FFCP PHASE1:Hg19::chr6:82462377..82462405,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55603 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18345 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003pjh.1_5end | |||
|cluster_id=chr6:82462377..82462405,- | |||
|description=CAGE_peak_1_at_FAM46A_5end | |||
|id=chr6:82462377..82462405,- | |||
|ontology_enrichment_celltype=CL:0000766!1.07e-19!76;CL:0000557!9.99e-19!71;CL:0000839!6.26e-17!70;CL:0002320!6.96e-17!365;CL:0000134!1.83e-16!358;CL:0002009!1.22e-15!65;CL:0000763!3.92e-15!112;CL:0000049!3.92e-15!112;CL:0002194!4.53e-15!63;CL:0000576!4.53e-15!63;CL:0000040!4.53e-15!63;CL:0000559!4.53e-15!63;CL:0000860!2.70e-13!45;CL:0000048!7.63e-13!430;CL:0000219!5.23e-12!390;CL:0000723!5.27e-12!436;CL:0002057!8.59e-12!42;CL:0000034!4.17e-11!444;CL:0000738!7.92e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.98e-09;48!CL:0000860;1.54e-08;33!CL:0002057;1.54e-08;33!CL:0000766;1.88e-08;69!CL:0000473;1.10e-07;39!CL:0000234;1.10e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.02e-18,72;CL:0000557,4.60e-17,67;CL:0002320,2.64e-16,361;CL:0000134,6.78e-16,354;CL:0000839,2.61e-15,66;CL:0002009,4.90e-14,61;CL:0000763,1.17e-13,108;CL:0000049,1.17e-13,108;CL:0002194,1.78e-13,59;CL:0000576,1.78e-13,59;CL:0000040,1.78e-13,59;CL:0000559,1.78e-13,59;CL:0000048,1.84e-12,427;CL:0000473,5.64e-12,48;CL:0000234,5.64e-12,48;CL:0000860,8.46e-12,42;CL:0002057,8.46e-12,42;CL:0000723,1.26e-11,433;CL:0000219,1.64e-11,386;CL:0000034,9.80e-11,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.54e-17!86;UBERON:0002371!2.17e-17!80;UBERON:0002384!1.07e-16!375;UBERON:0004765!1.63e-15!101;UBERON:0001434!1.63e-15!101;UBERON:0002390!6.76e-15!102;UBERON:0003061!6.76e-15!102;UBERON:0002204!4.70e-13!167;UBERON:0002193!7.99e-11!112;UBERON:0000926!2.09e-10!448;UBERON:0004120!2.09e-10!448;UBERON:0006603!2.09e-10!448;UBERON:0002405!1.14e-09!115;UBERON:0000479!1.26e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.86e-16,371;UBERON:0001474,5.65e-16,82;UBERON:0002371,8.60e-16,76;UBERON:0004765,5.15e-15,90;UBERON:0001434,2.30e-14,100;UBERON:0002390,2.10e-13,98;UBERON:0003061,2.10e-13,98;UBERON:0002204,2.84e-12,167;UBERON:0002193,1.46e-09,108;UBERON:0002405,3.86e-09,93;UBERON:0000926,5.44e-09,315;UBERON:0004120,5.44e-09,315;UBERON:0006603,5.44e-09,315;UBERON:0000479,9.48e-08,773 | |||
|phase1_expression=9.26559734279839,12.846031433459,45.3873181189027,11.0080628188443,38.4386541207467,65.4253893075277,7.59899634504932,55.5913488615611,9.40268261519419,9.58362352355885,1.39560233594486,6.11635841964482,4.48403862988371,32.7980835344124,21.2094320465866,4.70627602516243,9.04041792035965,6.57279081348636,5.85519358548608,3.44738962615006,1.63200552995402,2.19418305034661,8.01460763966959,4.51685602740518,3.76627918784408,17.8043235392726,13.9571002064908,14.7976268869717,44.4501632839262,51.8169687431237,37.7751340891225,0.919421224478927,1.8072355126695,0.739508020333575,0.542270404062111,0,16.4416246027514,53.1835592190602,51.7404674472966,50.3465220060776,40.0808698889465,28.5026426096702,28.8484635750289,17.1569921759886,16.6265415223076,23.0454858128425,16.5024616203036,13.9797081927421,24.1570969298181,95.5138742509539,45.5966057621799,56.5192529433719,61.0199854903815,31.6287494956075,69.0675081631143,11.8592673911841,16.3743690034707,12.1350681600346,93.3555871731253,41.07891546574,62.015701202507,159.318177990184,71.6074530861658,102.293940127847,56.3005922939453,19.8584828641899,27.4041789558053,104.770693412062,63.0994331288444,74.0613960444448,135.609488589875,52.2954243102342,65.824176587704,29.153229511048,43.1586728929038,24.7397201699884,25.6109279014009,32.4382088537654,29.4127823655657,31.6364145552786,38.9876687310