FFCP PHASE1:Hg19::chr18:43246002..43246009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q15849 | |UniProt=Q15849 | ||
|association_with_transcript=-97bp_to_X96969_5end | |association_with_transcript=-97bp_to_X96969_5end | ||
|cluster_id=chr18:43246002..43246009,+ | |||
|coexpression_cluster_id=C121 | |coexpression_cluster_id=C121 | ||
|description=CAGE_peak_2_at_X96969_5end | |description=CAGE_peak_2_at_X96969_5end | ||
|id=chr18:43246002..43246009,+ | |id=chr18:43246002..43246009,+ | ||
|ontology_enrichment_celltype=CL:0002127;1.46e-50;1!CL:0000911;1.46e-50;1!CL:0000814;1.46e-50;1!CL:0000084;1.09e-18;25!CL:0000542;4.70e-11;53 | |ontology_enrichment_celltype=CL:0000037!4.06e-11!172;CL:0000566!4.06e-11!172;CL:0002032!1.68e-10!165;CL:0000837!1.68e-10!165;CL:0000988!2.96e-10!182;CL:0000990!3.45e-10!8;CL:0000451!2.36e-08!10;CL:0000738!5.75e-08!140;CL:0002127!2.09e-07!1;CL:0000914!2.09e-07!1;CL:0000911!2.09e-07!1;CL:0000814!2.09e-07!1;CL:0002042!2.09e-07!1;CL:0002039!2.09e-07!1;CL:0002040!2.09e-07!1;CL:0002041!2.09e-07!1;CL:0000542!2.91e-07!53;CL:0000051!2.91e-07!53 | ||
| | |ontology_enrichment_celltype_v019=CL:0002127;1.46e-50;1!CL:0000911;1.46e-50;1!CL:0000814;1.46e-50;1!CL:0000084;1.09e-18;25!CL:0000542;4.70e-11;53 | ||
|ontology_enrichment_disease=DOID:12603;3.99e-50;1!DOID:1240;9.00e-15;39!DOID:2531;7.68e-13;51!DOID:0060083;7.68e-13;51!DOID:1036;1.69e-07;8 | |ontology_enrichment_celltype_v019_2=CL:0002127,1.46e-50,1;CL:0000914,1.46e-50,1;CL:0000911,1.46e-50,1;CL:0000814,1.46e-50,1;CL:0002042,1.46e-50,1;CL:0002039,1.46e-50,1;CL:0002040,1.46e-50,1;CL:0002041,1.46e-50,1;CL:0000893,4.32e-26,2;CL:0002489,4.32e-26,2;CL:0000809,4.32e-26,2;CL:0000808,4.32e-26,2;CL:0000894,4.32e-26,2;CL:0000806,4.32e-26,2;CL:0000807,4.32e-26,2;CL:0000805,4.32e-26,2;CL:0002425,4.32e-26,2;CL:0000084,1.15e-18,25;CL:0000827,1.15e-18,25;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0000838,1.83e-09,52;CL:0002087,1.17e-07,115 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002425;4.32e-26;2!CL:0000051;4.70e-11;53 | ||
|ontology_enrichment_disease=DOID:2531!1.94e-16!51;DOID:0060083!1.94e-16!51;DOID:1240!7.98e-16!39;DOID:12603!2.22e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:12603;3.99e-50;1!DOID:1240;9.00e-15;39!DOID:2531;7.68e-13;51!DOID:0060083;7.68e-13;51!DOID:1036;1.69e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.42e-50,1;DOID:1240,4.38e-21,39;DOID:2531,2.36e-16,51;DOID:0060083,2.36e-16,51;DOID:1036,1.80e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001000!3.78e-07!1;UBERON:0005352!3.78e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.82e-14,4;UBERON:0005058,8.82e-14,4;UBERON:0009113,8.82e-14,4;UBERON:0003295,8.82e-14,4;UBERON:0005562,8.82e-14,4;UBERON:0003351,1.22e-09,6;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7 | |||
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|short_description=p2@X96969 | |short_description=p2@X96969 | ||
}} | }} |
Latest revision as of 14:26, 19 September 2015
Short description: | p2@X96969 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_X96969_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | -97bp_to_X96969_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.46e-50 | 1 |
immature NK T cell | 1.46e-50 | 1 |
effector T cell | 1.46e-50 | 1 |
mature NK T cell | 1.46e-50 | 1 |
immature NK T cell stage IV | 1.46e-50 | 1 |
immature NK T cell stage I | 1.46e-50 | 1 |
immature NK T cell stage II | 1.46e-50 | 1 |
immature NK T cell stage III | 1.46e-50 | 1 |
thymocyte | 4.32e-26 | 2 |
double negative thymocyte | 4.32e-26 | 2 |
double-positive, alpha-beta thymocyte | 4.32e-26 | 2 |
DN4 thymocyte | 4.32e-26 | 2 |
DN1 thymic pro-T cell | 4.32e-26 | 2 |
DN2 thymocyte | 4.32e-26 | 2 |
DN3 thymocyte | 4.32e-26 | 2 |
immature single positive thymocyte | 4.32e-26 | 2 |
early T lineage precursor | 4.32e-26 | 2 |
T cell | 1.15e-18 | 25 |
pro-T cell | 1.15e-18 | 25 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.83e-09 | 52 |
nongranular leukocyte | 1.17e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.82e-14 | 4 |
hemolymphoid system gland | 8.82e-14 | 4 |
thymic region | 8.82e-14 | 4 |
pharyngeal gland | 8.82e-14 | 4 |
thymus primordium | 8.82e-14 | 4 |
pharyngeal epithelium | 1.22e-09 | 6 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.42e-50 | 1 |
leukemia | 4.38e-21 | 39 |
hematologic cancer | 2.36e-16 | 51 |
immune system cancer | 2.36e-16 | 51 |
chronic leukemia | 1.80e-07 | 8 |