FFCP PHASE1:Hg19::chr11:67172369..67172408,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374403 | |EntrezGene=374403 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24702 | |HGNC=24702 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533745_5end | |association_with_transcript=0bp_to_ENST00000533745_5end | ||
|cluster_id=chr11:67172369..67172408,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_TBC1D10C_5end | |description=CAGE_peak_3_at_TBC1D10C_5end | ||
|id=chr11:67172369..67172408,+ | |id=chr11:67172369..67172408,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.78e-30!18;CL:0000789!1.78e-30!18;CL:0002420!1.78e-30!18;CL:0002419!1.78e-30!18;CL:0000790!1.78e-30!18;CL:0000084!2.67e-27!25;CL:0000827!2.67e-27!25;CL:0000838!2.33e-23!52;CL:0000542!9.96e-23!53;CL:0000051!9.96e-23!53;CL:0000625!5.78e-20!11;CL:0000738!1.11e-18!140;CL:0002087!3.02e-18!119;CL:0002031!1.20e-15!124;CL:0000037!6.83e-14!172;CL:0000566!6.83e-14!172;CL:0002032!1.13e-12!165;CL:0000837!1.13e-12!165;CL:0000988!2.56e-12!182;CL:0000624!7.13e-11!6 | |ontology_enrichment_celltype=CL:0000791!1.78e-30!18;CL:0000789!1.78e-30!18;CL:0002420!1.78e-30!18;CL:0002419!1.78e-30!18;CL:0000790!1.78e-30!18;CL:0000084!2.67e-27!25;CL:0000827!2.67e-27!25;CL:0000838!2.33e-23!52;CL:0000542!9.96e-23!53;CL:0000051!9.96e-23!53;CL:0000625!5.78e-20!11;CL:0000738!1.11e-18!140;CL:0002087!3.02e-18!119;CL:0002031!1.20e-15!124;CL:0000037!6.83e-14!172;CL:0000566!6.83e-14!172;CL:0002032!1.13e-12!165;CL:0000837!1.13e-12!165;CL:0000988!2.56e-12!182;CL:0000624!7.13e-11!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.96e-53;18!CL:0000789;2.96e-53;18!CL:0002419;2.96e-53;18!CL:0000084;1.58e-41;25!CL:0000625;3.86e-38;11!CL:0000624;4.69e-20;6!CL:0000542;7.45e-13;53!CL:0000898;6.49e-11;3!CL:0000623;2.07e-10;3!CL:0000815;8.62e-08;2!CL:0000792;8.62e-08;2!CL:0002677;8.62e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.87e-53,18;CL:0000789,2.87e-53,18;CL:0002420,2.87e-53,18;CL:0002419,2.87e-53,18;CL:0000790,2.87e-53,18;CL:0000084,1.64e-41,25;CL:0000827,1.64e-41,25;CL:0000625,3.61e-38,11;CL:0000838,2.69e-24,52;CL:0000542,9.82e-24,53;CL:0000051,9.82e-24,53;CL:0000624,4.86e-20,6;CL:0002087,2.63e-13,115;CL:0000738,2.15e-12,136;CL:0000898,6.39e-11,3;CL:0000623,1.70e-10,3;CL:0000825,1.70e-10,3;CL:0002031,2.74e-10,120;CL:0000037,8.56e-09,168;CL:0000988,5.01e-08,177;CL:0000815,8.33e-08,2;CL:0000792,8.33e-08,2;CL:0002677,8.33e-08,2;CL:0002032,8.75e-08,161;CL:0000837,8.75e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.96e-53;18!CL:0000051;7.45e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.15e-12!15;UBERON:0000179!5.15e-12!15;UBERON:0000463!5.15e-12!15;UBERON:0007023!1.68e-10!115;UBERON:0004177!4.64e-08!7;UBERON:0002390!9.16e-08!102;UBERON:0003061!9.16e-08!102;UBERON:0002193!1.25e-07!112;UBERON:0002370!4.60e-07!4;UBERON:0005058!4.60e-07!4;UBERON:0009113!4.60e-07!4;UBERON:0003295!4.60e-07!4;UBERON:0005562!4.60e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.11e-19;15!UBERON:0000179;1.11e-19;15!UBERON:0000463;1.11e-19;15!UBERON:0002390;5.12e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.49e-20,15;UBERON:0000179,9.49e-20,15;UBERON:0000463,9.49e-20,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.0787107813136792,0.393364276848904,1.53531759238885,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,0.601633342410425,1.08505435357926,0.223915474239924,0.647787332037959,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,2.360517241366,5.10913991573914,4.5232329779892,10.6999357050034,3.91106719960308,3.78758244587787,9.74133642039557,6.90744832688076,4.12448270464772,5.09527957542329,7.04090045789041,12.1686753739391,9.88451041455075,4.60426132890293,6.35605040907451,8.98389565778663,7.56261472126508,5.35081656179426,7.31748666634838,10.3111501854785,4.59864592322305,6.8725489096526,3.03623630423403,8.28270077242652,7.81300144627702,12.3558765778289,5.11955404864427,7.03926361349301,8.74515085866421,7.81364931745256,9.03240796