217,32.5142193701048,3.51992488922645,7.64594055766984,5.33705552318133,32.004766692488,10.0098996759003,10.9202963591352,11.2377628373427,12.4026988089597,6.83055562931338,10.5702694086769,7.64546456250458,10.5737062863221,28.5859367120583,26.6017925622828,18.4907183907003,13.3623659334716,12.130488440971,0.83593247695339,4.56291173287027,3.78758244587787,13.6378709885538,1.22551502573691,3.82987679717288,4.2091439970888,2.16643091012012,1.0247305578054,2.47112760363769,0.986627427622057,1.10540007114339,0.579606171470105,7.8591878475892,3.21048993707656,3.1360657141493,0,1.53288197440768,3.09264700934367,1.77113784413652,3.82278497188916,3.90650072313851,4.75226022224187,10.3896832163663,5.50342427963999,7.49584359314075,5.20909954496837,2.46338399076314,18.7494271199001,13.1045695933919,20.4202409474747,9.75227465255847,9.38981203585091,9.33396701457771,19.156275076382,20.0535164254356,29.6935363869689,27.8350081467885,74.4551351563033,12.8567351343132,26.8292570929702,28.1071314218003,14.2112296915018,2.91436230634034,2.96627554227544,20.446485800245,16.3681953061311,15.4231234201884,11.2090593423511,13.1558829479429,8.91498003190956,3.18019851786728,8.60234595106124,2.08284300964557,4.52246353539208,1.67799774483962,1.10047216776027,3.9709043641994,3.10100111003195,1.42306505074684,0.66944122552934,0,0.760272105718513,0.24406205754817,1.47065232138347,4.86085168729056,1.3394959242612,2.69435247151404,0.900891843866578,1.53316637465883,2.84779697870439,1.28241220751285,22.4026709641308,62.0448422637321,1.3082821564276,33.2971207635863,18.2347936796995,29.2624289597214,62.8172199439902,21.9894396962981,7.8494864019923,4.2699598291882,4.19334832309172,12.7596524513904,4.44545217829971,3.26923806226917,12.4113090668844,28.2326202995199,27.8842503882218,10.9256026890612,4.56377457235559,10.6108563191779,7.16350441726966,10.6836143282967,6.60118791500568,11.432633590274,2.7023549808589,26.1414226374687,68.9041657223591,62.5585331074749,8.19145225744224,6.46756327634615,6.22843621630045,5.50521487436642,8.86605169549385,30.2894558407778,30.3422917841029,51.6818922638693,5.33131260852099,142.255981101268,117.456563850212,43.4460397377102,50.4153041421796,40.7057490491834,144.793983505644,83.5664684928838,52.8269919915163,38.4876170386735,61.5938409155639,35.0710113827161,47.3622946479119,96.9176187570357,50.5775533102754,32.0469519466822,3.28543450377605,3.27295344709002,0.860413786167011,1.21973706129595,0.530119073285941,2.67246068599892,4.5610864206763,2.01856680700503,0,32.8544017892614,50.1727931790451,13.8134921352481,4.64367928031979,9.38443326170461,69.682705223468,85.6410225596757,105.080809029198,66.2866776121688,71.2465782182168,90.4001058813278,37.6179349766859,43.1687223275761,44.6306702057813,0.738155454624648,2.80483547606892,2.8810180793198,4.41026134156626,49.434463580514,53.0726697005918,37.8105540276099,0,22.2609073763036,43.406656005527,0.658501712451753,1.1240175325762,1.20634766893957,1.85176890317059,21.1775398451711,2.07986957055916,5.77325368101093,23.5338722099406,23.4817388471643,0.288732895522148,0,0.380508304469197,26.8669495306154,24.8960987007513,32.5006448035364,15.9122900294682,20.5111003958445,4.68669169933885,3.35964256397719,1.98485136139341,0.985143749731331,1.45316969256981,1.15014803749563,91.1426990107495,39.7098437399649,326.334453861175,259.271796197114,238.471956742432,3.4923841860693,7.63976851116555,3.51652341630141,6.84289784090821,3.08482478109971,8.10926256178577,13.4338423336372,3.81245686774226,2.61576041299968,4.1069440059732,29.2154077612578,14.3062578340753,10.988935783228,12.233153362904,4.16029747645464,7.45901385360212,2.83698264046557,6.66055447540248,9.86548156241218,72.1686735170619,2.46972101034231,9.