FFCP PHASE1:Hg19::chr1:87170577..87170582,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51100 | |EntrezGene=51100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10833 | |HGNC=10833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482504_5end | |association_with_transcript=0bp_to_ENST00000482504_5end | ||
|cluster_id=chr1:87170577..87170582,+ | |||
|description=CAGE_peak_9_at_SH3GLB1_5end | |description=CAGE_peak_9_at_SH3GLB1_5end | ||
|id=chr1:87170577..87170582,+ | |id=chr1:87170577..87170582,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.78e-25!76;CL:0000738!2.09e-23!140;CL:0000557!7.48e-22!71;CL:0000839!1.56e-21!70;CL:0002057!7.58e-21!42;CL:0002009!8.67e-21!65;CL:0002194!6.00e-20!63;CL:0000576!6.00e-20!63;CL:0000040!6.00e-20!63;CL:0000559!6.00e-20!63;CL:0000860!1.38e-19!45;CL:0002031!8.84e-18!124;CL:0000037!1.02e-16!172;CL:0000566!1.02e-16!172;CL:0002087!3.48e-16!119;CL:0000763!4.65e-16!112;CL:0000049!4.65e-16!112;CL:0000134!5.48e-16!358;CL:0002320!9.15e-16!365;CL:0002032!8.44e-15!165;CL:0000837!8.44e-15!165;CL:0000988!1.05e-13!182;CL:0000219!4.86e-12!390;CL:0000048!3.95e-11!430;CL:0000723!1.07e-10!436;CL:0000034!7.54e-10!444 | |ontology_enrichment_celltype=CL:0000766!4.78e-25!76;CL:0000738!2.09e-23!140;CL:0000557!7.48e-22!71;CL:0000839!1.56e-21!70;CL:0002057!7.58e-21!42;CL:0002009!8.67e-21!65;CL:0002194!6.00e-20!63;CL:0000576!6.00e-20!63;CL:0000040!6.00e-20!63;CL:0000559!6.00e-20!63;CL:0000860!1.38e-19!45;CL:0002031!8.84e-18!124;CL:0000037!1.02e-16!172;CL:0000566!1.02e-16!172;CL:0002087!3.48e-16!119;CL:0000763!4.65e-16!112;CL:0000049!4.65e-16!112;CL:0000134!5.48e-16!358;CL:0002320!9.15e-16!365;CL:0002032!8.44e-15!165;CL:0000837!8.44e-15!165;CL:0000988!1.05e-13!182;CL:0000219!4.86e-12!390;CL:0000048!3.95e-11!430;CL:0000723!1.07e-10!436;CL:0000034!7.54e-10!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-35;33!CL:0002057;1.45e-35;33!CL:0000473;1.84e-30;39!CL:0000234;1.84e-30;39!CL:0000576;2.15e-19;48!CL:0000766;1.65e-18;69!CL:0000094;1.59e-09;8!CL:0000763;2.51e-09;100!CL:0000738;2.51e-07;136!CL:0002087;2.70e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.66e-42,72;CL:0000473,1.15e-36,48;CL:0000234,1.15e-36,48;CL:0000860,5.60e-36,42;CL:0002057,5.60e-36,42;CL:0000557,2.20e-33,67;CL:0000839,4.57e-32,66;CL:0000738,7.40e-31,136;CL:0002009,1.56e-30,61;CL:0002194,6.30e-30,59;CL:0000576,6.30e-30,59;CL:0000040,6.30e-30,59;CL:0000559,6.30e-30,59;CL:0000763,4.88e-24,108;CL:0000049,4.88e-24,108;CL:0002031,7.81e-24,120;CL:0000037,2.34e-21,168;CL:0002087,8.57e-21,115;CL:0002032,2.48e-20,161;CL:0000837,2.48e-20,161;CL:0000988,2.46e-19,177;CL:0000134,4.60e-13,354;CL:0002320,6.07e-13,361;CL:0000094,4.81e-10,8;CL:0000219,6.05e-10,386;CL:0000048,1.06e-09,427;CL:0000723,3.03e-09,433;CL:0000034,3.36e-09,441;CL:0000081,6.51e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-26;42!CL:0000049;3.22e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.80e-20!80;UBERON:0002390!4.26e-20!102;UBERON:0003061!4.26e-20!102;UBERON:0001474!1.19e-18!86;UBERON:0004765!1.63e-16!101;UBERON:0001434!1.63e-16!101;UBERON:0002193!7.75e-16!112;UBERON:0002384!1.55e-14!375;UBERON:0002405!1.35e-11!115;UBERON:0002204!3.05e-10!167;UBERON:0003081!7.36e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.61e-29,76;UBERON:0001474,2.40e-26,82;UBERON:0002390,3.15e-26,98;UBERON:0003061,3.15e-26,98;UBERON:0004765,2.11e-25,90;UBERON:0002405,8.72e-23,93;UBERON:0002193,2.08e-22,108;UBERON:0001434,1.89e-21,100;UBERON:0003081,6.76e-14,203;UBERON:0002204,7.76e-13,167;UBERON:0002384,1.39e-12,371;UBERON:0000926,1.24e-08,315;UBERON:0004120,1.24e-08,315;UBERON:0006603,1.24e-08,315 | |||
