FFCP PHASE1:Hg19::chr12:65004238..65004284,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:65004238..65004284,+ to FFCP PHASE1:Hg19::chr12:65004238..65004284,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283349 | |EntrezGene=283349 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14271 | |HGNC=14271 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WH2,Q496A9 | |UniProt=Q86WH2,Q496A9 | ||
|association_with_transcript=-8bp_to_ENST00000283172,ENST00000336061,ENST00000541539,ENST00000542104,NM_178169,NR_040718,uc001ssd.2,uc009zqn.2_5end | |||
|cluster_id=chr12:65004238..65004284,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_RASSF3_5end | |||
|id=chr12:65004238..65004284,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.21e-30!140;CL:0002087!1.01e-28!119;CL:0002031!3.48e-23!124;CL:0002057!1.26e-22!42;CL:0000766!3.37e-22!76;CL:0002032!1.37e-21!165;CL:0000837!1.37e-21!165;CL:0000037!2.30e-21!172;CL:0000566!2.30e-21!172;CL:0000860!6.07e-21!45;CL:0000988!1.70e-20!182;CL:0002194!2.08e-20!63;CL:0000576!2.08e-20!63;CL:0000040!2.08e-20!63;CL:0000559!2.08e-20!63;CL:0002009!6.56e-20!65;CL:0000557!7.83e-18!71;CL:0000839!4.56e-16!70;CL:0000763!1.73e-13!112;CL:0000049!1.73e-13!112;CL:0000791!2.45e-08!18;CL:0000789!2.45e-08!18;CL:0002420!2.45e-08!18;CL:0002419!2.45e-08!18;CL:0000790!2.45e-08!18;CL:0000542!4.26e-08!53;CL:0000051!4.26e-08!53;CL:0000838!5.88e-08!52;CL:0000115!3.19e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.26e-18;33!CL:0002057;6.26e-18;33!CL:0000473;1.25e-16;39!CL:0000234;1.25e-16;39!CL:0000576;1.49e-13;48!CL:0000766;1.40e-10;69!CL:0002087;2.53e-09;104!CL:0000791;2.24e-08;18!CL:0000789;2.24e-08;18!CL:0002419;2.24e-08;18!CL:0000738;2.24e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.89e-31,136;CL:0002087,1.93e-29,115;CL:0000473,1.76e-24,48;CL:0000234,1.76e-24,48;CL:0002031,1.00e-23,120;CL:0000766,3.86e-23,72;CL:0000860,1.26e-22,42;CL:0002057,1.26e-22,42;CL:0002032,6.33e-22,161;CL:0000837,6.33e-22,161;CL:0000037,1.13e-21,168;CL:0002194,1.77e-21,59;CL:0000576,1.77e-21,59;CL:0000040,1.77e-21,59;CL:0000559,1.77e-21,59;CL:0002009,6.51e-21,61;CL:0000988,1.60e-20,177;CL:0000557,1.25e-18,67;CL:0000839,8.61e-17,66;CL:0000763,8.12e-14,108;CL:0000049,8.12e-14,108;CL:0000791,2.45e-08,18;CL:0000789,2.45e-08,18;CL:0002420,2.45e-08,18;CL:0002419,2.45e-08,18;CL:0000790,2.45e-08,18;CL:0000542,4.26e-08,53;CL:0000051,4.26e-08,53;CL:0000838,5.88e-08,52;CL:0000115,1.94e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-16;42!CL:0000790;2.24e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.65e-20!112;UBERON:0002390!1.02e-18!102;UBERON:0003061!1.02e-18!102;UBERON:0003081!4.50e-16!216;UBERON:0002371!7.14e-13!80;UBERON:0001474!1.10e-11!86;UBERON:0002405!5.92e-11!115;UBERON:0000178!7.96e-08!15;UBERON:0000179!7.96e-08!15;UBERON:0000463!7.96e-08!15;UBERON:0001009!9.54e-08!113;UBERON:0004765!2.81e-07!101;UBERON:0001434!2.81e-07!101;UBERON:0004535!6.39e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.65e-08;15!UBERON:0000179;7.65e-08;15!UBERON:0000463;7.65e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.99e-20,108;UBERON:0002390,2.93e-19,98;UBERON:0003061,2.93e-19,98;UBERON:0003081,9.08e-18,203;UBERON:0002405,2.04e-14,93;UBERON:0002371,2.41e-13,76;UBERON:0001474,4.55e-12,82;UBERON:0000926,1.90e-10,315;UBERON:0004120,1.90e-10,315;UBERON:0006603,1.90e-10,315;UBERON:0004765,6.71e-08,90;UBERON:0000178,7.96e-08,15;UBERON:0000179,7.96e-08,15;UBERON:0000463,7.96e-08,15;UBERON:0001009,1.26e-07,112;UBERON:0004535,8.37e-07,109 | |||
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| ||
|short_description=p1@RASSF3 | |||
}} | }} |
Latest revision as of 21:10, 19 September 2015
Short description: | p1@RASSF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASSF3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -8bp_to_ENST00000283172, ENST00000336061, ENST00000541539, ENST00000542104, NM_178169, NR_040718, uc001ssd.2, uc009zqn.2_5end |
EntrezGene: | RASSF3 |
HGNC: | 14271 |
UniProt: | Q86WH2Q496A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.99e-20 | 108 |
hematopoietic system | 2.93e-19 | 98 |
blood island | 2.93e-19 | 98 |
lateral plate mesoderm | 9.08e-18 | 203 |
immune system | 2.04e-14 | 93 |
bone marrow | 2.41e-13 | 76 |
bone element | 4.55e-12 | 82 |
mesoderm | 1.90e-10 | 315 |
mesoderm-derived structure | 1.90e-10 | 315 |
presumptive mesoderm | 1.90e-10 | 315 |
skeletal element | 6.71e-08 | 90 |
blood | 7.96e-08 | 15 |
haemolymphatic fluid | 7.96e-08 | 15 |
organism substance | 7.96e-08 | 15 |
circulatory system | 1.26e-07 | 112 |
cardiovascular system | 8.37e-07 | 109 |