12061316022458,9.95097456479128,19.7987968233357,3.61727252471503,6.10073421020206,5.19859554146697,38.919609805181,23.6060832973099,10.5416969741516,16.5341150289192,29.8641033168696,19.9691667057006,24.6128221334885,68.6290917318281,47.4511552585723,2.12961773587702,31.7219523925103,23.9346608094064,32.8558172876156,29.4749764098058,9.10978977003352,3.86644406388848,1.84267891867784,0,26.9642528620986,35.899375104483,26.5225928599063,35.5805325985506,24.0081850108645,14.9195763034855,12.2702808303176,11.7763132606127,14.9817294282238,34.9081416678285,68.0138185384645,40.9333507300773,22.7640756843511,44.5031151018743,24.1523610789631,25.9782007259568,4.69922777910577,6.86286847621712,32.6693481274162,52.4185507989239,28.4962579335196,12.7313580007429,6.65741758041988,10.8860505598685,18.3599777785895,30.9993186041886,36.7664723707326,47.7959026723765,15.8629247210678,44.0739743933485,35.6203359467978,19.4304214191346,38.7084561182617,39.0103991065593,29.0782480342828,31.376802184189,25.3804844142407,3.20810352485256,9.11601790465374,40.9887579947646,31.501772065162,16.5216762848874,0.902399225814824,1.69433741629712,0,2.92278449306521,7.8108205380728,0,1.19065593693561,1.94324324491925,0,1.35473218771926,0.501689773854853,2.03901018436031,4.15538004464362,0.895499018888713,8.77039506583738,8.10449898177192,13.0789563809358,10.1684540166909,30.9109474931088,168.987259102265,137.445766692333,169.887060336491,0.574265537996172,1.30012049207304,44.9915003563647,15.080632053571,8.3186253241908,8.90321313411551,3.03240459465967,15.7907759956362,16.6769198001363,6.81813019328807,15.2244780955921,11.4046591599075,6.3422722230485,8.80527716212631,24.277867405332,94.8284920566463,164.332045045594,35.5489007781906,20.3302162916219,10.6461206063404,39.1469846433783,2.40921484835096,12.4518651465532,20.096551945422,2.53103539774981,8.57835872657212,2.81487570442467,23.1087053538317,23.5470403465193,7.06453776179307,10.0728576246656,15.3740736652191,13.901863476791,4.65019707618627,12.6808256938407,4.21258456238981,1.46290121726877,65.0715017315529,21.1300293513511,11.8754922924948,45.3911436571418,30.5121914874656,18.7464216805682,9.28814565337708,15.3457809838817,5.78775534266688,9.83842128069949,6.29022168584383,10.2241754372918,8.45086807596724,11.4729081763241,6.18968958382663,4.9933947207375,6.74046021734136,41.1659888830445,27.3314761156719,2.65631221636001,7.34862912514464,2.02066436723575,1.34060455107157,1.08890984861323,180.097090885979,1.29151611801369,1.68471475667626,0.886860307073351,0.689170200620878,21.3127995877511,17.5866557642746,18.7983571767474,18.105614934792,23.4476495659131,22.0480925805524,17.2810059916197,20.621254583651,0.213648142254946,25.0244762368473,3.67560323971548,0,0,5.33563825113106,9.08729754554287,10.9768654288049,36.1945149550173,18.6272752797017,167.829543121945,23.5869629615305,1.14117339516596,132.707871719751,67.6713088143181,7.44883822327054,16.5405717356811,22.6015672053973,138.400027249356,133.623579109992,147.47556686806,187.216902305952,188.205831851033,78.9367905424243,0.278406173895242,2.46174797895425,0.540911356951966,6.32836739195858,4.22961015263549,35.9309837583782,36.4805366387016,23.1798596541571,0,0.284136146806413,72.8170678449954,139.57339999134,49.7600337400756,2.98244294329889,1.82870241333667,26.04623697536,2.96646973608167,2.74463030566391,43.8345574152353,19.3398740871803,28.7203332553875,14.2153468677995,12.8008197679512,2.48831670129446,8.3577566567014,14.8587574980756,7.67358555340308,45.4746099986264,19.1586473877552,16.6705485216955,3.87733098438087,2.41197055220813,0,18.2299432759663,8.30869999963859,14.4999915086959,1.0241410345695,8.64462410995405,11.3466087248609,0.344743373241465,4.66567381413207