FFCP PHASE1:Hg19::chr1:93645890..93645908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50999 | |EntrezGene=50999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24251 | |HGNC=24251 | ||
|TSSclassifier=strong | |||
|UniProt=B1AKT4 | |UniProt=B1AKT4 | ||
|association_with_transcript=9bp_to_ENST00000479918_5end | |association_with_transcript=9bp_to_ENST00000479918_5end | ||
|cluster_id=chr1:93645890..93645908,- | |||
|description=CAGE_peak_2_at_TMED5_5end | |description=CAGE_peak_2_at_TMED5_5end | ||
|id=chr1:93645890..93645908,- | |id=chr1:93645890..93645908,- | ||
|ontology_enrichment_celltype=CL:0000860!2.85e-19!45;CL:0002057!5.66e-19!42;CL:0000012!1.69e-18!682;CL:0000766!1.90e-18!76;CL:0002009!2.61e-18!65;CL:0000548!1.55e-17!679;CL:0000004!1.55e-17!679;CL:0000255!1.55e-17!679;CL:0002194!4.19e-17!63;CL:0000576!4.19e-17!63;CL:0000040!4.19e-17!63;CL:0000559!4.19e-17!63;CL:0000763!6.74e-17!112;CL:0000049!6.74e-17!112;CL:0000557!8.98e-17!71;CL:0000839!5.00e-14!70;CL:0000063!6.20e-14!578;CL:0000003!1.81e-10!722;CL:0000144!3.14e-10!625;CL:0000219!5.31e-09!390;CL:0000134!8.66e-09!358;CL:0000034!1.68e-08!444;CL:0002320!3.61e-08!365;CL:0000048!1.55e-07!430;CL:0000723!2.03e-07!436;CL:0000037!2.29e-07!172;CL:0000566!2.29e-07!172;CL:0002371!9.12e-07!591 | |ontology_enrichment_celltype=CL:0000860!2.85e-19!45;CL:0002057!5.66e-19!42;CL:0000012!1.69e-18!682;CL:0000766!1.90e-18!76;CL:0002009!2.61e-18!65;CL:0000548!1.55e-17!679;CL:0000004!1.55e-17!679;CL:0000255!1.55e-17!679;CL:0002194!4.19e-17!63;CL:0000576!4.19e-17!63;CL:0000040!4.19e-17!63;CL:0000559!4.19e-17!63;CL:0000763!6.74e-17!112;CL:0000049!6.74e-17!112;CL:0000557!8.98e-17!71;CL:0000839!5.00e-14!70;CL:0000063!6.20e-14!578;CL:0000003!1.81e-10!722;CL:0000144!3.14e-10!625;CL:0000219!5.31e-09!390;CL:0000134!8.66e-09!358;CL:0000034!1.68e-08!444;CL:0002320!3.61e-08!365;CL:0000048!1.55e-07!430;CL:0000723!2.03e-07!436;CL:0000037!2.29e-07!172;CL:0000566!2.29e-07!172;CL:0002371!9.12e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-18;33!CL:0002057;1.05e-18;33!CL:0000473;4.57e-14;39!CL:0000234;4.57e-14;39!CL:0000576;4.73e-12;48!CL:0000766;2.45e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.87e-21,42;CL:0002057,9.87e-21,42;CL:0002009,1.17e-20,61;CL:0000766,1.35e-20,72;CL:0000473,1.93e-19,48;CL:0000234,1.93e-19,48;CL:0002194,2.79e-19,59;CL:0000576,2.79e-19,59;CL:0000040,2.79e-19,59;CL:0000559,2.79e-19,59;CL:0000557,1.03e-18,67;CL:0000763,9.52e-18,108;CL:0000049,9.52e-18,108;CL:0000839,1.52e-15,66;CL:0000134,2.51e-08,354;CL:0000219,5.64e-08,386;CL:0000034,6.31e-08,441;CL:0000037,1.09e-07,168;CL:0002320,1.41e-07,361;CL:0000738,1.79e-07,136;CL:0000988,2.78e-07,177;CL:0000223,4.53e-07,58;CL:0000048,5.53e-07,427;CL:0000723,6.29e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.70e-15;42 | |||
