FFCP PHASE1:Hg19::chr3:77088920..77088929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCK4 | |UniProt=Q9HCK4 | ||
|association_with_transcript=-107bp_to_ENST00000461745_5end | |association_with_transcript=-107bp_to_ENST00000461745_5end | ||
|cluster_id=chr3:77088920..77088929,+ | |||
|coexpression_cluster_id=C2753 | |||
|description=CAGE_peak_19_at_ROBO2_5end | |description=CAGE_peak_19_at_ROBO2_5end | ||
|id=chr3:77088920..77088929,+ | |id=chr3:77088920..77088929,+ | ||
|ontology_enrichment_celltype=CL:0000047!4.65e-13!8;CL:0002322!1.45e-08!5;CL:0000540!5.09e-08!6;CL:0000031!5.09e-08!6;CL:0000404!5.09e-08!6 | |ontology_enrichment_celltype=CL:0000047!4.65e-13!8;CL:0002322!1.45e-08!5;CL:0000540!5.09e-08!6;CL:0000031!5.09e-08!6;CL:0000404!5.09e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.78e-29;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.08e-16,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!7.95e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:5409;3.29e-15;4!DOID:1325;4.30e-09;7!DOID:3904;4.30e-09;7!DOID:3905;2.90e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.76e-15,4;DOID:1325,3.88e-09,7;DOID:3904,3.88e-09,7;DOID:3905,2.68e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.21e-22!94;UBERON:0001016!2.21e-22!94;UBERON:0005743!3.64e-22!86;UBERON:0001017!5.59e-22!82;UBERON:0000924!5.90e-17!173;UBERON:0006601!5.90e-17!173;UBERON:0002346!4.62e-16!90;UBERON:0004121!2.89e-14!169;UBERON:0001049!1.04e-13!57;UBERON:0005068!1.04e-13!57;UBERON:0006241!1.04e-13!57;UBERON:0007135!1.04e-13!57;UBERON:0003075!7.44e-13!86;UBERON:0007284!7.44e-13!86;UBERON:0000955!1.20e-11!69;UBERON:0006238!1.20e-11!69;UBERON:0002616!1.21e-11!59;UBERON:0003056!1.13e-09!61;UBERON:0002780!1.33e-09!41;UBERON:0001890!1.33e-09!41;UBERON:0006240!1.33e-09!41;UBERON:0003080!2.65e-09!42;UBERON:0000153!4.43e-08!129;UBERON:0007811!4.43e-08!129;UBERON:0000033!5.50e-08!123;UBERON:0001869!1.12e-07!32;UBERON:0002020!3.68e-07!34;UBERON:0003528!3.68e-07!34;UBERON:0001905!4.05e-07!2;UBERON:0002757!4.05e-07!2;UBERON:0010134!4.05e-07!2;UBERON:0002784!4.05e-07!2;UBERON:0005408!4.05e-07!2;UBERON:0001899!4.05e-07!2;UBERON:0001893!4.13e-07!34;UBERON:0001950!4.59e-07!20;UBERON:0000200!7.65e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.24e-29;2!UBERON:0002757;5.24e-29;2!UBERON:0010134;5.24e-29;2!UBERON:0005408;5.24e-29;2!UBERON:0001899;5.24e-29;2!UBERON:0003296;4.88e-15;4!UBERON:0010133;4.88e-15;4!UBERON:0002784;4.88e-15;4!UBERON:0001894;5.37e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.43e-28,2;UBERON:0002757,1.43e-28,2;UBERON:0010134,1.43e-28,2;UBERON:0005408,1.43e-28,2;UBERON:0001899,1.43e-28,2;UBERON:0003296,8.02e-15,4;UBERON:0010133,8.02e-15,4;UBERON:0002784,8.02e-15,4;UBERON:0001017,2.81e-10,81;UBERON:0001016,3.37e-09,89;UBERON:0001894,7.11e-09,7;UBERON:0006222,7.11e-09,7 | |||
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| ||
|short_description=p19@ROBO2 | |short_description=p19@ROBO2 | ||
}} | }} |
Latest revision as of 16:07, 19 September 2015
Short description: | p19@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ROBO2_5end |
Coexpression cluster: | C2753_parietal_acute_occipital_temporal_small_duodenum_gastric |
Association with transcript: | -107bp_to_ENST00000461745_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | Q9HCK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.08e-16 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.43e-28 | 2 |
regional part of epithalamus | 1.43e-28 | 2 |
secretory circumventricular organ | 1.43e-28 | 2 |
circumventricular organ | 1.43e-28 | 2 |
epithalamus | 1.43e-28 | 2 |
gland of diencephalon | 8.02e-15 | 4 |
neuroendocrine gland | 8.02e-15 | 4 |
regional part of diencephalon | 8.02e-15 | 4 |
central nervous system | 2.81e-10 | 81 |
nervous system | 3.37e-09 | 89 |
diencephalon | 7.11e-09 | 7 |
future diencephalon | 7.11e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.76e-15 | 4 |
bronchus cancer | 3.88e-09 | 7 |
bronchogenic carcinoma | 3.88e-09 | 7 |
lung carcinoma | 2.68e-07 | 9 |