FFCP PHASE1:Hg19::chr6:7108179..7108199,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6239 | |EntrezGene=6239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10449 | |HGNC=10449 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003mxb.2,uc003mxc.2,uc010jnw.2,uc010jnx.2_5end | |association_with_transcript=0bp_to_uc003mxb.2,uc003mxc.2,uc010jnw.2,uc010jnx.2_5end | ||
|cluster_id=chr6:7108179..7108199,+ | |||
|description=CAGE_peak_4_at_RREB1_5end | |description=CAGE_peak_4_at_RREB1_5end | ||
|id=chr6:7108179..7108199,+ | |id=chr6:7108179..7108199,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.49e-33!112;CL:0000049!3.49e-33!112;CL:0000557!9.27e-23!71;CL:0000766!2.94e-22!76;CL:0002009!8.61e-21!65;CL:0000839!8.19e-20!70;CL:0002194!1.35e-19!63;CL:0000576!1.35e-19!63;CL:0000040!1.35e-19!63;CL:0000559!1.35e-19!63;CL:0000037!3.61e-19!172;CL:0000566!3.61e-19!172;CL:0000988!1.08e-18!182;CL:0002057!2.03e-17!42;CL:0002032!4.61e-17!165;CL:0000837!4.61e-17!165;CL:0000860!1.21e-15!45;CL:0000738!8.86e-12!140;CL:0002031!4.62e-08!124;CL:0000451!1.82e-07!10;CL:0002087!4.18e-07!119;CL:0002320!8.79e-07!365 | |ontology_enrichment_celltype=CL:0000763!3.49e-33!112;CL:0000049!3.49e-33!112;CL:0000557!9.27e-23!71;CL:0000766!2.94e-22!76;CL:0002009!8.61e-21!65;CL:0000839!8.19e-20!70;CL:0002194!1.35e-19!63;CL:0000576!1.35e-19!63;CL:0000040!1.35e-19!63;CL:0000559!1.35e-19!63;CL:0000037!3.61e-19!172;CL:0000566!3.61e-19!172;CL:0000988!1.08e-18!182;CL:0002057!2.03e-17!42;CL:0002032!4.61e-17!165;CL:0000837!4.61e-17!165;CL:0000860!1.21e-15!45;CL:0000738!8.86e-12!140;CL:0002031!4.62e-08!124;CL:0000451!1.82e-07!10;CL:0002087!4.18e-07!119;CL:0002320!8.79e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.90e-16;33!CL:0002057;4.90e-16;33!CL:0000473;7.82e-16;39!CL:0000234;7.82e-16;39!CL:0000576;4.81e-14;48!CL:0000766;6.86e-13;69!CL:0000763;1.60e-11;100!CL:0000451;2.48e-08;10!CL:0000990;5.19e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;4.90e-16;33!CL:0002057;4.90e-16;33!CL:0000473;7.82e-16;39!CL:0000234;7.82e-16;39!CL:0000576;4.81e-14;48!CL:0000766;6.86e-13;69!CL:0000763;1.60e-11;100!CL:0000451;2.48e-08;10!CL:0000990;5.19e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.58e-40,108;CL:0000049,8.58e-40,108;CL:0000557,8.43e-29,67;CL:0000766,1.80e-28,72;CL:0002009,6.05e-27,61;CL:0002194,1.70e-25,59;CL:0000576,1.70e-25,59;CL:0000040,1.70e-25,59;CL:0000559,1.70e-25,59;CL:0000839,6.66e-25,66;CL:0000037,6.83e-23,168;CL:0000473,1.13e-22,48;CL:0000234,1.13e-22,48;CL:0000988,6.88e-22,177;CL:0002032,2.11e-20,161;CL:0000837,2.11e-20,161;CL:0000860,6.78e-20,42;CL:0002057,6.78e-20,42;CL:0000738,7.42e-15,136;CL:0002031,6.04e-10,120;CL:0002087,4.08e-09,115;CL:0000451,2.16e-08,10;CL:0002320,2.27e-07,361;CL:0000134,3.05e-07,354;CL:0000990,4.37e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-14;42!CL:0000049;4.08e-11;108 | |ontology_enrichment_development_v019=CL:0002057;1.03e-14;42!CL:0000049;4.08e-11;108 | ||
