FFCP PHASE1:Hg19::chr19:54376940..54376951,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |UniProt=Q96S97 | ||
|association_with_transcript=-44bp_to_AK027693_5end | |association_with_transcript=-44bp_to_AK027693_5end | ||
|cluster_id=chr19:54376940..54376951,+ | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_21_at_MYADM_5end | |description=CAGE_peak_21_at_MYADM_5end | ||
|id=chr19:54376940..54376951,+ | |id=chr19:54376940..54376951,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.53e-13!42;CL:0000860!8.82e-12!45;CL:0000766!1.91e-11!76;CL:0000557!2.47e-10!71;CL:0000048!1.20e-09!430;CL:0000723!1.71e-09!436;CL:0000034!6.18e-09!444;CL:0000839!1.27e-08!70;CL:0002009!3.64e-08!65;CL:0002194!1.04e-07!63;CL:0000576!1.04e-07!63;CL:0000040!1.04e-07!63;CL:0000559!1.04e-07!63;CL:0000134!1.08e-07!358;CL:0000763!1.13e-07!112;CL:0000049!1.13e-07!112;CL:0002320!1.58e-07!365 | |ontology_enrichment_celltype=CL:0002057!1.53e-13!42;CL:0000860!8.82e-12!45;CL:0000766!1.91e-11!76;CL:0000557!2.47e-10!71;CL:0000048!1.20e-09!430;CL:0000723!1.71e-09!436;CL:0000034!6.18e-09!444;CL:0000839!1.27e-08!70;CL:0002009!3.64e-08!65;CL:0002194!1.04e-07!63;CL:0000576!1.04e-07!63;CL:0000040!1.04e-07!63;CL:0000559!1.04e-07!63;CL:0000134!1.08e-07!358;CL:0000763!1.13e-07!112;CL:0000049!1.13e-07!112;CL:0002320!1.58e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.76e-35;33!CL:0002057;4.76e-35;33!CL:0000473;1.70e-25;39!CL:0000234;1.70e-25;39!CL:0000576;2.27e-16;48!CL:0000766;5.49e-14;69!CL:0000763;1.13e-07;100!CL:0000775;1.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.35e-31,42;CL:0002057,8.35e-31,42;CL:0000473,4.89e-28,48;CL:0000234,4.89e-28,48;CL:0000766,1.42e-26,72;CL:0000557,2.44e-23,67;CL:0000839,2.97e-22,66;CL:0002194,1.25e-20,59;CL:0000576,1.25e-20,59;CL:0000040,1.25e-20,59;CL:0000559,1.25e-20,59;CL:0002009,1.11e-19,61;CL:0000763,2.90e-15,108;CL:0000049,2.90e-15,108;CL:0000738,8.80e-11,136;CL:0002031,9.56e-10,120;CL:0002032,3.07e-08,161;CL:0000837,3.07e-08,161;CL:0002087,3.88e-08,115;CL:0000048,1.19e-07,427;CL:0000775,1.54e-07,3;CL:0000037,1.65e-07,168;CL:0000134,1.76e-07,354;CL:0000723,2.64e-07,433;CL:0002320,4.78e-07,361;CL:0000034,7.33e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-09!80;UBERON:0002204!5.89e-09!167;UBERON:0001474!2.07e-08!86;UBERON:0003081!2.84e-08!216;UBERON:0002384!8.67e-08!375;UBERON:0004765!7.67e-07!101;UBERON:0001434!7.67e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!1.24e-09!80;UBERON:0002204!5.89e-09!167;UBERON:0001474!2.07e-08!86;UBERON:0003081!2.84e-08!216;UBERON:0002384!8.67e-08!375;UBERON:0004765!7.67e-07!101;UBERON:0001434!7.67e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.06e-21,76;UBERON:0001474,6.27e-20,82;UBERON:0004765,2.84e-17,90;UBERON:0002405,1.94e-16,93;UBERON:0001434,1.17e-15,100;UBERON:0002390,5.78e-14,98;UBERON:0003061,5.78e-14,98;UBERON:0002204,4.60e-13,167;UBERON:0002193,8.04e-13,108;UBERON:0003081,3.90e-11,203;UBERON:0000926,1.68e-08,315;UBERON:0004120,1.68e-08,315;UBERON:0006603,1.68e-08,315;UBERON:0002384,7.28e-07,371 | |||
|phase1_expression=0.54503513781167,2.14100523890983,0.704772020479856,1.0007329835313,1.78784437770915,0.872338524100369,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,1.02000345622126,0.626909442956176,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0.919421224478927,0.90361775633475,0,0,0,0.293600439334847,0,1.60435557976113,0.434021741431704,0,0,0,5.96132778996215,3.02300754951048,3.15359279544161,4.18372266430232,3.70051099219643,2.47765096716083,2.3015391385772,2.81776777182011,0.47296445977717,1.72372840368309,0.645484683583826,2.70852973188684,6.02375486536335,4.63940455098338,0.674170453335254,8.87643287875617,2.24650318953266,4.47535988059329,1.9791078011203,2.99195486432448,2.98357325372886,8.12585868160035,3.97169657283798,3.11411124497787,3.51748131359441,2.60741459210101,2.38907729175628,1.81619850790011,0.736555271975129,1.58231193720442,0,0,0,0.22465726229299,0.300353785683013,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0,0,0,0.263384084775077,0,1.17903228824749,0.616804496998528,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.434473211648397,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,1.22031028774085,0,1.62028389576352,0,0.22452937262617,0.112611480483322,0,0,0.366403487860815,2.63560834872127,0,0,0.993943903390637,0.379891534993739,0.397227542439656,0.286836620748814,0.354668382198357,0,1.06748995729705,0.98667019366864,0.622422070799533,0.67355336034844,0.490385709340376,0.302714855289863,0,0,0.624320153660641,0,0.747243402759005,0.704606991862589,0.485618833104395,0,0,0.122834317311