FFCP PHASE1:Hg19::chr14:50360664..50360751,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=382 | |EntrezGene=382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=659 | |HGNC=659 | ||
|TSSclassifier=strong | |||
|UniProt=P62330,Q5U025,Q6FH17,Q6FGZ2 | |UniProt=P62330,Q5U025,Q6FH17,Q6FGZ2 | ||
|association_with_transcript=209bp_to_AF493885,BT019868,CR541939,CR541964_5end | |association_with_transcript=209bp_to_AF493885,BT019868,CR541939,CR541964_5end | ||
|cluster_id=chr14:50360664..50360751,+ | |||
|description=CAGE_peak_7_at_ARF6_5end | |description=CAGE_peak_7_at_ARF6_5end | ||
|id=chr14:50360664..50360751,+ | |id=chr14:50360664..50360751,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.27e-22!140;CL:0002057!3.03e-21!42;CL:0002031!7.14e-20!124;CL:0000860!1.37e-19!45;CL:0000766!5.40e-19!76;CL:0000839!2.56e-18!70;CL:0002009!4.01e-18!65;CL:0002087!5.13e-18!119;CL:0000557!5.55e-18!71;CL:0002194!5.18e-17!63;CL:0000576!5.18e-17!63;CL:0000040!5.18e-17!63;CL:0000559!5.18e-17!63;CL:0002032!3.61e-16!165;CL:0000837!3.61e-16!165;CL:0000988!3.63e-16!182;CL:0000037!3.87e-16!172;CL:0000566!3.87e-16!172;CL:0000763!4.42e-14!112;CL:0000049!4.42e-14!112;CL:0002320!2.34e-10!365;CL:0000134!4.26e-10!358;CL:0000048!8.22e-08!430;CL:0000723!8.65e-08!436;CL:0000034!1.25e-07!444;CL:0000219!7.25e-07!390 | |ontology_enrichment_celltype=CL:0000738!3.27e-22!140;CL:0002057!3.03e-21!42;CL:0002031!7.14e-20!124;CL:0000860!1.37e-19!45;CL:0000766!5.40e-19!76;CL:0000839!2.56e-18!70;CL:0002009!4.01e-18!65;CL:0002087!5.13e-18!119;CL:0000557!5.55e-18!71;CL:0002194!5.18e-17!63;CL:0000576!5.18e-17!63;CL:0000040!5.18e-17!63;CL:0000559!5.18e-17!63;CL:0002032!3.61e-16!165;CL:0000837!3.61e-16!165;CL:0000988!3.63e-16!182;CL:0000037!3.87e-16!172;CL:0000566!3.87e-16!172;CL:0000763!4.42e-14!112;CL:0000049!4.42e-14!112;CL:0002320!2.34e-10!365;CL:0000134!4.26e-10!358;CL:0000048!8.22e-08!430;CL:0000723!8.65e-08!436;CL:0000034!1.25e-07!444;CL:0000219!7.25e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.80e-26;33!CL:0002057;2.80e-26;33!CL:0000473;1.10e-20;39!CL:0000234;1.10e-20;39!CL:0000576;1.68e-15;48!CL:0000766;8.65e-12;69!CL:0000738;2.45e-07;136!CL:0002087;3.97e-07;104!CL:0000453;8.10e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.52e-29,42;CL:0002057,1.52e-29,42;CL:0000473,9.65e-29,48;CL:0000234,9.65e-29,48;CL:0000738,9.59e-28,136;CL:0002031,3.63e-23,120;CL:0000766,5.26e-23,72;CL:0002009,9.68e-23,61;CL:0000557,5.12e-22,67;CL:0000839,8.58e-22,66;CL:0002087,9.73e-22,115;CL:0000037,1.34e-21,168;CL:0002194,5.26e-21,59;CL:0000576,5.26e-21,59;CL:0000040,5.26e-21,59;CL:0000559,5.26e-21,59;CL:0000988,6.06e-21,177;CL:0002032,1.09e-20,161;CL:0000837,1.09e-20,161;CL:0000763,1.04e-18,108;CL:0000049,1.04e-18,108;CL:0000134,5.35e-12,354;CL:0002320,7.95e-12,361;CL:0000048,3.49e-10,427;CL:0000723,7.02e-10,433;CL:0000034,7.78e-10,441;CL:0000219,1.77e-08,386;CL:0000453,7.49e