FFCP PHASE1:Hg19::chr22:37545972..37545989,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:37545972..37545989,- to FFCP PHASE1:Hg19::chr22:37545972..37545989,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3560 | |EntrezGene=3560 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6009 | |HGNC=6009 | ||
|TSSclassifier=strong | |||
|UniProt=P14784 | |UniProt=P14784 | ||
|association_with_transcript=-10bp_to_NM_000878,uc003aqv.1_5end | |||
|cluster_id=chr22:37545972..37545989,- | |||
|coexpression_cluster_id=C2644 | |||
|description=CAGE_peak_2_at_IL2RB_5end | |||
|id=chr22:37545972..37545989,- | |||
|ontology_enrichment_celltype=CL:0000838!2.13e-28!52;CL:0000542!1.72e-27!53;CL:0000051!1.72e-27!53;CL:0000738!6.62e-26!140;CL:0000988!5.89e-23!182;CL:0002087!1.38e-22!119;CL:0000037!1.41e-22!172;CL:0000566!1.41e-22!172;CL:0002032!3.22e-21!165;CL:0000837!3.22e-21!165;CL:0002031!9.95e-21!124;CL:0000084!2.31e-20!25;CL:0000827!2.31e-20!25;CL:0000791!1.57e-16!18;CL:0000789!1.57e-16!18;CL:0002420!1.57e-16!18;CL:0002419!1.57e-16!18;CL:0000790!1.57e-16!18;CL:0000625!1.05e-10!11;CL:0000945!6.58e-08!24;CL:0000826!6.58e-08!24;CL:0000080!4.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.10e-37;25!CL:0000791;1.12e-31;18!CL:0000789;1.12e-31;18!CL:0002419;1.12e-31;18!CL:0000542;2.74e-20;53!CL:0000625;6.19e-20;11!CL:0000624;1.60e-11;6!CL:0002087;6.26e-10;104!CL:0000623;1.62e-07;3!CL:0000767;5.61e-07;3!CL:0000226;9.74e-07;3!CL:0000842;9.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.53e-41,52;CL:0000542,1.56e-40,53;CL:0000051,1.56e-40,53;CL:0000084,3.91e-37,25;CL:0000827,3.91e-37,25;CL:0000791,9.68e-32,18;CL:0000789,9.68e-32,18;CL:0002420,9.68e-32,18;CL:0002419,9.68e-32,18;CL:0000790,9.68e-32,18;CL:0002087,1.16e-24,115;CL:0000738,1.25e-24,136;CL:0000988,2.09e-22,177;CL:0000037,8.08e-21,168;CL:0000625,5.76e-20,11;CL:0002031,2.61e-19,120;CL:0002032,3.88e-18,161;CL:0000837,3.88e-18,161;CL:0000624,1.46e-11,6;CL:0000623,1.65e-07,3;CL:0000825,1.65e-07,3;CL:0000767,5.84e-07,3;CL:0000226,9.94e-07,3;CL:0000842,9.94e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.12e-31;18!CL:0000051;2.74e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.40e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.48e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.50e-14!15;UBERON:0000179!5.50e-14!15;UBERON:0000463!5.50e-14!15;UBERON:0002390!2.02e-10!102;UBERON:0003061!2.02e-10!102;UBERON:0002193!2.56e-09!112;UBERON:0004177!9.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.38e-26;15!UBERON:0000179;1.38e-26;15!UBERON:0000463;1.38e-26;15!UBERON:0002390;1.51e-19;32!UBERON:0002193;8.32e-12;42!UBERON:0004177;9.13e-09;5!UBERON:0005057;9.13e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.36e-26,15;UBERON:0000179,1.36e-26,15;UBERON:0000463,1.36e-26,15;UBERON:0004177,5.09e-12,7;UBERON:0005057,5.09e-12,7;UBERON:0002390,1.30e-09,98;UBERON:0003061,1.30e-09,98;UBERON:0002193,1.54e-09,108;UBERON:0002370,1.08e-07,4;UBERON:0005058,1.08e-07,4;UBERON:0009113,1.08e-07,4;UBERON:0003295,1.08e-07,4;UBERON:0005562,1.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0,0.125542639594803,49.1338198959327,45.3195253763701,51.0832970725778,17.3080281813518,12.2825407391108,10.3726802621771,0,0,0,0.0774672005803016,0.284338464974843,0,6.64794490238253,6.21687787157439,5.859293509328,0.223915474239924,1.6194683300949,0.77272670290256,0,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0,0,1.53041946185451,0,0,1.64925650093358,0.199463657621632,0,0.290209238628584,1.70215567407342,0,0.502497330513487,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,1.68152568894461,0,7.86839080455332,9.82526906872912,12.3360899399706,18.7248874837559,7.82213439920617,12.7830907548378,19.4826728407911,24.0646586871975,12.9626599288928,13.9566353587681,16.2482318259009,29.8452774960823,36.9368547070054,13.1550323682941,16.8573510849367,11.012517257932,2.52087157375503,0.802622484269139,2.09071047609954,11.3309342697566,4.59864592322305,7.21617635513523,10.6268270648191,8.28270077242652,5.85975108470777,6.65316431113862,9.18508226374414,8.57510294734603,7.49584359314075,8.28720382154059,7.39015197228942,15.5237192283044,17.918493117495,11.4411279067411,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