08!70;CL:0000222!2.55e-08!119;CL:0002009!5.35e-08!65;CL:0000557!1.04e-07!71;CL:0000213!1.75e-07!57;CL:0000215!1.75e-07!57;CL:0000763!2.77e-07!112;CL:0000049!2.77e-07!112;CL:0000071!4.62e-07!18;CL:0002546!4.62e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.36e-12;33!CL:0002057;6.36e-12;33!CL:0002139;1.43e-09;24!CL:0000473;1.80e-08;39!CL:0000234;1.80e-08;39!CL:0000071;1.84e-07;18!CL:0000576;3.04e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.04e-12,42;CL:0002057,6.04e-12,42;CL:0000766,1.46e-10,72;CL:0000473,6.17e-10,48;CL:0000234,6.17e-10,48;CL:0002139,3.24e-09,24;CL:0002194,1.74e-08,59;CL:0000576,1.74e-08,59;CL:0000040,1.74e-08,59;CL:0000559,1.74e-08,59;CL:0000839,1.97e-08,66;CL:0000222,4.49e-08,121;CL:0002009,4.65e-08,61;CL:0000557,9.73e-08,67;CL:0000213,1.05e-07,58;CL:0000215,1.05e-07,58;CL:0000763,3.21e-07,108;CL:0000049,3.21e-07,108;CL:0000071,4.56e-07,18;CL:0002546,4.56e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;6.36e-09;42!CL:0002546;1.84e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.25e-19!216;UBERON:0000926!2.29e-11!448;UBERON:0004120!2.29e-11!448;UBERON:0006603!2.29e-11!448;UBERON:0002193!4.99e-11!112;UBERON:0002390!7.20e-11!102;UBERON:0003061!7.20e-11!102;UBERON:0004535!7.90e-11!110;UBERON:0001009!4.22e-10!113;UBERON:0004872!1.03e-09!84;UBERON:0002204!1.56e-09!167;UBERON:0000055!1.78e-09!69;UBERON:0001981!3.56e-09!60;UBERON:0007500!3.56e-09!60;UBERON:0004537!3.56e-09!60;UBERON:0006965!3.56e-09!60;UBERON:0002371!1.72e-08!80;UBERON:0001637!8.38e-08!42;UBERON:0003509!8.38e-08!42;UBERON:0004572!8.38e-08!42;UBERON:0002049!9.57e-08!79;UBERON:0007798!9.57e-08!79;UBERON:0001474!1.22e-07!86;UBERON:0003914!2.11e-07!118;UBERON:0004765!2.47e-07!101;UBERON:0001434!2.47e-07!101;UBERON:0001986!4.62e-07!18;UBERON:0004638!4.62e-07!18;UBERON:0004852!4.62e-07!18;UBERON:0006914!4.63e-07!25;UBERON:0000487!7.19e-07!22 | |ontology_enrichment_uberon=UBERON:0003081!3.25e-19!216;UBERON:0000926!2.29e-11!448;UBERON:0004120!2.29e-11!448;UBERON:0006603!2.29e-11!448;UBERON:0002193!4.99e-11!112;UBERON:0002390!7.20e-11!102;UBERON:0003061!7.20e-11!102;UBERON:0004535!7.90e-11!110;UBERON:0001009!4.22e-10!113;UBERON:0004872!1.03e-09!84;UBERON:0002204!1.56e-09!167;UBERON:0000055!1.78e-09!69;UBERON:0001981!3.56e-09!60;UBERON:0007500!3.56e-09!60;UBERON:0004537!3.56e-09!60;UBERON:0006965!3.56e-09!60;UBERON:0002371!1.72e-08!80;UBERON:0001637!8.38e-08!42;UBERON:0003509!8.38e-08!42;UBERON:0004572!8.38e-08!42;UBERON:0002049!9.57e-08!79;UBERON:0007798!9.57e-08!79;UBERON:0001474!1.22e-07!86;UBERON:0003914!2.11e-07!118;UBERON:0004765!2.47e-07!101;UBERON:0001434!2.47e-07!101;UBERON:0001986!4.62e-07!18;UBERON:0004638!4.62e-07!18;UBERON:0004852!4.62e-07!18;UBERON:0006914!4.63e-07!25;UBERON:0000487!7.19e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.84e-07;18!UBERON:0001986;1.84e-07;18!UBERON:0004852;1.84e-07;18!UBERON:0006914;3.56e-07;25!UBERON:0000487;3.75e-07;22 | |||
