FFCP PHASE2:Hg19::chr22:35806354..35806377,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4174 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6948 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6948 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 00:04, 20 September 2015
Short description: | p4@MCM5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MCM5_5end |
Coexpression cluster: | C4095_CD14CD16_B_Eosinophils_CD14_Basophils_Neutrophils_CD19 |
Association with transcript: | 2bp_to_ENST00000464908_5end |
EntrezGene: | MCM5 |
HGNC: | 6948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@MCM5 |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.95e-87 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.95e-87 | 42 |
defensive cell | 9.30e-79 | 48 |
phagocyte | 9.30e-79 | 48 |
myeloid leukocyte | 2.50e-76 | 72 |
monopoietic cell | 3.41e-75 | 59 |
monocyte | 3.41e-75 | 59 |
monoblast | 3.41e-75 | 59 |
promonocyte | 3.41e-75 | 59 |
macrophage dendritic cell progenitor | 2.20e-72 | 61 |
Showing 1 to 10 of 42 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.44e-60 | 98 |
blood island | 3.44e-60 | 98 |
bone marrow | 5.74e-56 | 76 |
hemolymphoid system | 1.91e-53 | 108 |
bone element | 4.57e-51 | 82 |
immune system | 3.42e-48 | 93 |
skeletal element | 1.54e-45 | 90 |
skeletal system | 7.21e-40 | 100 |
lateral plate mesoderm | 1.45e-23 | 203 |
musculoskeletal system | 2.12e-19 | 167 |
Showing 1 to 10 of 14 entries