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|phase1_expression=0.54503513781167,0.642301571672949,1.12763523276777,1.0007329835313,1.34088328328186,0,0,0,0.522371256399677,0.245733936501509,0,0.655324116390517,0.791300934685361,0.247532705920093,0,0,1.20538905604795,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.305653622991805,0.246301768349837,0.0787107813136792,1.96682138424452,2.30297638858328,1.70297735647684,0,0,0,0.697204805222715,0.142169232487422,0.880801318004542,0.553995408531877,0.200544447470142,0.434021741431704,0.447830948479849,0.32389366601898,0.515151135268373,1.89017710413434,2.64513160582167,2.91100873425379,1.85943229524548,0.411167888021826,3.71647645074124,2.01384674625505,2.0492856522328,3.07426898855161,2.06847408441971,1.93645405075148,2.70852973188684,2.44715041405386,0.818718450173537,3.59557575112135,1.83650335422542,2.88836124368484,3.83602275479425,1.64925650093358,2.59302754908121,2.98357325372886,2.90209238628584,1.13477044938228,1.24564449799115,2.26123798731069,1.0429658368404,4.56096573880745,1.81619850790011,4.05105399586321,4.43047342417238,1.90129757680748,0.850417199860174,1.04829322754188,1.57260083605093,0.901061357049038,2.57160938715328,2.85012743741249,0.99458338599545,0.730656615058536,3.51992488922645,1.09227722252426,0,0,0.400395987036012,0.574752439954483,0,1.90810750907073,0,1.17447437874188,0.764546456250458,0,3.92355994087075,0.526768169550154,0.393419540227666,0.393010762749165,0.616804496998528,0.334372990781356,0.651844533267181,0,1.94826728407911,0.557052284425868,0.294605907474837,0.443067789167242,0.270803863765016,0.512365278902701,0,0.493313713811028,0.552700035571697,0.289803085735052,0.14828656316206,0.267540828089713,0,0.566546713487831,1.14966148080576,0.34362744548263,0.506039384039006,0,0,0,0.602300476311091,0.895906278080929,1.24930726552346,1.18388626022008,0,2.62088766192152,1.06976078313403,0.434473211648397,4.87613732627923,0,1.02290049474824,0,0,0.869079113764942,0.795285947051099,0,0.378139268656271,0.221729397462564,0.351339142772504,0.196468613246569,0,0,0.649094787309367,1.0447784237956,0.797747763113191,0.953962497221368,1.14398982156026,1.11437250398869,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.714397826272638,0.22452937262617,0,0,0,0.366403487860815,7.9068250461638,0,0,0,1.01304409331664,1.45650098894541,0.860509862246441,0.354668382198357,0,0,0,0.933633106199299,0.269421344139376,0.326923806226917,0,0,0,0.624320153660641,0.570471821544449,0.597794722207204,0.117434498643765,0.323745888736263,0.280901613404497,0.408308342509787,0.245668634623536,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.877955241761676,0.612975591598039,0.300476117813194,1.47461838108027,0.89694817844431,0.85422955527427,0.635795703478686,0,0.824420233907511,1.03056216018252,0.930584281657949,0.843881661206331,0.487185025805993,0.252433774244115,0.644349290496095,0.323292113637624,0.710019185033229,1.30977727695932,0.339121184620975,1.73934767846967,0.272746120590835,1.14721838155602,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0.882926198829301,0.491953754172454,0.343135620597051,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,1.05667824812239,0.144366447761074,0.462985512576611,0,0,0,0.984868024349589,2.57404691653161,0.445