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| ||
|short_description=p4@GMPR2 | |short_description=p4@GMPR2 | ||
}} | }} |
Latest revision as of 13:56, 19 September 2015
Short description: | p4@GMPR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GMPR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000421944, ENST00000559836, ENST00000561038, NM_001002000, NM_001002001, uc001wnq.1, uc001wnr.2, uc001wns.2, uc001wnt.2, uc001wnu.2, uc001wnv.2_5end |
EntrezGene: | GMPR2 |
HGNC: | 4377 |
UniProt: | Q9P2T1Q6PKC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.04e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.04e-12 | 42 |
myeloid leukocyte | 1.46e-10 | 72 |
defensive cell | 6.17e-10 | 48 |
phagocyte | 6.17e-10 | 48 |
endothelial cell of vascular tree | 3.24e-09 | 24 |
monopoietic cell | 1.74e-08 | 59 |
monocyte | 1.74e-08 | 59 |
monoblast | 1.74e-08 | 59 |
promonocyte | 1.74e-08 | 59 |
myeloid lineage restricted progenitor cell | 1.97e-08 | 66 |
mesodermal cell | 4.49e-08 | 121 |
macrophage dendritic cell progenitor | 4.65e-08 | 61 |
granulocyte monocyte progenitor cell | 9.73e-08 | 67 |
lining cell | 1.05e-07 | 58 |
barrier cell | 1.05e-07 | 58 |
myeloid cell | 3.21e-07 | 108 |
common myeloid progenitor | 3.21e-07 | 108 |
blood vessel endothelial cell | 4.56e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.56e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 7.21e-20 | 203 |
mesoderm | 9.83e-15 | 315 |
mesoderm-derived structure | 9.83e-15 | 315 |
presumptive mesoderm | 9.83e-15 | 315 |
cardiovascular system | 4.33e-11 | 109 |
hemolymphoid system | 4.67e-11 | 108 |
hematopoietic system | 7.01e-11 | 98 |
blood island | 7.01e-11 | 98 |
circulatory system | 2.33e-10 | 112 |
splanchnic layer of lateral plate mesoderm | 5.79e-10 | 83 |
vessel | 8.53e-10 | 68 |
epithelial tube open at both ends | 1.78e-09 | 59 |
blood vessel | 1.78e-09 | 59 |
blood vasculature | 1.78e-09 | 59 |
vascular cord | 1.78e-09 | 59 |
musculoskeletal system | 4.97e-09 | 167 |
bone marrow | 1.62e-08 | 76 |
vasculature | 5.38e-08 | 78 |
vascular system | 5.38e-08 | 78 |
skeletal element | 6.17e-08 | 90 |
immune system | 6.47e-08 | 93 |
epithelial tube | 7.64e-08 | 117 |
artery | 9.03e-08 | 42 |
arterial blood vessel | 9.03e-08 | 42 |
arterial system | 9.03e-08 | 42 |
bone element | 1.19e-07 | 82 |
skeletal system | 2.94e-07 | 100 |
blood vessel endothelium | 4.56e-07 | 18 |
endothelium | 4.56e-07 | 18 |
cardiovascular system endothelium | 4.56e-07 | 18 |
squamous epithelium | 4.57e-07 | 25 |
simple squamous epithelium | 7.11e-07 | 22 |