FFCP PHASE1:Hg19::chr12:57872106..57872126,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:57872106..57872126,- to FFCP PHASE1:Hg19::chr12:57872106..57872126,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64333 | |EntrezGene=64333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14130 | |HGNC=14130 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548148_5end | |||
|cluster_id=chr12:57872106..57872126,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_8_at_ARHGAP9_5end | |||
|id=chr12:57872106..57872126,- | |||
|ontology_enrichment_celltype=CL:0000037!4.76e-37!172;CL:0000566!4.76e-37!172;CL:0000738!1.08e-34!140;CL:0002032!7.47e-34!165;CL:0000837!7.47e-34!165;CL:0000988!8.75e-34!182;CL:0000838!5.99e-29!52;CL:0000542!3.42e-28!53;CL:0000051!3.42e-28!53;CL:0002031!2.64e-25!124;CL:0002087!7.44e-25!119;CL:0000084!4.10e-21!25;CL:0000827!4.10e-21!25;CL:0000791!5.03e-20!18;CL:0000789!5.03e-20!18;CL:0002420!5.03e-20!18;CL:0002419!5.03e-20!18;CL:0000790!5.03e-20!18;CL:0000624!1.25e-11!6;CL:0000763!1.15e-10!112;CL:0000049!1.15e-10!112;CL:0000625!1.32e-09!11;CL:0000134!6.03e-09!358;CL:0002320!2.05e-08!365;CL:0002274!2.72e-08!5;CL:0000457!2.72e-08!5;CL:0002191!2.72e-08!5;CL:0000097!2.72e-08!5;CL:0000831!2.72e-08!5;CL:0002028!2.72e-08!5;CL:0000766!1.24e-07!76;CL:0000623!5.58e-07!3;CL:0000825!5.58e-07!3;CL:0000945!8.35e-07!24;CL:0000826!8.35e-07!24;CL:0000767!9.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;8.66e-24;6!CL:0000791;1.86e-19;18!CL:0000789;1.86e-19;18!CL:0002419;1.86e-19;18!CL:0000623;1.18e-18;3!CL:0000767;5.78e-18;3!CL:0000226;3.53e-17;3!CL:0000842;3.53e-17;3!CL:0000084;3.89e-17;25!CL:0000815;4.77e-12;2!CL:0000792;4.77e-12;2!CL:0002677;4.77e-12;2!CL:0000094;1.06e-11;8!CL:0000542;2.52e-09;53!CL:0000081;1.56e-08;11!CL:0000898;2.55e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.02e-24,6;CL:0000791,1.67e-19,18;CL:0000789,1.67e-19,18;CL:0002420,1.67e-19,18;CL:0002419,1.67e-19,18;CL:0000790,1.67e-19,18;CL:0000623,1.22e-18,3;CL:0000825,1.22e-18,3;CL:0000767,6.88e-18,3;CL:0000226,3.34e-17,3;CL:0000842,3.34e-17,3;CL:0000084,4.14e-17,25;CL:0000827,4.14e-17,25;CL:0000738,5.58e-17,136;CL:0000838,5.18e-16,52;CL:0000542,1.17e-15,53;CL:0000051,1.17e-15,53;CL:0002087,1.73e-13,115;CL:0000037,7.85e-13,168;CL:0000815,3.92e-12,2;CL:0000792,3.92e-12,2;CL:0002677,3.92e-12,2;CL:0000988,6.19e-12,177;CL:0000094,1.07e-11,8;CL:0002032,9.84e-10,161;CL:0000837,9.84e-10,161;CL:0002031,1.25e-08,120;CL:0000081,1.57e-08,11;CL:0000898,2.24e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.86e-19;18!CL:0000051;2.52e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!2.19e-07!51;DOID:0060083!2.19e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-11!102;UBERON:0003061!1.10e-11!102;UBERON:0002193!1.49e-10!112;UBERON:0000178!2.91e-10!15;UBERON:0000179!2.91e-10!15;UBERON:0000463!2.91e-10!15;UBERON:0004177!5.41e-08!7;UBERON:0002384!1.07e-07!375;UBERON:0002370!1.98e-07!4;UBERON:0005058!1.98e-07!4;UBERON:0009113!1.98e-07!4;UBERON:0003295!1.98e-07!4;UBERON:0005562!1.98e-07!4;UBERON:0003351!6.97e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.05e-12;2!UBERON:0005058;9.05e-12;2!UBERON:0009113;9.05e-12;2!UBERON:0000178;6.09e-09;15!UBERON:0000179;6.09e-09;15!UBERON:0000463;6.09e-09;15!UBERON:0002390;4.98e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.10e-09,15;UBERON:0000179,6.10e-09,15;UBERON:0000463,6.10e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.164201178899891,0.236132343941038,6.68719270643137,3.45446458287491,2.01260960310899,0,0,0,0.154934401160603,0,0,0.553995408531877,1.60435557976113,1.95309783644267,0,0,0,0,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0.344745680736619,1.29096936716765,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0.632924774881769,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,1.20118796110804,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,5.60508562981536,0.526768169550154,7.08155172409799,7.8602152549833,3.70082698199117,0.334372990781356,1.30368906653436,2.36723902867367