,3.97316789473185,0,0.686271241194102,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704387472105808,0.829312462163088,0.144119953416961,0.6312121671319,0,0,1.17217447210047,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0194092951327,38.2239674791739,30.4034880551919,30.4172995983004,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,10.1316332800215,10.138567438475,10.9929384537548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.564862804660675,0,0,0.443430153536676,0,5.58192370155386,4.58782324285425,6.83576624608995,5.00286728461357,5.75907182320672,4.53931317834902,6.48037724685738,7.9312517629427,0,0,0,0,0.144269212976445,1.20941133692304,0.956557636372934,3.79200805722352,0.383010740264733,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,1.11838053946208,0.333698283423817,0,1.39203086947621,0,0,1.33228787199128,0,0,0,0,25.63197838382,0,0.23874448473769,0,0,0,0,0,49.7707700164814,0,0.398495976502139,3.31540698637377,0,0,34.7099151400216,0,0,0,0,0.0986434056369336,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.638002319463839,0,0.533034776018635,0,1.2558420511602,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0.158936578980379,0,0,0,0,0.995261931078505,0.707660516026713,0,30.5416762541041,52.2675461743707,55.1347893388804,0,0.802577647298789,0,0,0,0,1.57833761139756,4.83962864194656,0,0.568679216656392,0.150323419414493,0.414752765588989,0,0,0.313932918407225,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.685209623233754,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,3.67193583490758,0,0,0,0,0,63.3558523813148,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,7.28190655765746,0,0.136203406111576,0.643012593860077,0.137539436597234,0.415440338029185,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,2.49286601344276,0.146552233678082,0,0,0,0,0,1.49502377594773,0.157204305099666,1.65695622138878,4.46549419630756,13.0423677052643,3.16660755790329,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0.303298235083296,0.856396000634902,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0.584580926518165,0.398594520940089,0.327130788511688,0,0,0,68.395689382386,0,15.4993481694734,0,0,0,1.24415452006595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| 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| ||
|short_description=p2@IL2RB | |||
}} | }} |
Latest revision as of 04:13, 20 September 2015
Short description: | p2@IL2RB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL2RB_5end |
Coexpression cluster: | C2644_mycosis_Natural_hairy_cord_anaplastic_CD4_CD8 |
Association with transcript: | -10bp_to_NM_000878, uc003aqv.1_5end |
EntrezGene: | IL2RB |
HGNC: | 6009 |
UniProt: | P14784 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.53e-41 | 52 |
lymphocyte | 1.56e-40 | 53 |
common lymphoid progenitor | 1.56e-40 | 53 |
T cell | 3.91e-37 | 25 |
pro-T cell | 3.91e-37 | 25 |
mature alpha-beta T cell | 9.68e-32 | 18 |
alpha-beta T cell | 9.68e-32 | 18 |
immature T cell | 9.68e-32 | 18 |
mature T cell | 9.68e-32 | 18 |
immature alpha-beta T cell | 9.68e-32 | 18 |
nongranular leukocyte | 1.16e-24 | 115 |
leukocyte | 1.25e-24 | 136 |
hematopoietic cell | 2.09e-22 | 177 |
hematopoietic stem cell | 8.08e-21 | 168 |
CD8-positive, alpha-beta T cell | 5.76e-20 | 11 |
hematopoietic lineage restricted progenitor cell | 2.61e-19 | 120 |
hematopoietic oligopotent progenitor cell | 3.88e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.88e-18 | 161 |
CD4-positive, alpha-beta T cell | 1.46e-11 | 6 |
natural killer cell | 1.65e-07 | 3 |
pro-NK cell | 1.65e-07 | 3 |
basophil | 5.84e-07 | 3 |
single nucleate cell | 9.94e-07 | 3 |
mononuclear cell | 9.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.36e-26 | 15 |
haemolymphatic fluid | 1.36e-26 | 15 |
organism substance | 1.36e-26 | 15 |
hemopoietic organ | 5.09e-12 | 7 |
immune organ | 5.09e-12 | 7 |
hematopoietic system | 1.30e-09 | 98 |
blood island | 1.30e-09 | 98 |
hemolymphoid system | 1.54e-09 | 108 |
thymus | 1.08e-07 | 4 |
hemolymphoid system gland | 1.08e-07 | 4 |
thymic region | 1.08e-07 | 4 |
pharyngeal gland | 1.08e-07 | 4 |
thymus primordium | 1.08e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.48e-09 | 10 |