FFCP PHASE1:Hg19::chr9:110250651..110250662,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:110250651..110250662,- to FFCP PHASE1:Hg19::chr9:110250651..110250662,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9314 | |EntrezGene=9314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6348 | |HGNC=6348 | ||
|TSSclassifier=strong | |||
|UniProt=O43474 | |UniProt=O43474 | ||
|association_with_transcript=65bp_to_ENST00000497048,uc004bdf.1_5end | |||
|cluster_id=chr9:110250651..110250662,- | |||
|coexpression_cluster_id=C475 | |||
|description=CAGE_peak_11_at_KLF4_5end | |||
|id=chr9:110250651..110250662,- | |||
|ontology_enrichment_celltype=CL:0002057!4.58e-42!42;CL:0000860!2.41e-38!45;CL:0000766!4.82e-28!76;CL:0002009!6.78e-28!65;CL:0000557!2.97e-27!71;CL:0002194!6.83e-26!63;CL:0000576!6.83e-26!63;CL:0000040!6.83e-26!63;CL:0000559!6.83e-26!63;CL:0000839!9.37e-25!70;CL:0000738!1.35e-17!140;CL:0000763!2.45e-16!112;CL:0000049!2.45e-16!112;CL:0002393!2.03e-14!9;CL:0002397!2.03e-14!9;CL:0002087!2.58e-14!119;CL:0002031!1.17e-13!124;CL:0000037!2.48e-11!172;CL:0000566!2.48e-11!172;CL:0000988!6.88e-10!182;CL:0002032!1.37e-09!165;CL:0000837!1.37e-09!165;CL:0000134!4.35e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.85e-45;6!CL:0002397;2.85e-45;6!CL:0000576;5.14e-37;48!CL:0000860;4.45e-31;33!CL:0002057;4.45e-31;33!CL:0000766;1.90e-25;69!CL:0000226;1.21e-23;3!CL:0000842;1.21e-23;3!CL:0000473;1.76e-22;39!CL:0000234;1.76e-22;39!CL:0000767;1.14e-11;3!CL:0000094;2.04e-09;8!CL:0002087;4.68e-08;104!CL:0000081;5.70e-07;11!CL:0000763;8.67e-07;100!CL:0000988;9.42e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.60e-62,42;CL:0002057,1.60e-62,42;CL:0000473,2.66e-54,48;CL:0000234,2.66e-54,48;CL:0000766,2.72e-47,72;CL:0002194,8.72e-43,59;CL:0000576,8.72e-43,59;CL:0000040,8.72e-43,59;CL:0000559,8.72e-43,59;CL:0002009,2.67e-41,61;CL:0002393,5.58e-41,9;CL:0002397,5.58e-41,9;CL:0000839,5.71e-38,66;CL:0000557,2.31e-37,67;CL:0000738,3.27e-31,136;CL:0000763,1.82e-30,108;CL:0000049,1.82e-30,108;CL:0002087,2.66e-28,115;CL:0000037,1.45e-24,168;CL:0000226,1.47e-23,3;CL:0000842,1.47e-23,3;CL:0000988,4.00e-23,177;CL:0002031,1.63e-19,120;CL:0002032,2.86e-19,161;CL:0000837,2.86e-19,161;CL:0000767,1.15e-11,3;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000094,2.20e-09,8;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441;CL:0000081,6.00e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-42;42!CL:0000049;4.68e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.31e-22!80;UBERON:0001474!4.29e-21!86;UBERON:0004765!5.33e-19!101;UBERON:0001434!5.33e-19!101;UBERON:0002390!3.18e-18!102;UBERON:0003061!3.18e-18!102;UBERON:0002193!3.10e-17!112;UBERON:0002405!2.25e-13!115;UBERON:0002204!1.55e-09!167;UBERON:0000062!2.76e-08!511;UBERON:0003081!2.85e-07!216;UBERON:0000926!6.69e-07!448;UBERON:0004120!6.69e-07!448;UBERON:0006603!6.69e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.53e-34,98;UBERON:0003061,8.53e-34,98;UBERON:0002371,1.32e-32,76;UBERON:0002193,2.34e-30,108;UBERON:0001474,5.26e-30,82;UBERON:0004765,4.52e-27,90;UBERON:0002405,4.24e-26,93;UBERON:0001434,4.70e-24,100;UBERON:0003081,1.86e-14,203;UBERON:0002204,4.37e-13,167;UBERON:0002384,5.43e-10,371;UBERON:0000926,5.72e-09,315;UBERON:0004120,5.72e-09,315;UBERON:0006603,5.72e-09,315 