FFCP PHASE1:Hg19::chr22:29977073..29977108,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8508 | |EntrezGene=8508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7827 | |HGNC=7827 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCR5,B4DQI7,Q9BPW8 | |UniProt=F8WCR5,B4DQI7,Q9BPW8 | ||
|association_with_transcript=0bp_to_ENST00000455496,ENST00000496944,NM_001202502,uc011akp.1_5end | |association_with_transcript=0bp_to_ENST00000455496,ENST00000496944,NM_001202502,uc011akp.1_5end | ||
|cluster_id=chr22:29977073..29977108,- | |||
|description=CAGE_peak_1_at_NIPSNAP1_5end | |description=CAGE_peak_1_at_NIPSNAP1_5end | ||
|id=chr22:29977073..29977108,- | |id=chr22:29977073..29977108,- | ||
|ontology_enrichment_celltype=CL:0000066!6.33e-17!254;CL:0002321!2.36e-14!248;CL:0000220!1.19e-13!246;CL:0000183!6.66e-08!59;CL:0000393!1.16e-07!60;CL:0000211!1.16e-07!60;CL:1000449!1.67e-07!16;CL:0000221!3.67e-07!71;CL:1000497!4.12e-07!18;CL:0002518!4.12e-07!18;CL:0000055!8.86e-07!180;CL:0000133!9.56e-07!59 | |ontology_enrichment_celltype=CL:0000066!6.33e-17!254;CL:0002321!2.36e-14!248;CL:0000220!1.19e-13!246;CL:0000183!6.66e-08!59;CL:0000393!1.16e-07!60;CL:0000211!1.16e-07!60;CL:1000449!1.67e-07!16;CL:0000221!3.67e-07!71;CL:1000497!4.12e-07!18;CL:0002518!4.12e-07!18;CL:0000055!8.86e-07!180;CL:0000133!9.56e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000449;5.78e-08;15!CL:1000497;1.71e-07;17!CL:0002518;1.71e-07;17!CL:1000507;6.95e-07;10!CL:1000494;6.95e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.42e-17,253;CL:0002321,1.63e-14,250;CL:1000449,6.38e-08,15;CL:0000393,1.49e-07,61;CL:0000211,1.49e-07,61;CL:1000497,1.86e-07,17;CL:0002518,1.86e-07,17;CL:0000221,4.17e-07,72;CL:1000507,7.23e-07,10;CL:1000494,7.23e-07,10;CL:0000133,9.56e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.54e-10!143;DOID:305!2.11e-08!106;DOID:162!1.26e-07!235;DOID:14566!2.20e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.52e-10,143;DOID:305,2.08e-08,106;DOID:162,1.23e-07,235;DOID:14566,2.15e-07,239 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000970;2.34e-08;20!UBERON:0000019;2.72e-08;19!UBERON:0000047;2.72e-08;19!UBERON:0004088;2.72e-08;19!UBERON:0010230;2.72e-08;19!UBERON:0001456;3.86e-08;21!UBERON:0006555;5.78e-08;15!UBERON:0004819;5.78e-08;15!UBERON:0001285;5.78e-08;15!UBERON:0007684;5.78e-08;15!UBERON:0006554;1.07e-07;30!UBERON:0001008;1.07e-07;30!UBERON:0002104;2.01e-07;21!UBERON:0002113;5.56e-07;24!UBERON:0011143;5.56e-07;24!UBERON:0001851;6.49e-07;15!UBERON:0004211;6.95e-07;10!UBERON:0009773;6.95e-07;10!UBERON:0001231;6.95e-07;10!UBERON:0004810;6.95e-07;10 | |||
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| ||
|short_description=p1@NIPSNAP1 | |short_description=p1@NIPSNAP1 | ||
}} | }} |
Latest revision as of 16:09, 19 September 2015
Short description: | p1@NIPSNAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NIPSNAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000455496, ENST00000496944, NM_001202502, uc011akp.1_5end |
EntrezGene: | NIPSNAP1 |
HGNC: | 7827 |
UniProt: | F8WCR5B4DQI7Q9BPW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.42e-17 | 253 |
embryonic cell | 1.63e-14 | 250 |
epithelial cell of nephron | 6.38e-08 | 15 |
electrically responsive cell | 1.49e-07 | 61 |
electrically active cell | 1.49e-07 | 61 |
kidney cell | 1.86e-07 | 17 |
kidney epithelial cell | 1.86e-07 | 17 |
ectodermal cell | 4.17e-07 | 72 |
kidney tubule cell | 7.23e-07 | 10 |
nephron tubule epithelial cell | 7.23e-07 | 10 |
neurectodermal cell | 9.56e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.52e-10 | 143 |
carcinoma | 2.08e-08 | 106 |
cancer | 1.23e-07 | 235 |
disease of cellular proliferation | 2.15e-07 | 239 |