,3.64612489359914,7.08593108651071,3.61789315876224,10.6807215421958,8.40402375477307,5.6154047601174,16.234519389394,20.5893696050891,25.0962739701486,52.2492255240782,24.7254261187993,27.6676685265672,5.65473159781564,1.3037684630641,63.481230786652,25.1893381855121,74.6248686426089,0,30.4541697406348,4.32150372940407,0.225595660617181,0.980312671588698,1.00692952185506,0.569261198172555,18.9134528986651,0.210998064528027,9.30427006507142,35.903680144221,9.30471150890992,14.9289289661776,62.5394981038608,17.7198742030751,13.0469296619474,4.07760998523459,2.8193926366473,4.44847477672468,32.1031058919516,4.91955336023212,0,9.97889556553658,13.5957012539092,84.4410622097696,18.1486074072996,3.0607276163049,49.601465008363,15.1826653608637,15.1384759439981,2.65861549082874,7.28182302926097,5.33685961292283,4.77889719091835,11.9536009332513,0,0.347119476670262,11.5631028948966,33.6048537400354,73.0357473251686,1.37588825977293,78.372628344159,87.4148232350779,73.411218605569,14.9363085392166,0.0882561266915003,47.9079170454729,3.70013196546227,4.76915068087175,2.65905343014691,37.741416867817,15.470652308546,62.968633448109,5.79447867788178,9.79814836647921,0,23.5085147070891,11.8124934350283,5.83986917157533,27.1048139809315,8.56196498263768,7.74061062711266,20.909634615446,28.3171578103489,1.20084057741958,3.9702559878678,77.9254187208531,29.653815457977,25.7629607193728,134.893399814499,87.3101215484515,89.7341280721018,20.9662950523941,48.9317694875691,76.5478099025623,124.222240627957,27.7430910327651,8.15471646692177,17.3323001075892,16.6480033929956,18.3337639283383,18.3075115617433,0,0.795229689809303,4.35850899557042,2.08979093004525,2.33817042215297,2.9080823662043,44.3198566356456,34.0472860005498,2.91597871958518,20.4615159435552,10.717576192691,9.54673504056965,4.32961379729567,68.4877636251467,18.8076893373056,32.8759850131749,50.3189897477728,0,63.5309534051844,49.2606249984723,78.3809664262582,2.39460383124975,4.10462603746695,62.0212399298935,4.07923529472452,26.2328498283768,13.2506888912221,1.80996138906171,5.15707146796491,4.44825778499256,0.704815022316672,23.9203804151636,51.4058077675908,22.3689089887486,7.44249032717926,0,0.730755590285376,22.9802852797265,10.8803560673895,8.0220766087264,11.3347863402481,11.4755420748432,0.471162288750703,0,0.854183854313742,1.1267183763585,8.60113793535107,15.1972800605488,6.95479712943495,5.25724812757677,2.87454938312845,15.1649117541648,4.85291067026445,8.94010114853052,36.9984575587436,19.854180919683,23.8807684618998,41.1335425331115,59.3642271807796,28.4104507912634,45.0306544137109,57.8377294037748,28.1473284128216,20.1137128605108,20.2068360757615,19.5168797986317,15.6110831820428,7.64665290678128,22.0473398764288,56.4000442663563,23.9257543102195,15.652351854352,54.2429968479959,26.2755596396469,45.5695221189221,16.5482279874329,15.7893518852458,39.9069033495505,19.1086026575336,8.00055529326307,34.6829662234621,48.1551768935264,22.7132816811572,2.31143796488764,4.07439023612359,11.2227545545041,18.3631799664941,51.8610342485388,17.1315693154527,4.83539870920016,1.23520578864389,3.0699766941019,13.6050642378328,4.43702288023104,9.79866155787821,0,0.345430341731199,25.2203763627227,1.93561810612423,14.8093834717935,14.8808621150967,16.1929740313286,45.5377689896514,52.8411753820497,1.05656061679314,7.79950843834227,12.4829323742145,2.75543967457305,2.27006381426734,13.6238403186362,11.0504811098361,36.7025583419454,0.895260599125562,5.39124056983409,11.6376796973363,0,1.86705782949428,28.6976142137272,57.878001908954,2.23457967189298,6.04208266241495,0,82.4587870734034,71.5932165692088,12.5560645714812,3.14723202972652,0,3.35231104020018,1.64093091392604,1.00828678488687,2.21303207885497,3.