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,2.00146596706261,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.383829398097213,3.2511385896376,0,0,0,0,0,0,1.66198622559563,3.81034450193269,1.73608696572681,0,0,0,0.581592955118259,0.755751887377619,1.69808842831471,0.929716147622738,2.05583944010913,1.54853185447552,1.1507695692886,0.512321413058201,1.6553756092201,0.344745680736619,3.22742341791913,0,0.752969358170419,0.818718450173537,0.224723484445085,0.612167784741805,0,0,0.989553900560148,2.59302754908121,1.27867425159808,0.290209238628584,0.56738522469114,0.622822248995575,1.25624332628372,0,0.868755378820466,0,0.736555271975129,0,1.69004229049553,1.70083439972035,1.04829322754188,3.25753030324836,2.55300717830561,1.76798145366788,1.99508920618874,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.24060815673732,1.72571360654893,2.02782359826544,0.606255142892519,0,0.30239029332968,0.744323423456331,0.306923946576125,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.308696632431779,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0.26940821205835,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0.422863212287913,2.00146596706261,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.383829398097213,3.2511385896376,0,0,0,0,0,0,1.66198622559563,3.81034450193269,1.73608696572681,0,0,0,0.581592955118259,0.755751887377619,1.69808842831471,0.929716147622738,2.05583944010913,1.54853185447552,1.1507695692886,0.512321413058201,1.6553756092201,0.344745680736619,3.22742341791913,0,0.752969358170419,0.818718450173537,0.224723484445085,0.612167784741805,0,0,0.989553900560148,2.59302754908121,1.27867425159808,0.290209238628584,0.56738522469114,0.622822248995575,1.25624332628372,0,0.868755378820466,0,0.736555271975129,0,1.69004229049553,1.70083439972035,1.04829322754188,3.25753030324836,2.55300717830561,1.76798145366788,1.99508920618874,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.24060815673732,1.72571360654893,2.02782359826544,0.606255142892519,0,0.30239029332968,0.744323423456331,0.306923946576125,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.308696632431779,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0.26940821205835,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p11@KLF4 | |||
}} | }} |
Latest revision as of 01:02, 20 September 2015
Short description: | p11@KLF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_KLF4_5end |
Coexpression cluster: | C475_CD14_Basophils_CD14CD16_Peripheral_CD133_large_immature |
Association with transcript: | 65bp_to_ENST00000497048, uc004bdf.1_5end |
EntrezGene: | KLF4 |
HGNC: | 6348 |
UniProt: | O43474 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.53e-34 | 98 |
blood island | 8.53e-34 | 98 |
bone marrow | 1.32e-32 | 76 |
hemolymphoid system | 2.34e-30 | 108 |
bone element | 5.26e-30 | 82 |
skeletal element | 4.52e-27 | 90 |
immune system | 4.24e-26 | 93 |
skeletal system | 4.70e-24 | 100 |
lateral plate mesoderm | 1.86e-14 | 203 |
musculoskeletal system | 4.37e-13 | 167 |
connective tissue | 5.43e-10 | 371 |
mesoderm | 5.72e-09 | 315 |
mesoderm-derived structure | 5.72e-09 | 315 |
presumptive mesoderm | 5.72e-09 | 315 |