FFCP PHASE1:Hg19::chr2:21233386..21233397,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |||
|TSSclassifier=strong | |||
|UniProt=P04114 | |||
|association_with_transcript=0bp_to_M17779_5end | |||
|cluster_id=chr2:21233386..21233397,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_22_at_APOB_5end | |||
|id=chr2:21233386..21233397,- | |||
|ontology_enrichment_celltype=CL:0000181!5.37e-41!12;CL:0000417!5.37e-41!12;CL:0000668!5.37e-41!12;CL:0000414!5.37e-41!12;CL:0000412!5.37e-41!12;CL:0000182!5.37e-41!12;CL:0000223!4.00e-14!59;CL:0002563!1.16e-08!4;CL:0002322!6.18e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.88e-67;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.39e-67,12;CL:0000223,9.85e-18,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.17e-37;11!UBERON:0009497;1.11e-31;13!UBERON:0001041;8.09e-14;30!UBERON:0003104;2.38e-13;31!CL:0000223;4.22e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.65e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!2.44e-32!19;UBERON:0006925!2.44e-32!19;UBERON:0008836!2.44e-32!19;UBERON:0008835!9.44e-28!22;UBERON:0003894!9.44e-28!22;UBERON:0009854!1.73e-26!23;UBERON:0007499!2.91e-24!25;UBERON:0009497!2.91e-24!25;UBERON:0000015!2.91e-24!25;UBERON:0002423!2.91e-24!25;UBERON:0006235!2.91e-24!25;UBERON:0004161!2.91e-24!25;UBERON:0005057!2.80e-23!26;UBERON:0009856!2.80e-23!26;UBERON:0002365!2.62e-19!31;UBERON:0002330!2.62e-19!31;UBERON:0003929!9.99e-19!54;UBERON:0002368!6.03e-17!35;UBERON:0004921!3.37e-14!129;UBERON:0004185!3.37e-14!129;UBERON:0002530!3.69e-14!59;UBERON:0000949!7.09e-13!45;UBERON:0000160!8.64e-13!27;UBERON:0005172!1.11e-12!55;UBERON:0005173!1.11e-12!55;UBERON:0005911!1.31e-11!82;UBERON:0001007!2.64e-11!155;UBERON:0001555!2.64e-11!155;UBERON:0007026!2.64e-11!155;UBERON:0002417!2.84e-11!61;UBERON:0000916!2.84e-11!61;UBERON:0004119!4.11e-10!169;UBERON:0000925!4.11e-10!169;UBERON:0006595!4.11e-10!169;UBERON:0005409!9.01e-10!35;UBERON:0000998!6.22e-09!1;UBERON:0006868!6.22e-09!1;UBERON:0001242!1.16e-08!4;UBERON:0001262!1.16e-08!4;UBERON:0004786!1.16e-08!4;UBERON:0004808!1.16e-08!4;UBERON:0001277!1.16e-08!4;UBERON:0001155!3.21e-08!9;UBERON:0003350!4.29e-07!5;UBERON:0000059!8.31e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.73e-42;25!UBERON:0002365;3.33e-33;31!UBERON:0002330;3.33e-33;31!UBERON:0002368;5.39e-28;33!UBERON:0000949;6.32e-22;43!UBERON:0002108;3.37e-14;4!UBERON:0001007;4.82e-13;81!UBERON:0005172;8.01e-13;52!UBERON:0005173;8.01e-13;52!UBERON:0002417;1.17e-11;58!UBERON:0000916;1.17e-11;58!UBERON:0002530;5.67e-11;57!UBERON:0000160;7.65e-09;17!UBERON:0005409;4.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.89e-55,19;UBERON:0006925,3.89e-55,19;UBERON:0008836,3.89e-55,19;UBERON:0008835,1.39e-47,22;UBERON:0003894,1.39e-47,22;UBERON:0009854,1.68e-45,23;UBERON:0007499,7.73e-42,25;UBERON:0009497,7.73e-42,25;UBERON:0000015,7.73e-42,25;UBERON:0002423,7.73e-42,25;UBERON:0006235,7.73e-42,25;UBERON:0004161,7.73e-42,25;UBERON:0009856,3.23e-40,26;UBERON:0002365,1.12e-33,31;UBERON:0002330,1.12e-33,31;UBERON:0002368,8.69e-30,35;UBERON:0003929,3.67e-24,54;UBERON:0000949,4.45e-23,45;UBERON:0005172,3.71e-19,54;UBERON:0005173,3.71e-19,54;UBERON:0002530,1.71e-17,59;UBERON:0002417,3.42e-17,60;UBERON:0000916,3.42e-17,60;UBERON:0004921,5.32e-16,118;UBERON:0005911,1.06e-15,82;UBERON:0002108,3.60e-14,4;UBERON:0001007,6.98e-13,145;UBERON:0001555,6.98e-13,145;UBERON:0007026,6.98e-13,145;UBERON:0001041,1.09e-11,87;UBERON:0004119,1.34e-11,160;UBERON:0000925,1.34e-11,160;UBERON:0006595,1.34e-11,160;UBERON:0005177,5.49e-10,101;UBERON:0009569,6.05e-09,112;UBERON:0000160,7.86e-09,17;UBERON:0003914,1.55e-08,117;UBERON:0000490,2.26e-08,148;UBERON:0005256,3.70e-08,122;UBERON:0011216,6.09e-08,223 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,7.86261773342101,6.49868897349544,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,5.12090684996954,4.36804049420182,4.4486338943762,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00652811080656,5.02686989159102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@APOB | |||
}} |
Latest revision as of 23:31, 19 September 2015
Short description: | p22@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_M17779_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.39e-67 | 12 |
endodermal cell | 9.85e-18 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.65e-07 | 39 |