FFCP PHASE1:Hg19::chr1:206858299..206858314,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:206858299..206858314,+
|short_description=p2@MAPKAPK2
|description=CAGE_peak_2_at_MAPKAPK2_5end
|association_with_transcript=10bp_to_ENST00000294981,uc001h...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9261 | |EntrezGene=9261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6887 | |HGNC=6887 | ||
|TSSclassifier=strong | |||
|UniProt=P49137 | |UniProt=P49137 | ||
|association_with_transcript=10bp_to_ENST00000294981,uc001hel.1,uc001hem.1_5end | |||
|cluster_id=chr1:206858299..206858314,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_MAPKAPK2_5end | |||
|id=chr1:206858299..206858314,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.71e-24!76;CL:0002057!1.06e-23!42;CL:0000738!9.50e-23!140;CL:0000557!3.79e-21!71;CL:0000860!1.93e-20!45;CL:0002009!2.47e-18!65;CL:0000839!1.28e-17!70;CL:0002194!2.64e-17!63;CL:0000576!2.64e-17!63;CL:0000040!2.64e-17!63;CL:0000559!2.64e-17!63;CL:0002031!6.55e-17!124;CL:0000988!2.80e-16!182;CL:0002087!3.51e-16!119;CL:0000037!8.90e-16!172;CL:0000566!8.90e-16!172;CL:0002032!8.04e-14!165;CL:0000837!8.04e-14!165;CL:0000763!1.44e-13!112;CL:0000049!1.44e-13!112;CL:0000048!1.25e-09!430;CL:0002371!3.62e-09!591;CL:0000723!5.72e-09!436;CL:0000034!7.01e-09!444;CL:0002320!1.81e-08!365;CL:0000134!2.56e-08!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.55e-19;33!CL:0002057;9.55e-19;33!CL:0000473;3.57e-16;39!CL:0000234;3.57e-16;39!CL:0000576;7.03e-14;48!CL:0000766;1.08e-13;69!CL:0000094;8.02e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.94e-27,72;CL:0000473,4.20e-24,48;CL:0000234,4.20e-24,48;CL:0000860,5.97e-24,42;CL:0002057,5.97e-24,42;CL:0000738,7.07e-24,136;CL:0000557,1.01e-23,67;CL:0002009,8.81e-21,61;CL:0000839,4.97e-20,66;CL:0002194,1.08e-19,59;CL:0000576,1.08e-19,59;CL:0000040,1.08e-19,59;CL:0000559,1.08e-19,59;CL:0002031,2.78e-18,120;CL:0002087,2.64e-17,115;CL:0000988,2.97e-17,177;CL:0000037,1.14e-16,168;CL:0000763,4.99e-15,108;CL:0000049,4.99e-15,108;CL:0002032,9.99e-15,161;CL:0000837,9.99e-15,161;CL:0000048,1.04e-09,427;CL:0000723,3.81e-09,433;CL:0000034,5.13e-09,441;CL:0002320,1.05e-08,361;CL:0000134,1.68e-08,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.32e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.10e-32!216;UBERON:0002193!3.36e-28!112;UBERON:0002390!5.64e-26!102;UBERON:0003061!5.64e-26!102;UBERON:0002371!1.21e-20!80;UBERON:0002405!7.25e-20!115;UBERON:0001474!1.52e-17!86;UBERON:0002204!7.67e-15!167;UBERON:0004765!1.20e-14!101;UBERON:0001434!1.20e-14!101;UBERON:0001009!2.68e-12!113;UBERON:0004535!4.98e-11!110;UBERON:0000926!8.75e-11!448;UBERON:0004120!8.75e-11!448;UBERON:0006603!8.75e-11!448;UBERON:0004872!1.35e-08!84;UBERON:0000055!7.97e-08!69;UBERON:0002384!1.45e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.76e-33,203;UBERON:0002193,2.14e-30,108;UBERON:0002390,3.62e-28,98;UBERON:0003061,3.62e-28,98;UBERON:0002405,3.92e-25,93;UBERON:0000926,4.68e-23,315;UBERON:0004120,4.68e-23,315;UBERON:0006603,4.68e-23,315;UBERON:0002371,5.83e-23,76;UBERON:0004765,1.19e-19,90;UBERON:0001474,1.70e-19,82;UBERON:0001434,1.29e-15,100;UBERON:0002204,2.40e-15,167;UBERON:0001009,2.09e-12,112;UBERON:0004535,4.04e-11,109;UBERON:0004872,9.48e-09,83;UBERON:0000055,5.61e-08,68;UBERON:0002384,8.18e-08,371 | |||
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| ||
|short_description=p2@MAPKAPK2 | |||
}} | }} |
Latest revision as of 05:34, 20 September 2015
Short description: | p2@MAPKAPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAPKAPK2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 10bp_to_ENST00000294981, uc001hel.1, uc001hem.1_5end |
EntrezGene: | MAPKAPK2 |
HGNC: | 6887 |
UniProt: | P49137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.94e-27 | 72 |
defensive cell | 4.20e-24 | 48 |
phagocyte | 4.20e-24 | 48 |
classical monocyte | 5.97e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.97e-24 | 42 |
leukocyte | 7.07e-24 | 136 |
granulocyte monocyte progenitor cell | 1.01e-23 | 67 |
macrophage dendritic cell progenitor | 8.81e-21 | 61 |
myeloid lineage restricted progenitor cell | 4.97e-20 | 66 |
monopoietic cell | 1.08e-19 | 59 |
monocyte | 1.08e-19 | 59 |
monoblast | 1.08e-19 | 59 |
promonocyte | 1.08e-19 | 59 |
hematopoietic lineage restricted progenitor cell | 2.78e-18 | 120 |
nongranular leukocyte | 2.64e-17 | 115 |
hematopoietic cell | 2.97e-17 | 177 |
hematopoietic stem cell | 1.14e-16 | 168 |
myeloid cell | 4.99e-15 | 108 |
common myeloid progenitor | 4.99e-15 | 108 |
hematopoietic oligopotent progenitor cell | 9.99e-15 | 161 |
hematopoietic multipotent progenitor cell | 9.99e-15 | 161 |
multi fate stem cell | 1.04e-09 | 427 |
somatic stem cell | 3.81e-09 | 433 |
stem cell | 5.13e-09 | 441 |
connective tissue cell | 1.05e-08 | 361 |
mesenchymal cell | 1.68e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.76e-33 | 203 |
hemolymphoid system | 2.14e-30 | 108 |
hematopoietic system | 3.62e-28 | 98 |
blood island | 3.62e-28 | 98 |
immune system | 3.92e-25 | 93 |
mesoderm | 4.68e-23 | 315 |
mesoderm-derived structure | 4.68e-23 | 315 |
presumptive mesoderm | 4.68e-23 | 315 |
bone marrow | 5.83e-23 | 76 |
skeletal element | 1.19e-19 | 90 |
bone element | 1.70e-19 | 82 |
skeletal system | 1.29e-15 | 100 |
musculoskeletal system | 2.40e-15 | 167 |
circulatory system | 2.09e-12 | 112 |
cardiovascular system | 4.04e-11 | 109 |
splanchnic layer of lateral plate mesoderm | 9.48e-09 | 83 |
vessel | 5.61e-08 | 68 |
connective tissue | 8.18e-08 | 371 |