FFCP PHASE1:Hg19::chr1:201708502..201708514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89796 | |EntrezGene=89796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |HGNC=15989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_ENST00000490213_5end | |association_with_transcript=57bp_to_ENST00000490213_5end | ||
|cluster_id=chr1:201708502..201708514,+ | |||
|coexpression_cluster_id=C2549 | |||
|description=CAGE_peak_24_at_NAV1_5end | |description=CAGE_peak_24_at_NAV1_5end | ||
|id=chr1:201708502..201708514,+ | |id=chr1:201708502..201708514,+ | ||
|ontology_enrichment_celltype=CL:0002494!7.02e-08!16;CL:0000128!3.59e-07!7;CL:0000126!3.59e-07!7;CL:0000127!3.59e-07!7;CL:0002453!3.59e-07!7 | |ontology_enrichment_celltype=CL:0002494!7.02e-08!16;CL:0000128!3.59e-07!7;CL:0000126!3.59e-07!7;CL:0000127!3.59e-07!7;CL:0002453!3.59e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002549;2.02e-13;2!CL:0000064;9.80e-09;3!CL:0000067;9.80e-09;3!CL:0005012;9.80e-09;3!CL:0002615;9.80e-09;3!CL:0002304;9.80e-09;3!CL:0002603;9.80e-09;3!CL:0000708;1.81e-08;3!CL:0002616;2.23e-07;1!CL:0000306;5.14e-07;4!CL:0002222;5.14e-07;4!CL:0002224;5.14e-07;4!CL:0000342;5.77e-07;1!CL:0002565;5.77e-07;1!CL:0002581;5.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,2.03e-13,2;CL:0002603,8.74e-09,3;CL:0002615,1.24e-08,3;CL:0000064,1.44e-08,3;CL:0000067,1.44e-08,3;CL:0005012,1.44e-08,3;CL:0002304,1.44e-08,3;CL:0000708,2.03e-08,3;CL:0002616,1.98e-07,1;CL:0002581,5.45e-07,1;CL:0000306,5.46e-07,4;CL:0002222,5.46e-07,4;CL:0002224,5.46e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.77e-07;1!UBERON:0010115;5.77e-07;1!UBERON:0004140;5.77e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;5.77e-07;1!DOID:326;5.77e-07;1!DOID:3978;5.77e-07;1!DOID:3394;5.77e-07;1!DOID:5844;5.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,3.01e-07,1;DOID:326,3.01e-07,1;DOID:3978,3.01e-07,1;DOID:3394,3.01e-07,1;DOID:5844,3.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!2.57e-14!27;UBERON:0003075!3.29e-11!86;UBERON:0007284!3.29e-11!86;UBERON:0000948!3.57e-11!24;UBERON:0005498!3.57e-11!24;UBERON:0004140!3.57e-11!24;UBERON:0009881!3.57e-11!24;UBERON:0004141!3.57e-11!24;UBERON:0003084!3.57e-11!24;UBERON:0007005!3.57e-11!24;UBERON:0004139!3.57e-11!24;UBERON:0004291!3.57e-11!24;UBERON:0002346!2.93e-10!90;UBERON:0002616!2.02e-09!59;UBERON:0007023!1.77e-08!115;UBERON:0000119!7.94e-08!312;UBERON:0001049!8.00e-08!57;UBERON:0005068!8.00e-08!57;UBERON:0006241!8.00e-08!57;UBERON:0007135!8.00e-08!57;UBERON:0004733!8.14e-08!12;UBERON:0002028!8.14e-08!12;UBERON:0007277!8.14e-08!12;UBERON:0001017!1.24e-07!82;UBERON:0005743!1.63e-07!86;UBERON:0000955!1.76e-07!69;UBERON:0006238!1.76e-07!69;UBERON:0001009!2.33e-07!113;UBERON:0003103!2.45e-07!69;UBERON:0002680!3.42e-07!9;UBERON:0001895!3.42e-07!9;UBERON:0010092!3.42e-07!9;UBERON:0003076!4.08e-07!15;UBERON:0003057!4.08e-07!15;UBERON:0004732!4.68e-07!13;UBERON:0000025!7.36e-07!194 | |ontology_enrichment_uberon=UBERON:0007100!2.57e-14!27;UBERON:0003075!3.29e-11!86;UBERON:0007284!3.29e-11!86;UBERON:0000948!3.57e-11!24;UBERON:0005498!3.57e-11!24;UBERON:0004140!3.57e-11!24;UBERON:0009881!3.57e-11!24;UBERON:0004141!3.57e-11!24;UBERON:0003084!3.57e-11!24;UBERON:0007005!3.57e-11!24;UBERON:0004139!3.57e-11!24;UBERON:0004291!3.57e-11!24;UBERON:0002346!2.93e-10!90;UBERON:0002616!2.02e-09!59;UBERON:0007023!1.77e-08!115;UBERON:0000119!7.94e-08!312;UBERON:0001049!8.00e-08!57;UBERON:0005068!8.00e-08!57;UBERON:0006241!8.00e-08!57;UBERON:0007135!8.00e-08!57;UBERON:0004733!8.14e-08!12;UBERON:0002028!8.14e-08!12;UBERON:0007277!8.14e-08!12;UBERON:0001017!1.24e-07!82;UBERON:0005743!1.63e-07!86;UBERON:0000955!1.76e-07!69;UBERON:0006238!1.76e-07!69;UBERON:0001009!2.33e-07!113;UBERON:0003103!2.45e-07!69;UBERON:0002680!3.42e-07!9;UBERON:0001895!3.42e-07!9;UBERON:0010092!3.42e-07!9;UBERON:0003076!4.08