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.25e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.70e-16!102;UBERON:0003061!5.70e-16!102;UBERON:0002371!1.06e-15!80;UBERON:0002193!1.94e-14!112;UBERON:0001474!8.12e-14!86;UBERON:0004765!2.25e-12!101;UBERON:0001434!2.25e-12!101;UBERON:0002405!7.29e-12!115;UBERON:0002384!5.51e-10!375;UBERON:0002204!5.28e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!5.70e-16!102;UBERON:0003061!5.70e-16!102;UBERON:0002371!1.06e-15!80;UBERON:0002193!1.94e-14!112;UBERON:0001474!8.12e-14!86;UBERON:0004765!2.25e-12!101;UBERON:0001434!2.25e-12!101;UBERON:0002405!7.29e-12!115;UBERON:0002384!5.51e-10!375;UBERON:0002204!5.28e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-19,76;UBERON:0001474,5.75e-17,82;UBERON:0002390,9.60e-17,98;UBERON:0003061,9.60e-17,98;UBERON:0004765,1.05e-14,90;UBERON:0002405,1.85e-14,93;UBERON:0002193,2.72e-14,108;UBERON:0001434,1.24e-13,100;UBERON:0002384,1.78e-11,371;UBERON:0002204,3.70e-08,167 | |||
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| ||
|short_description=p7@ARF6 | |short_description=p7@ARF6 | ||
}} | }} |
Latest revision as of 02:43, 20 September 2015
Short description: | p7@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 209bp_to_AF493885, BT019868, CR541939, CR541964_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | P62330Q5U025Q6FH17Q6FGZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.52e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-29 | 42 |
defensive cell | 9.65e-29 | 48 |
phagocyte | 9.65e-29 | 48 |
leukocyte | 9.59e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 3.63e-23 | 120 |
myeloid leukocyte | 5.26e-23 | 72 |
macrophage dendritic cell progenitor | 9.68e-23 | 61 |
granulocyte monocyte progenitor cell | 5.12e-22 | 67 |
myeloid lineage restricted progenitor cell | 8.58e-22 | 66 |
nongranular leukocyte | 9.73e-22 | 115 |
hematopoietic stem cell | 1.34e-21 | 168 |
monopoietic cell | 5.26e-21 | 59 |
monocyte | 5.26e-21 | 59 |
monoblast | 5.26e-21 | 59 |
promonocyte | 5.26e-21 | 59 |
hematopoietic cell | 6.06e-21 | 177 |
hematopoietic oligopotent progenitor cell | 1.09e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-20 | 161 |
myeloid cell | 1.04e-18 | 108 |
common myeloid progenitor | 1.04e-18 | 108 |
mesenchymal cell | 5.35e-12 | 354 |
connective tissue cell | 7.95e-12 | 361 |
multi fate stem cell | 3.49e-10 | 427 |
somatic stem cell | 7.02e-10 | 433 |
stem cell | 7.78e-10 | 441 |
motile cell | 1.77e-08 | 386 |
Langerhans cell | 7.49e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-19 | 76 |
bone element | 5.75e-17 | 82 |
hematopoietic system | 9.60e-17 | 98 |
blood island | 9.60e-17 | 98 |
skeletal element | 1.05e-14 | 90 |
immune system | 1.85e-14 | 93 |
hemolymphoid system | 2.72e-14 | 108 |
skeletal system | 1.24e-13 | 100 |
connective tissue | 1.78e-11 | 371 |
musculoskeletal system | 3.70e-08 | 167 |