FFCP PHASE1:Hg19::chr10:99094458..99094500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23401 | |EntrezGene=23401 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16048 | |HGNC=16048 | ||
|TSSclassifier=strong | |||
|UniProt=O75474 | |UniProt=O75474 | ||
|association_with_transcript=0bp_to_ENST00000371019,NM_012083,uc001knd.1_5end | |association_with_transcript=0bp_to_ENST00000371019,NM_012083,uc001knd.1_5end | ||
|cluster_id=chr10:99094458..99094500,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_FRAT2_5end | |description=CAGE_peak_1_at_FRAT2_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.34e-22!172;CL:0000566!1.34e-22!172;CL:0002032!8.25e-21!165;CL:0000837!8.25e-21!165;CL:0000988!4.73e-19!182;CL:0000738!4.89e-15!140;CL:0000763!1.92e-14!112;CL:0000049!1.92e-14!112;CL:0002087!2.28e-14!119;CL:0002031!1.66e-12!124;CL:0000766!1.32e-09!76;CL:0000791!1.91e-08!18;CL:0000789!1.91e-08!18;CL:0002420!1.91e-08!18;CL:0002419!1.91e-08!18;CL:0000790!1.91e-08!18;CL:0000860!2.78e-08!45;CL:0002194!9.85e-08!63;CL:0000576!9.85e-08!63;CL:0000040!9.85e-08!63;CL:0000559!9.85e-08!63;CL:0000084!1.75e-07!25;CL:0000827!1.75e-07!25;CL:0002009!2.06e-07!65;CL:0002057!4.36e-07!42;CL:0000838!5.52e-07!52;CL:0000839!8.98e-07!70 | |ontology_enrichment_celltype=CL:0000037!1.34e-22!172;CL:0000566!1.34e-22!172;CL:0002032!8.25e-21!165;CL:0000837!8.25e-21!165;CL:0000988!4.73e-19!182;CL:0000738!4.89e-15!140;CL:0000763!1.92e-14!112;CL:0000049!1.92e-14!112;CL:0002087!2.28e-14!119;CL:0002031!1.66e-12!124;CL:0000766!1.32e-09!76;CL:0000791!1.91e-08!18;CL:0000789!1.91e-08!18;CL:0002420!1.91e-08!18;CL:0002419!1.91e-08!18;CL:0000790!1.91e-08!18;CL:0000860!2.78e-08!45;CL:0002194!9.85e-08!63;CL:0000576!9.85e-08!63;CL:0000040!9.85e-08!63;CL:0000559!9.85e-08!63;CL:0000084!1.75e-07!25;CL:0000827!1.75e-07!25;CL:0002009!2.06e-07!65;CL:0002057!4.36e-07!42;CL:0000838!5.52e-07!52;CL:0000839!8.98e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.61e-08;18!CL:0000789;1.61e-08;18!CL:0002419;1.61e-08;18!CL:0000084;1.47e-07;25 | |ontology_enrichment_celltype_v019=CL:0000791;1.61e-08;18!CL:0000789;1.61e-08;18!CL:0002419;1.61e-08;18!CL:0000084;1.47e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.09e-21,168;CL:0002032,6.33e-20,161;CL:0000837,6.33e-20,161;CL:0000988,2.53e-18,177;CL:0000738,3.09e-14,136;CL:0000763,1.23e-13,108;CL:0000049,1.23e-13,108;CL:0002087,1.52e-13,115;CL:0002031,9.56e-12,120;CL:0000766,7.35e-09,72;CL:0000791,1.91e-08,18;CL:0000789,1.91e-08,18;CL:0002420,1.91e-08,18;CL:0002419,1.91e-08,18;CL:0000790,1.91e-08,18;CL:0000084,1.75e-07,25;CL:0000827,1.75e-07,25;CL:0000860,4.35e-07,42;CL:0002057,4.35e-07,42;CL:0002194,5.44e-07,59;CL:0000576,5.44e-07,59;CL:0000040,5.44e-07,59;CL:0000559,5.44e-07,59;CL:0000838,5.50e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;1.61e-08;18 | |ontology_enrichment_development_v019=CL:0000790;1.61e-08;18 | ||
|ontology_enrichment_disease=DOID:8692!9.05e-08!31;DOID:1240!9.75e-07!39 | |ontology_enrichment_disease=DOID:8692!9.05e-08!31;DOID:1240!9.75e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.24e-07;31 | |ontology_enrichment_disease_v019=DOID:8692;1.24e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,9.04e-08,31;DOID:1240,9.73e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.09e-08!115;UBERON:0002390!1.18e-07!102;UBERON:0003061!1.18e-07!102 | |ontology_enrichment_uberon=UBERON:0007023!4.09e-08!115;UBERON:0002390!1.18e-07!102;UBERON:0003061!1.18e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.45e-08,114;UBERON:0002390,5.18e-07,98;UBERON:0003061,5.18e-07,98 | |||
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| ||
|short_description=p1@FRAT2 | |short_description=p1@FRAT2 | ||
}} | }} |
Latest revision as of 06:18, 20 September 2015
Short description: | p1@FRAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FRAT2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000371019, NM_012083, uc001knd.1_5end |
EntrezGene: | FRAT2 |
HGNC: | 16048 |
UniProt: | O75474 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.09e-21 | 168 |
hematopoietic oligopotent progenitor cell | 6.33e-20 | 161 |
hematopoietic multipotent progenitor cell | 6.33e-20 | 161 |
hematopoietic cell | 2.53e-18 | 177 |
leukocyte | 3.09e-14 | 136 |
myeloid cell | 1.23e-13 | 108 |
common myeloid progenitor | 1.23e-13 | 108 |
nongranular leukocyte | 1.52e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 9.56e-12 | 120 |
myeloid leukocyte | 7.35e-09 | 72 |
mature alpha-beta T cell | 1.91e-08 | 18 |
alpha-beta T cell | 1.91e-08 | 18 |
immature T cell | 1.91e-08 | 18 |
mature T cell | 1.91e-08 | 18 |
immature alpha-beta T cell | 1.91e-08 | 18 |
T cell | 1.75e-07 | 25 |
pro-T cell | 1.75e-07 | 25 |
classical monocyte | 4.35e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.35e-07 | 42 |
monopoietic cell | 5.44e-07 | 59 |
monocyte | 5.44e-07 | 59 |
monoblast | 5.44e-07 | 59 |
promonocyte | 5.44e-07 | 59 |
lymphoid lineage restricted progenitor cell | 5.50e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.45e-08 | 114 |
hematopoietic system | 5.18e-07 | 98 |
blood island | 5.18e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.04e-08 | 31 |
leukemia | 9.73e-07 | 39 |