768,0.103325781175765,1.18800285728205,1.48360157567134,0,2.15585442544872,0,0.125118519871964,0.554128230968366,0,1.5324389789951,0.45071417671979,0,1.4351170855109,0,0.423863802319124,1.20036438433761,0.618315175430633,1.03056216018252,0.558350568994769,0.843881661206331,1.07180705677318,0.757301322732344,0.368199594569197,0.323292113637624,1.42003837006646,0.403008392910561,0.67824236924195,0,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0.36497735907583,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0.4115740113314,2.94017422771084,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.402115889646523,0.0925884451585296,0,0,0,0.231860809950154,0.352226082707465,0.433099343283221,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0.290633938513962,0.383382679165211,0.985326475791887,0.44024217006613,2.90259361757081,1.58531948758658,1.51490920111656,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0,0.1466765716419,0.387815147273333,0,0.845302752556,0,2.08014873822732,0,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,2.10833939483032,0.479249710983165,0,0,0.579125226670317,0.821905290201534,0.179060963239896,0,0.197030760201927,0.431255149719035,0.256686072559497,0.508189248444927,0,0,0.167516265334349,1.27587750330633,8.23907726341901,11.966458368161,2.07207756718018,0.49076596687656,0,0,1.24782516918484,1.07057393278297,0.630809660135739,1.05427273493442,0,0,0,0,0.184369168541703,0.521301686808497,0.195801157462741,0.686286847621712,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0.30239029332968,0.496215615637554,0.61384789315225,1.12264037773229,0.128139149255701,0,0.321707842287215,0,1.23367755042124,0.710246901252508,0.246381468041427,1.55776328755086,0.929683027679674,0.120859449591622,0.802025881213139,0,0.574072240823034,0.728364672026868,0.786746489756545,0,0.15403067420883,0,0,0.211103257785751,1.13733384070897,0,0.647747748306418,4.62681758070868,0.812839312631559,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,1.30012049207304,1.6068392984416,0.096670718292122,0.308097234229289,0.307007349452259,0.689182862422653,0.107420244868274,0,0.170453254832202,0.623224249527161,0,0.384380134730212,0,0.10115778085555,0,2.20368642781448,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0,0.762520775695299,0.255897791311334,1.28381696410176,0.636406495851874,0.78494864019923,0,0.54907405947211,0.471249609382746,0.202182481573316,0,1.68503382495592,0,1.94970791705028,2.11300293513511,0.272999822815972,1.27264888758341,1.13008116620243,0,0.66343897524122,1.31535265576129,0.578775534266688,0,0,0.92947049429925,0.563391205064483,0.286822704408103,0.392996164052485,0.35667105148125,1.06428319221179,0.211107635297664,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| ||
|short_description=p21@MYADM | |short_description=p21@MYADM | ||
}} | }} |
Latest revision as of 20:08, 19 September 2015
Short description: | p21@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | -44bp_to_AK027693_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.35e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.35e-31 | 42 |
defensive cell | 4.89e-28 | 48 |
phagocyte | 4.89e-28 | 48 |
myeloid leukocyte | 1.42e-26 | 72 |
granulocyte monocyte progenitor cell | 2.44e-23 | 67 |
myeloid lineage restricted progenitor cell | 2.97e-22 | 66 |
monopoietic cell | 1.25e-20 | 59 |
monocyte | 1.25e-20 | 59 |
monoblast | 1.25e-20 | 59 |
promonocyte | 1.25e-20 | 59 |
macrophage dendritic cell progenitor | 1.11e-19 | 61 |
myeloid cell | 2.90e-15 | 108 |
common myeloid progenitor | 2.90e-15 | 108 |
leukocyte | 8.80e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 9.56e-10 | 120 |
hematopoietic oligopotent progenitor cell | 3.07e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.07e-08 | 161 |
nongranular leukocyte | 3.88e-08 | 115 |
multi fate stem cell | 1.19e-07 | 427 |
neutrophil | 1.54e-07 | 3 |
hematopoietic stem cell | 1.65e-07 | 168 |
mesenchymal cell | 1.76e-07 | 354 |
somatic stem cell | 2.64e-07 | 433 |
connective tissue cell | 4.78e-07 | 361 |
stem cell | 7.33e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.06e-21 | 76 |
bone element | 6.27e-20 | 82 |
skeletal element | 2.84e-17 | 90 |
immune system | 1.94e-16 | 93 |
skeletal system | 1.17e-15 | 100 |
hematopoietic system | 5.78e-14 | 98 |
blood island | 5.78e-14 | 98 |
musculoskeletal system | 4.60e-13 | 167 |
hemolymphoid system | 8.04e-13 | 108 |
lateral plate mesoderm | 3.90e-11 | 203 |
mesoderm | 1.68e-08 | 315 |
mesoderm-derived structure | 1.68e-08 | 315 |
presumptive mesoderm | 1.68e-08 | 315 |
connective tissue | 7.28e-07 | 371 |