FFCP PHASE1:Hg19::chr2:211469821..211469857,+: Difference between revisions
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|id=chr2:211469821..211469857,+
|short_description=p8@CPS1
|description=CAGE_peak_8_at_CPS1_5end
|association_with_transcript=132bp_to_ENST00000467353_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1373 | |EntrezGene=1373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2323 | |HGNC=2323 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=132bp_to_ENST00000467353_5end | |||
|cluster_id=chr2:211469821..211469857,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_8_at_CPS1_5end | |||
|id=chr2:211469821..211469857,+ | |||
|ontology_enrichment_celltype=CL:0002150!9.45e-11!3;CL:0000861!9.45e-11!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.10e-33;29 | |||
|ontology_enrichment_disease=DOID:305!3.82e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.93e-14,106;DOID:0050687,7.11e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.12e-29!9;UBERON:0001557!5.08e-13!19;UBERON:0008947!7.17e-10!38;UBERON:0003258!7.17e-10!38;UBERON:0001007!1.81e-09!155;UBERON:0001555!1.81e-09!155;UBERON:0007026!1.81e-09!155;UBERON:0004119!6.18e-09!169;UBERON:0000925!6.18e-09!169;UBERON:0006595!6.18e-09!169;UBERON:0000072!1.10e-07!46;UBERON:0004921!3.80e-07!129;UBERON:0004185!3.80e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.92e-90;9!UBERON:0001557;8.92e-90;9!UBERON:0000072;1.15e-23;37!UBERON:0000065;1.77e-19;44!UBERON:0001004;8.88e-09;65!UBERON:0002108;9.20e-09;4!UBERON:0002107;1.19e-08;19!UBERON:0006925;1.19e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.91e-90,9;UBERON:0001557,5.38e-42,19;UBERON:0008947,3.43e-25,38;UBERON:0003258,3.43e-25,38;UBERON:0001041,1.59e-20,87;UBERON:0000072,4.17e-20,47;UBERON:0004921,3.77e-19,118;UBERON:0000065,2.55e-17,54;UBERON:0001007,3.67e-15,145;UBERON:0001555,3.67e-15,145;UBERON:0007026,3.67e-15,145;UBERON:0004119,1.61e-13,160;UBERON:0000925,1.61e-13,160;UBERON:0006595,1.61e-13,160;UBERON:0001004,2.96e-12,74;UBERON:0001048,3.65e-10,160;UBERON:0011216,7.38e-09,223;UBERON:0002108,1.08e-08,4;UBERON:0002107,1.27e-08,19;UBERON:0006925,1.27e-08,19;UBERON:0008836,1.27e-08,19;UBERON:0008835,1.81e-07,22;UBERON:0003894,1.81e-07,22;UBERON:0009854,3.77e-07,23 | |||
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| ||
|short_description=p8@CPS1 | |||
}} | }} |
Latest revision as of 22:30, 19 September 2015
Short description: | p8@CPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CPS1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 132bp_to_ENST00000467353_5end |
EntrezGene: | CPS1 |
HGNC: | 2323 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 9.91e-90 | 9 |
upper respiratory tract | 5.38e-42 | 19 |
respiratory primordium | 3.43e-25 | 38 |
endoderm of foregut | 3.43e-25 | 38 |
foregut | 1.59e-20 | 87 |
segment of respiratory tract | 4.17e-20 | 47 |
subdivision of digestive tract | 3.77e-19 | 118 |
respiratory tract | 2.55e-17 | 54 |
digestive system | 3.67e-15 | 145 |
digestive tract | 3.67e-15 | 145 |
primitive gut | 3.67e-15 | 145 |
endoderm-derived structure | 1.61e-13 | 160 |
endoderm | 1.61e-13 | 160 |
presumptive endoderm | 1.61e-13 | 160 |
respiratory system | 2.96e-12 | 74 |
primordium | 3.65e-10 | 160 |
organ system subdivision | 7.38e-09 | 223 |
small intestine | 1.08e-08 | 4 |
liver | 1.27e-08 | 19 |
digestive gland | 1.27e-08 | 19 |
liver bud | 1.27e-08 | 19 |
hepatic diverticulum | 1.81e-07 | 22 |
liver primordium | 1.81e-07 | 22 |
digestive tract diverticulum | 3.77e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.93e-14 | 106 |
cell type cancer | 7.11e-10 | 143 |