,0,2.45103005147382,2.94605907474837,0.664601683750863,0.270803863765016,1.28091319725675,1.30059347559878,0.986627427622057,0,0.579606171470105,1.4828656316206,0.267540828089713,2.09071047609954,0.679856056185397,0.766440987203842,1.03088233644789,2.27717722817553,0,0.651083453856419,0,0.903450714466637,0.511946444617674,0,0.473554504088034,0.821127996921047,5.44338206706778,8.82552646085574,7.09639579025715,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.44024217006613,0.621984346622316,0.864719720501769,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,7.68419964787516,8.40947541952118,8.34229735818364,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,3.23571301227925,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0.213425530045242,0.159426272728822,0,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,1.29177819672012,1.48979314310059,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.164201178899891,0.236132343941038,6.68719270643137,3.45446458287491,2.01260960310899,0,0,0,0.154934401160603,0,0,0.553995408531877,1.60435557976113,1.95309783644267,0,0,0,0,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0.344745680736619,1.29096936716765,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0.632924774881769,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,1.20118796110804,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,5.60508562981536,0.526768169550154,7.08155172409799,7.8602152549833,3.70082698199117,0.334372990781356,1.30368906653436,2.36723902867367,0,2.45103005147382,2.94605907474837,0.664601683750863,0.270803863765016,1.28091319725675,1.30059347559878,0.986627427622057,0,0.579606171470105,1.4828656316206,0.267540828089713,2.09071047609954,0.679856056185397,0.766440987203842,1.03088233644789,2.27717722817553,0,0.651083453856419,0,0.903450714466637,0.511946444617674,0,0.473554504088034,0.821127996921047,5.44338206706778,8.82552646085574,7.09639579025715,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.44024217006613,0.621984346622316,0.864719720501769,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,7.68419964787516,8.40947541952118,8.34229735818364,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,3.23571301227925,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0.213425530045242,0.159426272728822,0,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,1.29177819672012,1.48979314310059,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p8@ARHGAP9 | |||
}} | }} |
Latest revision as of 14:34, 19 September 2015
Short description: | p8@ARHGAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGAP9_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 0bp_to_ENST00000548148_5end |
EntrezGene: | ARHGAP9 |
HGNC: | 14130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 7.02e-24 | 6 |
mature alpha-beta T cell | 1.67e-19 | 18 |
alpha-beta T cell | 1.67e-19 | 18 |
immature T cell | 1.67e-19 | 18 |
mature T cell | 1.67e-19 | 18 |
immature alpha-beta T cell | 1.67e-19 | 18 |
natural killer cell | 1.22e-18 | 3 |
pro-NK cell | 1.22e-18 | 3 |
basophil | 6.88e-18 | 3 |
single nucleate cell | 3.34e-17 | 3 |
mononuclear cell | 3.34e-17 | 3 |
T cell | 4.14e-17 | 25 |
pro-T cell | 4.14e-17 | 25 |
leukocyte | 5.58e-17 | 136 |
lymphoid lineage restricted progenitor cell | 5.18e-16 | 52 |
lymphocyte | 1.17e-15 | 53 |
common lymphoid progenitor | 1.17e-15 | 53 |
nongranular leukocyte | 1.73e-13 | 115 |
hematopoietic stem cell | 7.85e-13 | 168 |
regulatory T cell | 3.92e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.92e-12 | 2 |
naive regulatory T cell | 3.92e-12 | 2 |
hematopoietic cell | 6.19e-12 | 177 |
granulocyte | 1.07e-11 | 8 |
hematopoietic oligopotent progenitor cell | 9.84e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.84e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 1.25e-08 | 120 |
blood cell | 1.57e-08 | 11 |
naive T cell | 2.24e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.10e-09 | 15 |
haemolymphatic fluid | 6.10e-09 | 15 |
organism substance | 6.10e-09 | 15 |