FFCP PHASE1:Hg19::chr15:96874216..96874236,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:96874216..96874236,+
|short_description=p13@NR2F2
|description=CAGE_peak_13_at_NR2F2_5end
|association_with_transcript=105bp_to_NM_021005,uc010uri.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7026 | |EntrezGene=7026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7976 | |HGNC=7976 | ||
|TSSclassifier=strong | |||
|UniProt=F1D8R0,P24468 | |UniProt=F1D8R0,P24468 | ||
|association_with_transcript=105bp_to_NM_021005,uc010uri.1_5end | |||
|cluster_id=chr15:96874216..96874236,+ | |||
|coexpression_cluster_id=C2357 | |||
|description=CAGE_peak_13_at_NR2F2_5end | |||
|id=chr15:96874216..96874236,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.01e-17!119;CL:0000183!2.15e-11!59;CL:0000220!2.31e-09!246;CL:0000680!3.12e-09!57;CL:0000056!3.12e-09!57;CL:0000355!3.12e-09!57;CL:0000187!3.51e-09!54;CL:0002321!7.06e-09!248;CL:0000192!1.60e-08!42;CL:0000514!1.60e-08!42;CL:0000055!1.70e-08!180;CL:0002139!2.84e-08!24;CL:0002078!3.64e-08!44;CL:0000213!5.78e-08!57;CL:0000215!5.78e-08!57;CL:0000115!9.17e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.10e-09;24!CL:0000115;3.24e-08;36!CL:0000192;5.05e-08;43!CL:0000359;4.90e-07;32!CL:0000071;8.34e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.54e-18,121;CL:0000192,1.02e-10,43;CL:0000514,1.02e-10,43;CL:0000115,3.24e-10,36;CL:0002139,3.92e-10,24;CL:0000187,7.63e-10,55;CL:0002078,2.30e-09,45;CL:0000680,2.34e-09,58;CL:0000056,2.34e-09,58;CL:0000355,2.34e-09,58;CL:0000213,1.11e-08,58;CL:0000215,1.11e-08,58;CL:0000393,1.04e-07,61;CL:0000211,1.04e-07,61;CL:0000359,1.79e-07,32;CL:0000071,3.37e-07,18;CL:0002546,3.37e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;5.05e-08;43!CL:0002546;8.34e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.84e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.67e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002100!1.32e-19!216;UBERON:0002049!6.58e-17!79;UBERON:0007798!6.58e-17!79;UBERON:0003914!1.22e-15!118;UBERON:0000490!4.70e-14!138;UBERON:0003104!4.76e-14!238;UBERON:0009142!4.76e-14!238;UBERON:0000055!5.01e-14!69;UBERON:0000119!2.89e-13!312;UBERON:0000481!3.10e-13!347;UBERON:0000477!1.48e-12!286;UBERON:0000483!1.67e-12!309;UBERON:0005256!3.09e-12!143;UBERON:0009569!3.14e-12!113;UBERON:0000475!6.97e-12!365;UBERON:0004111!8.87e-12!241;UBERON:0001981!1.93e-11!60;UBERON:0007500!1.93e-11!60;UBERON:0004537!1.93e-11!60;UBERON:0006965!1.93e-11!60;UBERON:0004872!5.84e-11!84;UBERON:0004535!5.03e-10!110;UBERON:0000466!7.72e-10!126;UBERON:0001009!8.22e-10!113;UBERON:0000464!4.03e-09!104;UBERON:0001134!5.09e-09!61;UBERON:0002036!5.09e-09!61;UBERON:0003082!5.09e-09!61;UBERON:0003886!5.15e-09!63;UBERON:0002385!7.45e-09!63;UBERON:0001015!7.45e-09!63;UBERON:0000383!7.45e-09!63;UBERON:0002417!1.24e-08!61;UBERON:0000916!1.24e-08!61;UBERON:0000025!1.30e-08!194;UBERON:0000468!1.47e-08!659;UBERON:0002553!2.99e-08!70;UBERON:0004290!1.31e-07!70;UBERON:0006554!1.95e-07!44;UBERON:0001008!2.25e-07!45;UBERON:0005177!2.57e-07!107;UBERON:0001637!3.42e-07!42;UBERON:0003509!3.42e-07!42;UBERON:0004572!3.42e-07!42;UBERON:0000486!5.64e-07!82;UBERON:0003103!6.20e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;5.17e-08;65!UBERON:0007500;8.93e-08;56!UBERON:0001981;8.93e-08;56!UBERON:0004537;8.93e-08;56!UBERON:0002049;1.51e-07;75!UBERON:0007798;1.51e-07;75!UBERON:0004573;1.99e-07;33!UBERON:0004571;1.99e-07;33!UBERON:0000947;4.95e-07;21!UBERON:0010191;4.95e-07;21!UBERON:0003914;6.09e-07;74!UBERON:0004638;8.34e-07;18!UBERON:0001986;8.34e-07;18!UBERON:0004852;8.34e-07;18 | |||
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| ||
|short_description=p13@NR2F2 | |||
}} | }} |
Latest revision as of 01:22, 20 September 2015
Short description: | p13@NR2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NR2F2_5end |
Coexpression cluster: | C2357_extraskeletal_small_Pericytes_alveolar_epithelioid_Fibroblast_Mesenchymal |
Association with transcript: | 105bp_to_NM_021005, uc010uri.1_5end |
EntrezGene: | NR2F2 |
HGNC: | 7976 |
UniProt: | F1D8R0P24468 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.54e-18 | 121 |
smooth muscle cell | 1.02e-10 | 43 |
smooth muscle myoblast | 1.02e-10 | 43 |
endothelial cell | 3.24e-10 | 36 |
endothelial cell of vascular tree | 3.92e-10 | 24 |
muscle cell | 7.63e-10 | 55 |
meso-epithelial cell | 2.30e-09 | 45 |
muscle precursor cell | 2.34e-09 | 58 |
myoblast | 2.34e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-09 | 58 |
lining cell | 1.11e-08 | 58 |
barrier cell | 1.11e-08 | 58 |
electrically responsive cell | 1.04e-07 | 61 |
electrically active cell | 1.04e-07 | 61 |
vascular associated smooth muscle cell | 1.79e-07 | 32 |
blood vessel endothelial cell | 3.37e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.37e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.67e-07 | 14 |