|ontology_enrichment_disease=DOID:8692!1.84e-10!31;DOID:1240!1.27e-07!39 | |ontology_enrichment_disease=DOID:8692!1.84e-10!31;DOID:1240!1.27e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.43e-10;31 | |ontology_enrichment_disease_v019=DOID:8692;4.43e-10;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,7.24e-11,31;DOID:1240,2.20e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.05e-20!115;UBERON:0002371!1.32e-19!80;UBERON:0001474!1.35e-17!86;UBERON:0002390!5.22e-15!102;UBERON:0003061!5.22e-15!102;UBERON:0004765!2.79e-13!101;UBERON:0001434!2.79e-13!101;UBERON:0002193!3.49e-13!112;UBERON:0002384!3.08e-07!375 | |ontology_enrichment_uberon=UBERON:0002405!1.05e-20!115;UBERON:0002371!1.32e-19!80;UBERON:0001474!1.35e-17!86;UBERON:0002390!5.22e-15!102;UBERON:0003061!5.22e-15!102;UBERON:0004765!2.79e-13!101;UBERON:0001434!2.79e-13!101;UBERON:0002193!3.49e-13!112;UBERON:0002384!3.08e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.23e-25,76;UBERON:0001474,3.19e-21,82;UBERON:0002405,3.23e-20,93;UBERON:0002390,3.38e-19,98;UBERON:0003061,3.38e-19,98;UBERON:0004765,9.39e-19,90;UBERON:0002193,7.26e-17,108;UBERON:0001434,1.05e-14,100;UBERON:0002384,6.62e-08,371 | |||
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| ||
|short_description=p4@RREB1 | |short_description=p4@RREB1 | ||
}} | }} |
Latest revision as of 15:27, 19 September 2015
Short description: | p4@RREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RREB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003mxb.2, uc003mxc.2, uc010jnw.2, uc010jnx.2_5end |
EntrezGene: | RREB1 |
HGNC: | 10449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.58e-40 | 108 |
common myeloid progenitor | 8.58e-40 | 108 |
granulocyte monocyte progenitor cell | 8.43e-29 | 67 |
myeloid leukocyte | 1.80e-28 | 72 |
macrophage dendritic cell progenitor | 6.05e-27 | 61 |
monopoietic cell | 1.70e-25 | 59 |
monocyte | 1.70e-25 | 59 |
monoblast | 1.70e-25 | 59 |
promonocyte | 1.70e-25 | 59 |
myeloid lineage restricted progenitor cell | 6.66e-25 | 66 |
hematopoietic stem cell | 6.83e-23 | 168 |
defensive cell | 1.13e-22 | 48 |
phagocyte | 1.13e-22 | 48 |
hematopoietic cell | 6.88e-22 | 177 |
hematopoietic oligopotent progenitor cell | 2.11e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-20 | 161 |
classical monocyte | 6.78e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.78e-20 | 42 |
leukocyte | 7.42e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 6.04e-10 | 120 |
nongranular leukocyte | 4.08e-09 | 115 |
dendritic cell | 2.16e-08 | 10 |
connective tissue cell | 2.27e-07 | 361 |
mesenchymal cell | 3.05e-07 | 354 |
conventional dendritic cell | 4.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.23e-25 | 76 |
bone element | 3.19e-21 | 82 |
immune system | 3.23e-20 | 93 |
hematopoietic system | 3.38e-19 | 98 |
blood island | 3.38e-19 | 98 |
skeletal element | 9.39e-19 | 90 |
hemolymphoid system | 7.26e-17 | 108 |
skeletal system | 1.05e-14 | 100 |
connective tissue | 6.62e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.24e-11 | 31 |
leukemia | 2.20e-08 | 39 |