FFCP PHASE1:Hg19::chr14:24911941..24911952,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:24911941..24911952,-
|short_description=p5@SDR39U1
|description=CAGE_peak_5_at_SDR39U1_5end
|association_with_transcript=-6bp_to_uc001wpl.2_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56948 | |EntrezGene=56948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20275 | |HGNC=20275 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_uc001wpl.2_5end | |||
|cluster_id=chr14:24911941..24911952,- | |||
|description=CAGE_peak_5_at_SDR39U1_5end | |||
|id=chr14:24911941..24911952,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.01e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.03e-08,14;CL:0000767,5.42e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!9.59e-10!69;UBERON:0006238!9.59e-10!69;UBERON:0002616!1.79e-09!59;UBERON:0000073!2.07e-09!94;UBERON:0001016!2.07e-09!94;UBERON:0001049!3.13e-09!57;UBERON:0005068!3.13e-09!57;UBERON:0006241!3.13e-09!57;UBERON:0007135!3.13e-09!57;UBERON:0005743!1.40e-08!86;UBERON:0001017!1.54e-08!82;UBERON:0003080!1.45e-07!42;UBERON:0002780!2.51e-07!41;UBERON:0001890!2.51e-07!41;UBERON:0006240!2.51e-07!41;UBERON:0007023!7.78e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0000955,3.33e-08,68;UBERON:0006238,3.33e-08,68;UBERON:0001016,4.89e-08,89;UBERON:0001049,6.58e-08,56;UBERON:0005068,6.58e-08,56;UBERON:0006241,6.58e-08,56;UBERON:0007135,6.58e-08,56;UBERON:0001017,7.06e-07,81;UBERON:0002780,8.18e-07,41;UBERON:0001890,8.18e-07,41;UBERON:0003080,8.18e-07,41;UBERON:0006240,8.18e-07,41 | |||
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| ||
|short_description=p5@SDR39U1 | |||
}} | }} |
Latest revision as of 14:53, 19 September 2015
Short description: | p5@SDR39U1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SDR39U1_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_uc001wpl.2_5end |
EntrezGene: | SDR39U1 |
HGNC: | 20275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
brain | 3.33e-08 | 68 |
future brain | 3.33e-08 | 68 |
nervous system | 4.89e-08 | 89 |
neural tube | 6.58e-08 | 56 |
neural rod | 6.58e-08 | 56 |
future spinal cord | 6.58e-08 | 56 |
neural keel | 6.58e-08 | 56 |
central nervous system | 7.06e-07 | 81 |
regional part of forebrain | 8.18e-07 | 41 |
forebrain | 8.18e-07 | 41 |
anterior neural tube | 8.18e-07 | 41 |
future forebrain | 8.18e-07 | 41 |