893486866185,0,0.503946384596579,1.27597587518148,0.985143749731331,0.290633938513962,0,3.4486426652716,0.528290604079356,1.24396869324463,1.29707958075265,1.00993946741104,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0.224262168690721,0.43596006883328,0.4400297149257,0.904902010304444,0,0.845302752556,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0.428933980974443,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.799783929456456,1.2162378064119,0,2.10833939483032,0,0,0,1.30303176000821,0.205476322550383,0.716243852959582,0.560425719967636,1.37921532141349,1.72502059887614,0.77005821767849,1.01637849688985,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,2.07207756718018,0.49076596687656,1.50051156317903,0.271265023699736,0.415941723061614,0.713715955188647,0.157702415033935,0.117141414992713,0.601892199455438,0,0,1.32845119707087,0.368738337083406,0.695068915744663,0,0.343143423810856,0.82707210449155,1.2942852049117,0.533637789017222,0.303127571446259,0,0.30239029332968,1.73675465473144,1.07423381301644,0,1.66580894032411,0.511707249066704,0.482561763430822,0,0.154209693802656,0.355123450626254,0.821271560138091,0,0.464841513839837,0.362578348774867,1.00253235151642,0.368323955743585,0.68888668898764,0.182091168006717,0.655622074797121,0,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0,0,1.13345112812495,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| ||
|short_description=p9@SH3GLB1 | |short_description=p9@SH3GLB1 | ||
}} | }} |
Latest revision as of 14:45, 19 September 2015
Short description: | p9@SH3GLB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SH3GLB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000482504_5end |
EntrezGene: | SH3GLB1 |
HGNC: | 10833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.66e-42 | 72 |
defensive cell | 1.15e-36 | 48 |
phagocyte | 1.15e-36 | 48 |
classical monocyte | 5.60e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.60e-36 | 42 |
granulocyte monocyte progenitor cell | 2.20e-33 | 67 |
myeloid lineage restricted progenitor cell | 4.57e-32 | 66 |
leukocyte | 7.40e-31 | 136 |
macrophage dendritic cell progenitor | 1.56e-30 | 61 |
monopoietic cell | 6.30e-30 | 59 |
monocyte | 6.30e-30 | 59 |
monoblast | 6.30e-30 | 59 |
promonocyte | 6.30e-30 | 59 |
myeloid cell | 4.88e-24 | 108 |
common myeloid progenitor | 4.88e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 7.81e-24 | 120 |
hematopoietic stem cell | 2.34e-21 | 168 |
nongranular leukocyte | 8.57e-21 | 115 |
hematopoietic oligopotent progenitor cell | 2.48e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-20 | 161 |
hematopoietic cell | 2.46e-19 | 177 |
mesenchymal cell | 4.60e-13 | 354 |
connective tissue cell | 6.07e-13 | 361 |
granulocyte | 4.81e-10 | 8 |
motile cell | 6.05e-10 | 386 |
multi fate stem cell | 1.06e-09 | 427 |
somatic stem cell | 3.03e-09 | 433 |
stem cell | 3.36e-09 | 441 |
blood cell | 6.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.61e-29 | 76 |
bone element | 2.40e-26 | 82 |
hematopoietic system | 3.15e-26 | 98 |
blood island | 3.15e-26 | 98 |
skeletal element | 2.11e-25 | 90 |
immune system | 8.72e-23 | 93 |
hemolymphoid system | 2.08e-22 | 108 |
skeletal system | 1.89e-21 | 100 |
lateral plate mesoderm | 6.76e-14 | 203 |
musculoskeletal system | 7.76e-13 | 167 |
connective tissue | 1.39e-12 | 371 |
mesoderm | 1.24e-08 | 315 |
mesoderm-derived structure | 1.24e-08 | 315 |
presumptive mesoderm | 1.24e-08 | 315 |