|ontology_enrichment_disease=DOID:162!1.94e-15!235;DOID:14566!6.42e-15!239;DOID:0050687!1.95e-11!143;DOID:305!1.82e-10!106 | |ontology_enrichment_disease=DOID:162!1.94e-15!235;DOID:14566!6.42e-15!239;DOID:0050687!1.95e-11!143;DOID:305!1.82e-10!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.63e-13,235;DOID:14566,7.30e-13,239;DOID:0050687,3.46e-11,143;DOID:305,9.36e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0001474!3.35e-14!86;UBERON:0002371!1.16e-13!80;UBERON:0004765!5.12e-13!101;UBERON:0001434!5.12e-13!101;UBERON:0002405!3.50e-11!115;UBERON:0002390!5.65e-09!102;UBERON:0003061!5.65e-09!102;UBERON:0000926!9.64e-09!448;UBERON:0004120!9.64e-09!448;UBERON:0006603!9.64e-09!448;UBERON:0002384!4.18e-08!375;UBERON:0002204!1.20e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.10e-16,82;UBERON:0004765,5.44e-16,90;UBERON:0002371,2.10e-15,76;UBERON:0001434,3.54e-13,100;UBERON:0002390,2.81e-10,98;UBERON:0003061,2.81e-10,98;UBERON:0002405,9.66e-09,93;UBERON:0002193,1.18e-07,108;UBERON:0002204,2.43e-07,167;UBERON:0002384,3.22e-07,371 | |||
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| ||
|short_description=p2@TMED5 | |short_description=p2@TMED5 | ||
}} | }} |
Latest revision as of 21:23, 19 September 2015
Short description: | p2@TMED5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMED5_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000479918_5end |
EntrezGene: | TMED5 |
HGNC: | 24251 |
UniProt: | B1AKT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.87e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.87e-21 | 42 |
macrophage dendritic cell progenitor | 1.17e-20 | 61 |
myeloid leukocyte | 1.35e-20 | 72 |
defensive cell | 1.93e-19 | 48 |
phagocyte | 1.93e-19 | 48 |
monopoietic cell | 2.79e-19 | 59 |
monocyte | 2.79e-19 | 59 |
monoblast | 2.79e-19 | 59 |
promonocyte | 2.79e-19 | 59 |
granulocyte monocyte progenitor cell | 1.03e-18 | 67 |
myeloid cell | 9.52e-18 | 108 |
common myeloid progenitor | 9.52e-18 | 108 |
myeloid lineage restricted progenitor cell | 1.52e-15 | 66 |
mesenchymal cell | 2.51e-08 | 354 |
motile cell | 5.64e-08 | 386 |
stem cell | 6.31e-08 | 441 |
hematopoietic stem cell | 1.09e-07 | 168 |
connective tissue cell | 1.41e-07 | 361 |
leukocyte | 1.79e-07 | 136 |
hematopoietic cell | 2.78e-07 | 177 |
endodermal cell | 4.53e-07 | 58 |
multi fate stem cell | 5.53e-07 | 427 |
somatic stem cell | 6.29e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.10e-16 | 82 |
skeletal element | 5.44e-16 | 90 |
bone marrow | 2.10e-15 | 76 |
skeletal system | 3.54e-13 | 100 |
hematopoietic system | 2.81e-10 | 98 |
blood island | 2.81e-10 | 98 |
immune system | 9.66e-09 | 93 |
hemolymphoid system | 1.18e-07 | 108 |
musculoskeletal system | 2.43e-07 | 167 |
connective tissue | 3.22e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.63e-13 | 235 |
disease of cellular proliferation | 7.30e-13 | 239 |
cell type cancer | 3.46e-11 | 143 |
carcinoma | 9.36e-11 | 106 |