FFCP PHASE1:Hg19::chr17:38020481..38020506,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22806 | |EntrezGene=22806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |HGNC=13178 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKT9 | |UniProt=Q9UKT9 | ||
|association_with_transcript=-40bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2, | |association_with_transcript=-40bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2,uc00 | ||
|cluster_id=chr17:38020481..38020506,- | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_7_at_IKZF3_5end | |description=CAGE_peak_7_at_IKZF3_5end | ||
|id=chr17:38020481..38020506,- | |id=chr17:38020481..38020506,- | ||
|ontology_enrichment_celltype=CL:0000542!4.98e-55!53;CL:0000051!4.98e-55!53;CL:0000838!6.40e-54!52;CL:0000945!4.25e-27!24;CL:0000826!4.25e-27!24;CL:0000738!4.55e-26!140;CL:0002087!2.65e-25!119;CL:0000084!5.17e-24!25;CL:0000827!5.17e-24!25;CL:0002031!7.09e-23!124;CL:0000791!1.30e-22!18;CL:0000789!1.30e-22!18;CL:0002420!1.30e-22!18;CL:0002419!1.30e-22!18;CL:0000790!1.30e-22!18;CL:0000037!1.46e-22!172;CL:0000566!1.46e-22!172;CL:0000988!3.12e-22!182;CL:0002032!7.46e-20!165;CL:0000837!7.46e-20!165;CL:0000236!4.02e-18!14;CL:0000625!2.48e-15!11;CL:0000624!4.73e-08!6;CL:0000080!9.05e-07!6 | |ontology_enrichment_celltype=CL:0000542!4.98e-55!53;CL:0000051!4.98e-55!53;CL:0000838!6.40e-54!52;CL:0000945!4.25e-27!24;CL:0000826!4.25e-27!24;CL:0000738!4.55e-26!140;CL:0002087!2.65e-25!119;CL:0000084!5.17e-24!25;CL:0000827!5.17e-24!25;CL:0002031!7.09e-23!124;CL:0000791!1.30e-22!18;CL:0000789!1.30e-22!18;CL:0002420!1.30e-22!18;CL:0002419!1.30e-22!18;CL:0000790!1.30e-22!18;CL:0000037!1.46e-22!172;CL:0000566!1.46e-22!172;CL:0000988!3.12e-22!182;CL:0002032!7.46e-20!165;CL:0000837!7.46e-20!165;CL:0000236!4.02e-18!14;CL:0000625!2.48e-15!11;CL:0000624!4.73e-08!6;CL:0000080!9.05e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.98e-45;53!CL:0000084;8.70e-37;25!CL:0000791;1.82e-36;18!CL:0000789;1.82e-36;18!CL:0002419;1.82e-36;18!CL:0000945;1.69e-31;24!CL:0000236;6.41e-28;13!CL:0000625;2.05e-24;11!CL:0002087;3.23e-13;104!CL:0000624;2.77e-12;6!CL:0000738;8.91e-08;136!CL:0000226;3.24e-07;3!CL:0000842;3.24e-07;3!CL:0000623;3.84e-07;3!CL:0000988;5.63e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.30e-75,53;CL:0000051,1.30e-75,53;CL:0000838,8.62e-74,52;CL:0002087,1.53e-39,115;CL:0000738,1.11e-38,136;CL:0000084,8.62e-37,25;CL:0000827,8.62e-37,25;CL:0000791,1.17e-36,18;CL:0000789,1.17e-36,18;CL:0002420,1.17e-36,18;CL:0002419,1.17e-36,18;CL:0000790,1.17e-36,18;CL:0002031,2.42e-32,120;CL:0000037,4.73e-32,168;CL:0000945,1.66e-31,24;CL:0000826,1.66e-31,24;CL:0000988,1.46e-29,177;CL:0002032,1.27e-28,161;CL:0000837,1.27e-28,161;CL:0000236,1.11e-25,14;CL:0000625,1.73e-24,11;CL:0000624,2.31e-12,6;CL:0000623,3.88e-07,3;CL:0000825,3.88e-07,3;CL:0000226,3.96e-07,3;CL:0000842,3.96e-07,3;CL:0000134,5.51e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;2.98e-45;53!CL:0000790;1.82e-36;18 | |||
