FFCP PHASE1:Hg19::chr17:34417002..34417045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6348 | |EntrezGene=6348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10627 | |HGNC=10627 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=469bp_to_ENST00000470334_5end | |association_with_transcript=469bp_to_ENST00000470334_5end | ||
|cluster_id=chr17:34417002..34417045,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_CCL3_5end | |description=CAGE_peak_2_at_CCL3_5end | ||
|id=chr17:34417002..34417045,- | |id=chr17:34417002..34417045,- | ||
|ontology_enrichment_celltype=CL:0002057!5.74e-69!42;CL:0000860!7.93e-64!45;CL:0002009!1.13e-53!65;CL:0002194!2.67e-52!63;CL:0000576!2.67e-52!63;CL:0000040!2.67e-52!63;CL:0000559!2.67e-52!63;CL:0000557!1.88e-48!71;CL:0000766!9.26e-48!76;CL:0000839!2.80e-46!70;CL:0000738!3.64e-46!140;CL:0002087!3.78e-46!119;CL:0002031!2.14e-41!124;CL:0000988!4.60e-40!182;CL:0000037!2.40e-37!172;CL:0000566!2.40e-37!172;CL:0002032!5.70e-32!165;CL:0000837!5.70e-32!165;CL:0000763!1.46e-31!112;CL:0000049!1.46e-31!112;CL:0000080!4.72e-14!6;CL:0000134!7.94e-14!358;CL:0002393!2.17e-13!9;CL:0002397!2.17e-13!9;CL:0002320!2.43e-13!365;CL:0000219!2.18e-12!390;CL:0000034!1.30e-09!444;CL:0000048!1.37e-09!430;CL:0000723!2.66e-09!436 | |ontology_enrichment_celltype=CL:0002057!5.74e-69!42;CL:0000860!7.93e-64!45;CL:0002009!1.13e-53!65;CL:0002194!2.67e-52!63;CL:0000576!2.67e-52!63;CL:0000040!2.67e-52!63;CL:0000559!2.67e-52!63;CL:0000557!1.88e-48!71;CL:0000766!9.26e-48!76;CL:0000839!2.80e-46!70;CL:0000738!3.64e-46!140;CL:0002087!3.78e-46!119;CL:0002031!2.14e-41!124;CL:0000988!4.60e-40!182;CL:0000037!2.40e-37!172;CL:0000566!2.40e-37!172;CL:0002032!5.70e-32!165;CL:0000837!5.70e-32!165;CL:0000763!1.46e-31!112;CL:0000049!1.46e-31!112;CL:0000080!4.72e-14!6;CL:0000134!7.94e-14!358;CL:0002393!2.17e-13!9;CL:0002397!2.17e-13!9;CL:0002320!2.43e-13!365;CL:0000219!2.18e-12!390;CL:0000034!1.30e-09!444;CL:0000048!1.37e-09!430;CL:0000723!2.66e-09!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.58e-56;33!CL:0002057;3.58e-56;33!CL:0000473;2.61e-47;39!CL:0000234;2.61e-47;39!CL:0000576;2.26e-34;48!CL:0000766;1.69e-26;69!CL:0002393;6.52e-19;6!CL:0002397;6.52e-19;6!CL:0002087;2.61e-15;104!CL:0000763;3.96e-15;100!CL:0000226;2.94e-10;3!CL:0000842;2.94e-10;3!CL:0000738;5.23e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.35e-75,48;CL:0000234,3.35e-75,48;CL:0000860,7.22e-72,42;CL:0002057,7.22e-72,42;CL:0002194,2.24e-59,59;CL:0000576,2.24e-59,59;CL:0000040,2.24e-59,59;CL:0000559,2.24e-59,59;CL:0002009,2.47e-57,61;CL:0000839,9.28e-53,66;CL:0000766,1.57e-52,72;CL:0000557,6.33e-52,67;CL:0002087,1.78e-34,115;CL:0000763,7.96e-34,108;CL:0000049,7.96e-34,108;CL:0000738,4.14e-31,136;CL:0002031,2.09e-27,120;CL:0000988,4.78e-25,177;CL:0000037,2.12e-24,168;CL:0002032,2.21e-21,161;CL:0000837,2.21e-21,161;CL:0002393,1.05e-12,9;CL:0002397,1.05e-12,9;CL:0000226,2.74e-10,3;CL:0000842,2.74e-10,3;CL:0000134,2.84e-10,354;CL:0002320,5.54e-10,361;CL:0000219,5.80e-09,386;CL:0000048,1.03e-07,427;CL:0000723,1.54e-07,433;CL:0000034,2.58e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-52;42!CL:0000049;6.97e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.28e-50!102;UBERON:0003061!5.28e-50!102;UBERON:0002371!8.91e-45!80;UBERON:0002193!1.17e-44!112;UBERON:0001474!4.66e-41!86;UBERON:0004765!7.98e-36!101;UBERON:0001434!7.98e-36!101;UBERON:0002405!2.39e-34!115;UBERON:0003081!1.82e-19!216;UBERON:0002204!3.73e-18!167;UBERON:0002384!1.12e-12!375 | |ontology_enrichment_uberon=UBERON:0002390!5.28e-50!102;UBERON:0003061!5.28e-50!102;UBERON:0002371!8.91e-45!80;UBERON:0002193!1.17e-44!112;UBERON:0001474!4.66e-41!86;UBERON:0004765!7.98e-36!101;UBERON:0001434!7.98e-36!101;UBERON:0002405!2.39e-34!115;UBERON:0003081!1.82e-19!216;UBERON:0002204!3.73e-18!167;UBERON:0002384!1.12e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.17e-45,76;UBERON:0002390,9.51e-45,98;UBERON:0003061,9.51e-45,98;UBERON:0001474,8.10e-42,82;UBERON:0002193,2.95e-40,108;UBERON:0004765,8.70e-38,90;UBERON:0002405,1.88e-36,93;UBERON:0001434,1.21e-33,100;UBERON:0003081,1.72e-19,203;UBERON:0002204,1.41e-18,167;UBERON:0000926,5.53e-11,315;UBERON:0004120,5.53e-11,315;UBERON:0006603,5.53e-11,315;UBERON:0002384,1.37e-09,371 | |||
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| ||
|short_description=p2@CCL3 | |short_description=p2@CCL3 | ||
}} | }} |
Latest revision as of 16:38, 19 September 2015
Short description: | p2@CCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCL3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 469bp_to_ENST00000470334_5end |
EntrezGene: | CCL3 |
HGNC: | 10627 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.17e-45 | 76 |
hematopoietic system | 9.51e-45 | 98 |
blood island | 9.51e-45 | 98 |
bone element | 8.10e-42 | 82 |
hemolymphoid system | 2.95e-40 | 108 |
skeletal element | 8.70e-38 | 90 |
immune system | 1.88e-36 | 93 |
skeletal system | 1.21e-33 | 100 |
lateral plate mesoderm | 1.72e-19 | 203 |
musculoskeletal system | 1.41e-18 | 167 |
mesoderm | 5.53e-11 | 315 |
mesoderm-derived structure | 5.53e-11 | 315 |
presumptive mesoderm | 5.53e-11 | 315 |
connective tissue | 1.37e-09 | 371 |