e-07!15;UBERON:0003057!4.08e-07!15;UBERON:0004732!4.68e-07!13;UBERON:0000025!7.36e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.39e-13;4!UBERON:0005629;2.02e-13;2!UBERON:0005358;2.02e-13;2!UBERON:0001886;2.02e-13;2!UBERON:0004086;2.02e-13;2!UBERON:0005282;2.02e-13;2!UBERON:0005281;2.02e-13;2!UBERON:0006876;2.48e-13;11!UBERON:0007625;3.05e-13;11!UBERON:0005406;1.13e-12;2!UBERON:0001801;2.36e-10;14!UBERON:0002037;3.21e-09;6!UBERON:0003688;3.21e-09;6!UBERON:0002203;3.21e-09;6!UBERON:0001768;3.21e-09;6!UBERON:0002200;3.21e-09;6!UBERON:0002358;3.21e-09;6!UBERON:0003684;3.21e-09;6!UBERON:0001178;3.21e-09;6!UBERON:0001778;9.80e-09;3!UBERON:0001775;9.80e-09;3!UBERON:0003210;1.81e-08;3!UBERON:0007100;9.05e-08;25!UBERON:0000019;1.47e-07;19!UBERON:0000047;1.47e-07;19!UBERON:0004088;1.47e-07;19!UBERON:0010230;1.47e-07;19!UBERON:0002146;2.23e-07;1!UBERON:0005623;2.23e-07;1!UBERON:0000970;3.63e-07;20!UBERON:0010077;5.14e-07;4!UBERON:0005389;5.14e-07;4!UBERON:0000484;5.14e-07;4!UBERON:0000965;5.14e-07;4!UBERON:0001803;5.14e-07;4!UBERON:0002363;5.77e-07;1!UBERON:0002084;5.77e-07;1!UBERON:0002082;5.77e-07;1!UBERON:0002506;5.77e-07;1!UBERON:0001769;5.77e-07;1!UBERON:0002104;8.22e-07;21!UBERON:0001456;8.22e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.03e-13,2;UBERON:0005358,2.03e-13,2;UBERON:0001886,2.03e-13,2;UBERON:0004086,2.03e-13,2;UBERON:0005282,2.03e-13,2;UBERON:0005281,2.03e-13,2;UBERON:0000488,3.28e-13,4;UBERON:0006876,4.16e-13,11;UBERON:0007625,5.37e-13,11;UBERON:0005406,9.55e-13,2;UBERON:0001801,3.66e-10,14;UBERON:0001009,9.27e-10,112;UBERON:0002037,2.80e-09,6;UBERON:0006215,2.80e-09,6;UBERON:0003688,3.41e-09,6;UBERON:0002358,3.41e-09,6;UBERON:0003684,3.41e-09,6;UBERON:0001178,3.41e-09,6;UBERON:0002203,5.64e-09,6;UBERON:0001768,5.64e-09,6;UBERON:0002200,5.64e-09,6;UBERON:0004535,1.00e-08,109;UBERON:0001778,1.44e-08,3;UBERON:0001775,1.44e-08,3;UBERON:0003210,2.03e-08,3;UBERON:0002146,1.75e-07,1;UBERON:0005623,1.75e-07,1;UBERON:0007100,3.16e-07,27;UBERON:0002363,3.82e-07,1;UBERON:0007645,3.82e-07,1;UBERON:0007647,3.82e-07,1;UBERON:0010115,3.82e-07,1;UBERON:0000019,4.88e-07,20;UBERON:0000047,4.88e-07,20;UBERON:0010312,4.88e-07,20;UBERON:0004088,4.88e-07,20;UBERON:0010230,4.88e-07,20;UBERON:0003072,4.88e-07,20;UBERON:0004128,4.88e-07,20;UBERON:0003071,4.88e-07,20;UBERON:0010077,5.46e-07,4;UBERON:0005389,5.46e-07,4;UBERON:0000484,5.46e-07,4;UBERON:0002546,5.46e-07,4;UBERON:0000965,5.46e-07,4;UBERON:0001803,5.46e-07,4;UBERON:0003073,5.46e-07,4;UBERON:0005426,5.46e-07,4;UBERON:0002084,6.49e-07,1;UBERON:0002082,6.49e-07,1;UBERON:0010226,6.49e-07,1;UBERON:0002049,7.06e-07,78;UBERON:0007798,7.06e-07,78 | |||
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|short_description=p24@NAV1 | |short_description=p24@NAV1 | ||
}} | }} |
Latest revision as of 18:51, 19 September 2015
Short description: | p24@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_NAV1_5end |
Coexpression cluster: | C2549_Fibroblast_Lens_Astrocyte_heart_Ciliary_liposarcoma_Adipocyte |
Association with transcript: | 57bp_to_ENST00000490213_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 2.03e-13 | 2 |
astrocyte of the cerebellum | 8.74e-09 | 3 |
adipocyte of omentum tissue | 1.24e-08 | 3 |
ciliated cell | 1.44e-08 | 3 |
ciliated epithelial cell | 1.44e-08 | 3 |
multi-ciliated epithelial cell | 1.44e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.44e-08 | 3 |
leptomeningeal cell | 2.03e-08 | 3 |
perirenal adipocyte cell | 1.98e-07 | 1 |
perirenal preadipocyte | 5.45e-07 | 1 |
crystallin accumulating cell | 5.46e-07 | 4 |
vertebrate lens cell | 5.46e-07 | 4 |
lens epithelial cell | 5.46e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 3.01e-07 | 1 |
ischemia | 3.01e-07 | 1 |
extrinsic cardiomyopathy | 3.01e-07 | 1 |
myocardial ischemia | 3.01e-07 | 1 |
myocardial infarction | 3.01e-07 | 1 |