|ontology_enrichment_disease=DOID:0060058!5.03e-07!10 | |ontology_enrichment_disease=DOID:0060058!5.03e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;9.56e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.22e-09,10;DOID:2531,8.89e-07,51;DOID:0060083,8.89e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.40e-16!15;UBERON:0000179!3.40e-16!15;UBERON:0000463!3.40e-16!15;UBERON:0007023!1.30e-10!115;UBERON:0004177!1.47e-08!7 | |ontology_enrichment_uberon=UBERON:0000178!3.40e-16!15;UBERON:0000179!3.40e-16!15;UBERON:0000463!3.40e-16!15;UBERON:0007023!1.30e-10!115;UBERON:0004177!1.47e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.14e-17;15!UBERON:0000179;1.14e-17;15!UBERON:0000463;1.14e-17;15!UBERON:0002390;8.88e-15;32!UBERON:0002193;4.58e-10;42!UBERON:0004177;6.19e-10;5!UBERON:0005057;6.19e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-17,15;UBERON:0000179,1.15e-17,15;UBERON:0000463,1.15e-17,15;UBERON:0004177,3.33e-13,7;UBERON:0005057,3.33e-13,7;UBERON:0002370,1.77e-08,4;UBERON:0005058,1.77e-08,4;UBERON:0009113,1.77e-08,4;UBERON:0003295,1.77e-08,4;UBERON:0005562,1.77e-08,4;UBERON:0002193,4.67e-07,108;UBERON:0002390,6.90e-07,98;UBERON:0003061,6.90e-07,98 | |||
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| ||
|short_description=p7@IKZF3 | |short_description=p7@IKZF3 | ||
}} | }} |
Latest revision as of 23:08, 19 September 2015
Short description: | p7@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IKZF3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -40bp_to_ENST00000293068, ENST00000346872, ENST00000348427, ENST00000377944, ENST00000377945, ENST00000377952, ENST00000377958, ENST00000394189, ENST00000488188, ENST00000535189, NM_012481, NM_183228, NM_183229, NM_183230, NM_183231, NM_183232, uc002hsu.2, uc002hsv.2, uc00 |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | Q9UKT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.30e-75 | 53 |
common lymphoid progenitor | 1.30e-75 | 53 |
lymphoid lineage restricted progenitor cell | 8.62e-74 | 52 |
nongranular leukocyte | 1.53e-39 | 115 |
leukocyte | 1.11e-38 | 136 |
T cell | 8.62e-37 | 25 |
pro-T cell | 8.62e-37 | 25 |
mature alpha-beta T cell | 1.17e-36 | 18 |
alpha-beta T cell | 1.17e-36 | 18 |
immature T cell | 1.17e-36 | 18 |
mature T cell | 1.17e-36 | 18 |
immature alpha-beta T cell | 1.17e-36 | 18 |
hematopoietic lineage restricted progenitor cell | 2.42e-32 | 120 |
hematopoietic stem cell | 4.73e-32 | 168 |
lymphocyte of B lineage | 1.66e-31 | 24 |
pro-B cell | 1.66e-31 | 24 |
hematopoietic cell | 1.46e-29 | 177 |
hematopoietic oligopotent progenitor cell | 1.27e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-28 | 161 |
B cell | 1.11e-25 | 14 |
CD8-positive, alpha-beta T cell | 1.73e-24 | 11 |
CD4-positive, alpha-beta T cell | 2.31e-12 | 6 |
natural killer cell | 3.88e-07 | 3 |
pro-NK cell | 3.88e-07 | 3 |
single nucleate cell | 3.96e-07 | 3 |
mononuclear cell | 3.96e-07 | 3 |
mesenchymal cell | 5.51e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
blood | 1.15e-17 | 15 |
haemolymphatic fluid | 1.15e-17 | 15 |
organism substance | 1.15e-17 | 15 |
hemopoietic organ | 3.33e-13 | 7 |
immune organ | 3.33e-13 | 7 |
thymus | 1.77e-08 | 4 |
hemolymphoid system gland | 1.77e-08 | 4 |
thymic region | 1.77e-08 | 4 |
pharyngeal gland | 1.77e-08 | 4 |
thymus primordium | 1.77e-08 | 4 |
hemolymphoid system | 4.67e-07 | 108 |
hematopoietic system | 6.90e-07 | 98 |
blood island | 6.90e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.22e-09 | 10 |
hematologic cancer | 8.89e-07 | 51 |
immune system cancer | 8.89e-07 | 51 |