FFCP PHASE1:Hg19::chr3:122513887..122513992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84925 | |EntrezGene=84925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16628 | |HGNC=16628 | ||
|TSSclassifier=strong | |||
|UniProt=Q05BS2,Q96SL1 | |UniProt=Q05BS2,Q96SL1 | ||
|association_with_transcript=0bp_to_ENST00000477647,NM_032839,uc003efw.3,uc010hrl.2,uc010hrm.2_5end | |association_with_transcript=0bp_to_ENST00000477647,NM_032839,uc003efw.3,uc010hrl.2,uc010hrm.2_5end | ||
|cluster_id=chr3:122513887..122513992,+ | |||
|coexpression_cluster_id=C2707 | |coexpression_cluster_id=C2707 | ||
|description=CAGE_peak_1_at_DIRC2_5end | |description=CAGE_peak_1_at_DIRC2_5end | ||
|id=chr3:122513887..122513992,+ | |id=chr3:122513887..122513992,+ | ||
|ontology_enrichment_celltype=CL:0002194!3.52e-24!63;CL:0000576!3.52e-24!63;CL:0000040!3.52e-24!63;CL:0000559!3.52e-24!63;CL:0000860!5.54e-24!45;CL:0002057!1.42e-23!42;CL:0002009!2.57e-23!65;CL:0000766!1.43e-21!76;CL:0000557!1.05e-18!71;CL:0000839!7.33e-17!70;CL:0002251!8.44e-07!21;CL:0000223!8.83e-07!59 | |ontology_enrichment_celltype=CL:0002194!3.52e-24!63;CL:0000576!3.52e-24!63;CL:0000040!3.52e-24!63;CL:0000559!3.52e-24!63;CL:0000860!5.54e-24!45;CL:0002057!1.42e-23!42;CL:0002009!2.57e-23!65;CL:0000766!1.43e-21!76;CL:0000557!1.05e-18!71;CL:0000839!7.33e-17!70;CL:0002251!8.44e-07!21;CL:0000223!8.83e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.76e-18;39!CL:0000234;8.76e-18;39!CL:0000860;9.08e-18;33!CL:0002057;9.08e-18;33!CL:0000576;2.18e-14;48!CL:0000766;1.24e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.77e-27,48;CL:0000234,4.77e-27,48;CL:0002194,7.30e-24,59;CL:0000576,7.30e-24,59;CL:0000040,7.30e-24,59;CL:0000559,7.30e-24,59;CL:0000860,1.42e-23,42;CL:0002057,1.42e-23,42;CL:0002009,5.83e-23,61;CL:0000766,4.16e-21,72;CL:0000557,3.14e-18,67;CL:0000839,2.31e-16,66 | |||
|ontology_enrichment_development_v019=CL:0002057;3.44e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.94e-19!511;UBERON:0000468!5.67e-18!659;UBERON:0000467!1.04e-16!625;UBERON:0002050!2.28e-16!605;UBERON:0005423!2.28e-16!605;UBERON:0000480!2.57e-16!626;UBERON:0000923!2.74e-16!604;UBERON:0005291!2.74e-16!604;UBERON:0006598!2.74e-16!604;UBERON:0002532!2.74e-16!604;UBERON:0000922!5.98e-16!612;UBERON:0002371!6.15e-14!80;UBERON:0001474!1.47e-12!86;UBERON:0002390!1.98e-12!102;UBERON:0003061!1.98e-12!102;UBERON:0004765!9.17e-12!101;UBERON:0001434!9.17e-12!101;UBERON:0002193!6.27e-11!112;UBERON:0002405!1.15e-09!115;UBERON:0007023!7.43e-07!115 | |ontology_enrichment_uberon=UBERON:0000062!6.94e-19!511;UBERON:0000468!5.67e-18!659;UBERON:0000467!1.04e-16!625;UBERON:0002050!2.28e-16!605;UBERON:0005423!2.28e-16!605;UBERON:0000480!2.57e-16!626;UBERON:0000923!2.74e-16!604;UBERON:0005291!2.74e-16!604;UBERON:0006598!2.74e-16!604;UBERON:0002532!2.74e-16!604;UBERON:0000922!5.98e-16!612;UBERON:0002371!6.15e-14!80;UBERON:0001474!1.47e-12!86;UBERON:0002390!1.98e-12!102;UBERON:0003061!1.98e-12!102;UBERON:0004765!9.17e-12!101;UBERON:0001434!9.17e-12!101;UBERON:0002193!6.27e-11!112;UBERON:0002405!1.15e-09!115;UBERON:0007023!7.43e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.27e-15,564;UBERON:0005423,1.00e-14,581;UBERON:0000923,1.35e-14,560;UBERON:0010316,1.35e-14,560;UBERON:0005291,1.35e-14,560;UBERON:0006598,1.35e-14,560;UBERON:0010317,1.35e-14,560;UBERON:0002532,1.35e-14,560;UBERON:0000922,1.16e-13,592;UBERON:0002371,2.11e-13,76;UBERON:0004765,4.07e-13,90;UBERON:0001474,5.08e-12,82;UBERON:0002390,6.98e-12,98;UBERON:0003061,6.98e-12,98;UBERON:0001434,3.24e-11,100;UBERON:0002193,2.13e-10,108;UBERON:0002405,3.09e-09,93;UBERON:0007023,6.17e-07,114 | |||
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| ||
|short_description=p1@DIRC2 | |short_description=p1@DIRC2 | ||
}} | }} |
Latest revision as of 00:28, 20 September 2015
Short description: | p1@DIRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DIRC2_5end |
Coexpression cluster: | C2707_Neutrophils_Eosinophils_CD14_Mesenchymal_blood_Whole_heart |
Association with transcript: | 0bp_to_ENST00000477647, NM_032839, uc003efw.3, uc010hrl.2, uc010hrm.2_5end |
EntrezGene: | DIRC2 |
HGNC: | 16628 |
UniProt: | Q05BS2Q96SL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.77e-27 | 48 |
phagocyte | 4.77e-27 | 48 |
monopoietic cell | 7.30e-24 | 59 |
monocyte | 7.30e-24 | 59 |
monoblast | 7.30e-24 | 59 |
promonocyte | 7.30e-24 | 59 |
classical monocyte | 1.42e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-23 | 42 |
macrophage dendritic cell progenitor | 5.83e-23 | 61 |
myeloid leukocyte | 4.16e-21 | 72 |
granulocyte monocyte progenitor cell | 3.14e-18 | 67 |
myeloid lineage restricted progenitor cell | 2.31e-16 | 66 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 1.27e-15 | 564 |
developing anatomical structure | 1.00e-14 | 581 |
germ layer | 1.35e-14 | 560 |
germ layer / neural crest | 1.35e-14 | 560 |
embryonic tissue | 1.35e-14 | 560 |
presumptive structure | 1.35e-14 | 560 |
germ layer / neural crest derived structure | 1.35e-14 | 560 |
epiblast (generic) | 1.35e-14 | 560 |
embryo | 1.16e-13 | 592 |
bone marrow | 2.11e-13 | 76 |
skeletal element | 4.07e-13 | 90 |
bone element | 5.08e-12 | 82 |
hematopoietic system | 6.98e-12 | 98 |
blood island | 6.98e-12 | 98 |
skeletal system | 3.24e-11 | 100 |
hemolymphoid system | 2.13e-10 | 108 |
immune system | 3.09e-09 | 93 |
adult organism | 6.17e-07 | 114 |