FFCP PHASE1:Hg19::chr18:60986647..60986662,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:60986647..60986662,- to FFCP PHASE1:Hg19::chr18:60986647..60986662,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=596 | |EntrezGene=596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=990 | |HGNC=990 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002liu.1_5end | |||
|cluster_id=chr18:60986647..60986662,- | |||
|description=CAGE_peak_4_at_BCL2_5end | |||
|id=chr18:60986647..60986662,- | |||
|ontology_enrichment_celltype=CL:0000037!4.30e-26!172;CL:0000566!4.30e-26!172;CL:0000542!1.66e-24!53;CL:0000051!1.66e-24!53;CL:0000988!2.01e-24!182;CL:0002032!2.03e-24!165;CL:0000837!2.03e-24!165;CL:0000838!9.31e-24!52;CL:0002087!1.14e-21!119;CL:0000738!9.47e-21!140;CL:0002031!2.47e-20!124;CL:0000084!2.74e-13!25;CL:0000827!2.74e-13!25;CL:0000791!2.40e-10!18;CL:0000789!2.40e-10!18;CL:0002420!2.40e-10!18;CL:0002419!2.40e-10!18;CL:0000790!2.40e-10!18;CL:0000945!3.00e-10!24;CL:0000826!3.00e-10!24;CL:0000236!1.76e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.53e-19;53!CL:0000084;3.55e-17;25!CL:0000791;4.57e-15;18!CL:0000789;4.57e-15;18!CL:0002419;4.57e-15;18!CL:0000945;1.41e-13;24!CL:0002087;3.31e-10;104!CL:0000236;4.00e-10;13!CL:0000625;1.13e-08;11!CL:0000624;6.21e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.66e-34,53;CL:0000051,9.66e-34,53;CL:0000988,2.73e-33,177;CL:0000037,3.19e-33,168;CL:0000838,1.36e-32,52;CL:0002032,5.68e-31,161;CL:0000837,5.68e-31,161;CL:0002087,8.42e-26,115;CL:0000738,6.21e-24,136;CL:0002031,9.66e-24,120;CL:0000084,1.53e-17,25;CL:0000827,1.53e-17,25;CL:0000791,2.47e-15,18;CL:0000789,2.47e-15,18;CL:0002420,2.47e-15,18;CL:0002419,2.47e-15,18;CL:0000790,2.47e-15,18;CL:0000945,7.82e-14,24;CL:0000826,7.82e-14,24;CL:0000236,2.29e-11,14;CL:0000625,5.64e-09,11;CL:0000763,6.15e-07,108;CL:0000049,6.15e-07,108;CL:0000624,7.08e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;2.53e-19;53!CL:0000790;4.57e-15;18 | |||
|ontology_enrichment_disease=DOID:2531!3.77e-12!51;DOID:0060083!3.77e-12!51;DOID:1240!4.93e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.25e-10;39!DOID:2531;5.09e-10;51!DOID:0060083;5.09e-10;51!DOID:8692;1.73e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.83e-16,51;DOID:0060083,2.83e-16,51;DOID:1240,3.29e-14,39;DOID:8692,1.56e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.71e-09!115;UBERON:0002390!4.79e-07!102;UBERON:0003061!4.79e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,1.52826811495903,1.39571002064908,0.865818594450472,4.32700704533794,0,0.464448369948228,0,0,0,0,3.83856927716038,1.17440175733939,0.553995408531877,2.60707781711184,1.95309783644267,0.223915474239924,0.32389366601898,0.257575567634187,0.436194716338694,0.377875943688809,0,0.232429036905685,3.28934310417461,2.47765096716083,1.1507695692886,1.2808035326455,0.236482229888585,1.72372840368309,3.22742341791913,2.70852973188684,0.188242339542605,1.09162460023138,0.898893937780338,1.53041946185451,1.60464513538047,3.83602275479425,1.64925650093358,0.398927315243264,0.426224750532694,2.32167390902867,1.13477044938228,1.86846674698672,0.75374599577023,1.5644487552606,0.434377689410233,0,1.10483290796269,1.26584954976354,0.422510572623884,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,4.36910889009705,4.44754626931777,6.40095333849761,1.60158394814405,3.4485146397269,1.98313461835459,8.58648379081828,9.67662047486062,5.28513470433845,9.93910393125595,0,0.560508562981536,1.05353633910031,5.11445402295966,10.6112905942274,8.63526295797939,3.00935691703221,2.93330039970231,3.78758244587787,1.94826728407911,1.00269411196656,2.06224135232386,1.32920336750173,0.270803863765016,6.78883994546078,6.76308607311367,7.89301942097645,8.0141505157896,2.31842468588042,2.37258501059297,1.87278579662799,4.18142095219907,1.35971211237079