613151,4.83856183739358,5.08136371988664,5.79297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,2.26368658489047,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.672510863961164,1.97030760201927,3.88129634747131,3.59360501583295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,0.862856803274467,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,3.41788312304498,1.90585420366231,4.93634727703433,3.24236655596359,1.62009431171434,3.96562588147135,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,2.48655523978033,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.773494655682926,0,0,0,0,0,1.37618785021362,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.710478008196067,0.993195428733726,0,0.0636471582781649,0.202117188958219,0,0,1.21233695426258,0,0,0,0,0,0,0,0,0,0,2.61655931668334,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.0787107813136792,0.393364276848904,1.53531759238885,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,0.601633342410425,1.08505435357926,0.223915474239924,0.647787332037959,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,2.360517241366,5.10913991573914,4.5232329779892,10.6999357050034,3.91106719960308,3.78758244587787,9.74133642039557,6.90744832688076,4.12448270464772,5.09527957542329,7.04090045789041,12.1686753739391,9.88451041455075,4.60426132890293,6.35605040907451,8.98389565778663,7.56261472126508,5.35081656179426,7.31748666634838,10.3111501854785,4.59864592322305,6.8725489096526,3.03623630423403,8.28270077242652,7.81300144627702,12.3558765778289,5.11955404864427,7.03926361349301,8.74515085866421,7.81364931745256,9.03240796613151,4.83856183739358,5.08136371988664,5.79297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,2.26368658489047,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.672510863961164,1.97030760201927,3.88129634747131,3.59360501583295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,0.862856803274467,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,3.41788312304498,1.90585420366231,4.93634727703433,3.24236655596359,1.62009431171434,3.96562588147135,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,2.48655523978033,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.773494655682926,0,0,0,0,0,1.37618785021362,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.710478008196067,0.993195428733726,0,0.0636471582781649,0.202117188958219,0,0,1.21233695426258,0,0,0,0,0,0,0,0,0,0,2.61655931668334,0 | ||
|short_description=p3@TBC1D10C | |short_description=p3@TBC1D10C | ||
}} | }} |
Latest revision as of 17:50, 19 September 2015
Short description: | p3@TBC1D10C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBC1D10C_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000533745_5end |
EntrezGene: | TBC1D10C |
HGNC: | 24702 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.87e-53 | 18 |
alpha-beta T cell | 2.87e-53 | 18 |
immature T cell | 2.87e-53 | 18 |
mature T cell | 2.87e-53 | 18 |
immature alpha-beta T cell | 2.87e-53 | 18 |
T cell | 1.64e-41 | 25 |
pro-T cell | 1.64e-41 | 25 |
CD8-positive, alpha-beta T cell | 3.61e-38 | 11 |
lymphoid lineage restricted progenitor cell | 2.69e-24 | 52 |
lymphocyte | 9.82e-24 | 53 |
common lymphoid progenitor | 9.82e-24 | 53 |
CD4-positive, alpha-beta T cell | 4.86e-20 | 6 |
nongranular leukocyte | 2.63e-13 | 115 |
leukocyte | 2.15e-12 | 136 |
naive T cell | 6.39e-11 | 3 |
natural killer cell | 1.70e-10 | 3 |
pro-NK cell | 1.70e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 2.74e-10 | 120 |
hematopoietic stem cell | 8.56e-09 | 168 |
hematopoietic cell | 5.01e-08 | 177 |
regulatory T cell | 8.33e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.33e-08 | 2 |
naive regulatory T cell | 8.33e-08 | 2 |
hematopoietic oligopotent progenitor cell | 8.75e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.75e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 9.49e-20 | 15 |
haemolymphatic fluid | 9.49e-20 | 15 |
organism substance | 9.49e-20 | 15 |