FFCP PHASE1:Hg19::chr6:105624123..105624136,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64208 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=17649 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_024539,uc003pra.2_5end | |||
|cluster_id=chr6:105624123..105624136,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_2_at_POPDC3_5end | |||
|id=chr6:105624123..105624136,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.92e-08!235;DOID:14566!9.34e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.33e-13;1!DOID:3350;1.93e-07;2!DOID:1036;4.69e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.25e-13,1;DOID:3350,1.87e-07,2;DOID:1036,4.69e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.85e-12;10!UBERON:0000178;2.85e-08;15!UBERON:0000179;2.85e-08;15!UBERON:0000463;2.85e-08;15!UBERON:0000473;4.02e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.85e-12,10;UBERON:0000358,3.85e-12,10;UBERON:0000307,3.85e-12,10;UBERON:0000091,3.85e-12,10;UBERON:0000087,3.85e-12,10;UBERON:0007010,3.85e-12,10;UBERON:0007806,3.85e-12,10;UBERON:0008780,3.85e-12,10;UBERON:0005728,3.85e-12,10;UBERON:0000178,2.85e-08,15;UBERON:0000179,2.85e-08,15;UBERON:0000463,2.85e-08,15;UBERON:0000473,3.90e-07,8 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0,0.667396566847634,0,0,0,1.08182271390393,0,0,0,0,0.242721043499027,0.222886768554957,0,0,0,0,0,0,0.445234820091624,1.15362711958732,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718061155278177,0,0,0,0,0,0,0,1.1279783030859,0.19606253431774,1.67821586975843,0,0,0,0,0,0,0,0,0,41.8094791439677,37.9341292565764,36.1299945288876,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,1.54787429224455,0,0,0,0,0,0,0,0.596143835108969,0.0633107959558787,0,0,0,0,0,0,0,0,6.70963692053336,0.235694034616795,0,0,0.509991088181609,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26720403823288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,5.98803932595153,0,0,0,0,0,3.95223263795889,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0.310874401165561,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0.734210113519403,0,0,0,0.353378291891762,0,0.675769762612291,0,0,0.607719912354764,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91841556955478,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0.981477185010256,21.9423685426797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.342976018874837,0.203909198930495,0.0657727735628491,0.590969204419841,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.240724100067505,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,3.63737751447549,1.60778478093707,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p2@POPDC3 | |||
}} |
Latest revision as of 14:08, 19 September 2015
Short description: | p2@POPDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_POPDC3_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 0bp_to_NR_024539, uc003pra.2_5end |
EntrezGene: | POPDC3 |
HGNC: | 17649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.85e-12 | 10 |
blastocyst | 3.85e-12 | 10 |
blastula | 3.85e-12 | 10 |
bilaminar disc | 3.85e-12 | 10 |
inner cell mass | 3.85e-12 | 10 |
cleaving embryo | 3.85e-12 | 10 |
connecting stalk | 3.85e-12 | 10 |
inner cell mass derived epiblast | 3.85e-12 | 10 |
extraembryonic mesoderm | 3.85e-12 | 10 |
blood | 2.85e-08 | 15 |
haemolymphatic fluid | 2.85e-08 | 15 |
organism substance | 2.85e-08 | 15 |
testis | 3.90e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.25e-13 | 1 |
mesenchymal cell neoplasm | 1.87e-07 | 2 |
chronic leukemia | 4.69e-07 | 8 |