,2.29932296161153,2.06176467289578,1.77113784413652,1.59282707162048,4.55758417699493,5.70271226669025,1.20460095262218,1.91979916731628,1.24930726552346,2.36777252044017,1.64225599384209,3.62892137804518,1.87208137048455,7.09639579025715,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.327447688744282,0,0.370784442784429,0,0.174129737299267,0.26591592103773,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,4.85609409356116,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.44024217006613,1.86595303986695,10.2325166926043,7.06957627187728,0.444485260045183,0,0,0,0.205654985406647,0.901029173531752,0.571652865261156,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0,0,0,17.9336230389644,3.34952292343276,2.15627574859517,3.20857590699371,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.6541442089831,4.52999821719095,1.60091336705167,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,1.54561517471583,0.27470839445503,0,0,0,0,0,0.462145851343933,0.460511024178389,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0.764637207142375,2.27858874869665,1.90585420366231,0,1.29694662238543,3.24018862342869,0,0.534120355637366,2.88743956579008,0,45.1501715555496,1.73123055571734,1.77854608371035,0.956557636372934,1.99579371432817,1.1490322207942,8.6786168916792,3.24621940274555,5.33514638415572,18.2587743226554,0.94007937463814,10.0253790836027,1.18504244461122,4.17528995269619,3.43059502224781,2.98092366383228,4.12206413706918,1.53620382154229,1.56573275524691,0.333698283423817,0.390776190804081,0,2.46174797895425,0,6.32836739195858,0,0.37428108081644,0.73254089635947,0,8.02392366797844,1.13654458722565,0,0,1.22864280839693,0.994147647766298,0.562677665642051,1.22439575525196,0.494411622680279,6.96713846822378,1.39473591775749,7.73594963487214,0,0.20453736500431,6.89274910581989,0,0,0,15.858743477033,0.690503839458535,0,0,0,0.556608588971108,1.99613798001194,4.42727193844896,0,2.17499872630438,0.1137934482855,0,0.236387681767936,11.3765313169683,2.33283690706603,0.173624994933292,4.42870692906919,0.361789315876224,0,0.331737779793674,0,0.87754158861589,0.21787692703798,1.39423744278603,1.46205491157214,0.113942055847001,0.23056390438806,0.269272933229316,0,0,0,0.533034776018635,4.08773192782946,2.35470384592537,2.16075186470203,0,0,0,1.13852239634511,0,1.8989825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| 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| ||
|short_description=p4@BCL2 | |||
}} | }} |
Latest revision as of 03:32, 20 September 2015
Short description: | p4@BCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002liu.1_5end |
EntrezGene: | BCL2 |
HGNC: | 990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.66e-34 | 53 |
common lymphoid progenitor | 9.66e-34 | 53 |
hematopoietic cell | 2.73e-33 | 177 |
hematopoietic stem cell | 3.19e-33 | 168 |
lymphoid lineage restricted progenitor cell | 1.36e-32 | 52 |
hematopoietic oligopotent progenitor cell | 5.68e-31 | 161 |
hematopoietic multipotent progenitor cell | 5.68e-31 | 161 |
nongranular leukocyte | 8.42e-26 | 115 |
leukocyte | 6.21e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 9.66e-24 | 120 |
T cell | 1.53e-17 | 25 |
pro-T cell | 1.53e-17 | 25 |
mature alpha-beta T cell | 2.47e-15 | 18 |
alpha-beta T cell | 2.47e-15 | 18 |
immature T cell | 2.47e-15 | 18 |
mature T cell | 2.47e-15 | 18 |
immature alpha-beta T cell | 2.47e-15 | 18 |
lymphocyte of B lineage | 7.82e-14 | 24 |
pro-B cell | 7.82e-14 | 24 |
B cell | 2.29e-11 | 14 |
CD8-positive, alpha-beta T cell | 5.64e-09 | 11 |
myeloid cell | 6.15e-07 | 108 |
common myeloid progenitor | 6.15e-07 | 108 |
CD4-positive, alpha-beta T cell | 7.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.83e-16 | 51 |
immune system cancer | 2.83e-16 | 51 |
leukemia | 3.29e-14 | 39 |
myeloid leukemia | 1.56e-09 | 31 |