FFCP PHASE1:Hg19::chr18:47807845..47807918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4152 | |EntrezGene=4152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6916 | |HGNC=6916 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000353909,ENST00000398493_5end | |association_with_transcript=0bp_to_ENST00000353909,ENST00000398493_5end | ||
|cluster_id=chr18:47807845..47807918,- | |||
|description=CAGE_peak_1_at_MBD1_5end | |description=CAGE_peak_1_at_MBD1_5end | ||
|id=chr18:47807845..47807918,- | |id=chr18:47807845..47807918,- | ||
|ontology_enrichment_celltype=CL:0000738!6.45e-07!140 | |ontology_enrichment_celltype=CL:0000738!6.45e-07!140 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.48e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.31e-16!115;UBERON:0001049!2.77e-09!57;UBERON:0005068!2.77e-09!57;UBERON:0006241!2.77e-09!57;UBERON:0007135!2.77e-09!57;UBERON:0002616!3.69e-09!59;UBERON:0003075!4.88e-09!86;UBERON:0007284!4.88e-09!86;UBERON:0002346!4.16e-08!90;UBERON:0002780!4.30e-08!41;UBERON:0001890!4.30e-08!41;UBERON:0006240!4.30e-08!41;UBERON:0003080!1.66e-07!42;UBERON:0000479!1.75e-07!787;UBERON:0003056!2.33e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!6.31e-16!115;UBERON:0001049!2.77e-09!57;UBERON:0005068!2.77e-09!57;UBERON:0006241!2.77e-09!57;UBERON:0007135!2.77e-09!57;UBERON:0002616!3.69e-09!59;UBERON:0003075!4.88e-09!86;UBERON:0007284!4.88e-09!86;UBERON:0002346!4.16e-08!90;UBERON:0002780!4.30e-08!41;UBERON:0001890!4.30e-08!41;UBERON:0006240!4.30e-08!41;UBERON:0003080!1.66e-07!42;UBERON:0000479!1.75e-07!787;UBERON:0003056!2.33e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.21e-07;53!UBERON:0002616;9.21e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.76e-15,114;UBERON:0010371,1.07e-11,104;UBERON:0000073,2.11e-10,53;UBERON:0002616,2.11e-10,53;UBERON:0001049,7.53e-10,56;UBERON:0005068,7.53e-10,56;UBERON:0006241,7.53e-10,56;UBERON:0007135,7.53e-10,56;UBERON:0000479,2.20e-09,773;UBERON:0003075,1.38e-08,82;UBERON:0007284,1.38e-08,82;UBERON:0002780,4.30e-08,41;UBERON:0001890,4.30e-08,41;UBERON:0003080,4.30e-08,41;UBERON:0006240,4.30e-08,41;UBERON:0002346,1.15e-07,86;UBERON:0003056,1.43e-07,61;UBERON:0000955,6.27e-07,68;UBERON:0006238,6.27e-07,68 | |||
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| ||
|short_description=p1@MBD1 | |short_description=p1@MBD1 | ||
}} | }} |
Latest revision as of 18:16, 19 September 2015
Short description: | p1@MBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MBD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000353909, ENST00000398493_5end |
EntrezGene: | MBD1 |
HGNC: | 6916 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.48e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.76e-15 | 114 |
ecto-epithelium | 1.07e-11 | 104 |
regional part of nervous system | 2.11e-10 | 53 |
regional part of brain | 2.11e-10 | 53 |
neural tube | 7.53e-10 | 56 |
neural rod | 7.53e-10 | 56 |
future spinal cord | 7.53e-10 | 56 |
neural keel | 7.53e-10 | 56 |
tissue | 2.20e-09 | 773 |
neural plate | 1.38e-08 | 82 |
presumptive neural plate | 1.38e-08 | 82 |
regional part of forebrain | 4.30e-08 | 41 |
forebrain | 4.30e-08 | 41 |
anterior neural tube | 4.30e-08 | 41 |
future forebrain | 4.30e-08 | 41 |
neurectoderm | 1.15e-07 | 86 |
pre-chordal neural plate | 1.43e-07 | 61 |
brain | 6.27e-07 | 68 |
future brain | 6.27e-07 | 68 |