06803726700517,4.28308260777463,10.0110672871046,7.3141228475599,7.8874297364322,6.46943730441894,25.171218300833,2.7614397042404,22.6764493212553,67.6140851859823,22.9943778322013,7.03362610109783,2.3571602503328,6.38710478289377,9.61064560410794,1.89105236931505,0.781078098613847,3.30698874401895,2.21955335678674,1.09394961803644,173.797712093727,36.2234160224185,147.555974017722,8.94336993477167,144.639495687137,37.6637768885083,49.7711795474038,71.0306037016049,338.133435059979,4.95506146489851,17.1488009437418,3.12660771693426,1.77586488619693,2.36387681767936,3.44817345865414,59.0268058235865,2.04250266890802,33.0721152710271,30.1342377768134,4.96633459802829,21.0210742670302,18.512424941754,2.84424501118908,0,12.1700790611806,23.2496295771773,14.0906991630865,12.8038857820462,11.7514142508396,159.614350122323,9.11156405625353,13.2080777376694,154.95966036988,15.1210533239073,4.6530957849648,6.68877257284203,4.25050640831611,11.0909763985225,18.4096066723227,5.17943069750316,15.3994210284371,23.196288626764,52.4567872503871,5.38060765962843,0.994753875806841,11.0595684423139,2.14597555874024,0.879524133963433,31.0983457747347,109.664478671389,26.4457068209788,53.1458544888521,50.9908509248123,26.3957732753821,2.55201007249429,8.31729920915841,19.4421634688364,16.8227843540939,19.8306066937491,20.6265241515447,0.999411559249289,5.35661815816973,5.29342307573538,2.40724100067505,22.640428035642,205.05198968183,5.0168854103008,2.68211655728414,1.8357702351547,1.30905207102113,47.0833888058706,81.8389039966853,41.1336309481962,49.319428082112,0.378499274505237,0.218531143927391,1.26698501011437,1.1218771271618,0.26721740526556,7.35159196278759,0,33.3426272160253,11.5224575967157,0.829169439458779,5.37851578481855,38.3821167421766,21.6638632632004,3.61697895081634,14.9600061453018,7.62496665548171,24.313214462259,32.5408674222733,23.9488422686657,28.7475972911636,11.5845531185091,46.1173780674909,81.5017873537733,5.45401899693529,27.9625646199615,46.3373477488656,2.69475606319761,49.2745979047254,47.5519217871351,27.6689401254702,110.515624514795,21.7375697078308,0.320568492303233 | |||
|short_description=p1@FAM46A | |||
}} |
Latest revision as of 23:13, 19 September 2015
Short description: | p1@FAM46A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM46A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003pjh.1_5end |
EntrezGene: | FAM46A |
HGNC: | 18345 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.02e-18 | 72 |
granulocyte monocyte progenitor cell | 4.60e-17 | 67 |
connective tissue cell | 2.64e-16 | 361 |
mesenchymal cell | 6.78e-16 | 354 |
myeloid lineage restricted progenitor cell | 2.61e-15 | 66 |
macrophage dendritic cell progenitor | 4.90e-14 | 61 |
myeloid cell | 1.17e-13 | 108 |
common myeloid progenitor | 1.17e-13 | 108 |
monopoietic cell | 1.78e-13 | 59 |
monocyte | 1.78e-13 | 59 |
monoblast | 1.78e-13 | 59 |
promonocyte | 1.78e-13 | 59 |
multi fate stem cell | 1.84e-12 | 427 |
defensive cell | 5.64e-12 | 48 |
phagocyte | 5.64e-12 | 48 |
classical monocyte | 8.46e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.46e-12 | 42 |
somatic stem cell | 1.26e-11 | 433 |
motile cell | 1.64e-11 | 386 |
stem cell | 9.80e-11 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.86e-16 | 371 |
bone element | 5.65e-16 | 82 |
bone marrow | 8.60e-16 | 76 |
skeletal element | 5.15e-15 | 90 |
skeletal system | 2.30e-14 | 100 |
hematopoietic system | 2.10e-13 | 98 |
blood island | 2.10e-13 | 98 |
musculoskeletal system | 2.84e-12 | 167 |
hemolymphoid system | 1.46e-09 | 108 |
immune system | 3.86e-09 | 93 |
mesoderm | 5.44e-09 | 315 |
mesoderm-derived structure | 5.44e-09 | 315 |
presumptive mesoderm | 5.44e-09 | 315 |
tissue | 9.48e-08 | 773 |