FFCP PHASE1:Hg19::chr2:217363559..217363573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6168 | |EntrezGene=6168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10348 | |HGNC=10348 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000487233_5end | |association_with_transcript=0bp_to_ENST00000487233_5end | ||
|cluster_id=chr2:217363559..217363573,+ | |||
|description=CAGE_peak_1_at_RPL37A_5end | |description=CAGE_peak_1_at_RPL37A_5end | ||
|id=chr2:217363559..217363573,+ | |id=chr2:217363559..217363573,+ | ||
|ontology_enrichment_celltype=CL:0000144!5.27e-17!625;CL:0000012!1.52e-16!682;CL:0002371!3.33e-15!591;CL:0000548!4.67e-15!679;CL:0000004!4.67e-15!679;CL:0000255!4.67e-15!679;CL:0000003!1.40e-14!722;CL:0000183!1.99e-10!59;CL:0000393!5.10e-09!60;CL:0000211!5.10e-09!60;CL:0000187!2.00e-08!54;CL:0000034!2.03e-08!444;CL:0000192!3.14e-08!42;CL:0000514!3.14e-08!42;CL:0000048!6.30e-08!430;CL:0000723!1.24e-07!436;CL:0000680!1.66e-07!57;CL:0000056!1.66e-07!57;CL:0000355!1.66e-07!57 | |ontology_enrichment_celltype=CL:0000144!5.27e-17!625;CL:0000012!1.52e-16!682;CL:0002371!3.33e-15!591;CL:0000548!4.67e-15!679;CL:0000004!4.67e-15!679;CL:0000255!4.67e-15!679;CL:0000003!1.40e-14!722;CL:0000183!1.99e-10!59;CL:0000393!5.10e-09!60;CL:0000211!5.10e-09!60;CL:0000187!2.00e-08!54;CL:0000034!2.03e-08!444;CL:0000192!3.14e-08!42;CL:0000514!3.14e-08!42;CL:0000048!6.30e-08!430;CL:0000723!1.24e-07!436;CL:0000680!1.66e-07!57;CL:0000056!1.66e-07!57;CL:0000355!1.66e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.80e-09,61;CL:0000211,5.80e-09,61;CL:0000034,6.41e-09,441;CL:0000048,2.05e-08,427;CL:0000187,2.30e-08,55;CL:0000192,3.81e-08,43;CL:0000514,3.81e-08,43;CL:0000723,4.13e-08,433;CL:0000680,1.84e-07,58;CL:0000056,1.84e-07,58;CL:0000355,1.84e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!7.54e-09!70;UBERON:0001134!2.75e-08!61;UBERON:0002036!2.75e-08!61;UBERON:0003082!2.75e-08!61;UBERON:0000486!3.32e-08!82;UBERON:0000914!1.73e-07!83;UBERON:0002329!1.73e-07!83;UBERON:0003077!1.73e-07!83;UBERON:0003059!1.73e-07!83;UBERON:0007282!1.73e-07!83;UBERON:0009618!1.73e-07!83;UBERON:0007285!1.73e-07!83;UBERON:0002385!1.90e-07!63;UBERON:0001015!1.90e-07!63;UBERON:0000383!1.90e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.24e-10,78;UBERON:0002329,8.29e-09,71;UBERON:0003059,8.29e-09,71;UBERON:0007282,8.29e-09,71;UBERON:0004290,8.29e-09,71;UBERON:0009618,8.29e-09,71;UBERON:0007524,1.31e-08,73;UBERON:0003077,2.68e-08,72;UBERON:0007285,2.68e-08,72;UBERON:0001134,3.06e-08,62;UBERON:0002036,3.06e-08,62;UBERON:0003082,3.06e-08,62;UBERON:0000486,3.52e-08,83;UBERON:0002385,2.07e-07,64;UBERON:0001015,2.07e-07,64;UBERON:0000383,2.07e-07,64 | |||
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43428,709.691396201958,2555.25145214907 | ||
|short_description=p1@RPL37A | |short_description=p1@RPL37A | ||
}} | }} |
Latest revision as of 06:21, 20 September 2015
Short description: | p1@RPL37A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL37A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000487233_5end |
EntrezGene: | RPL37A |
HGNC: | 10348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.80e-09 | 61 |
electrically active cell | 5.80e-09 | 61 |
stem cell | 6.41e-09 | 441 |
multi fate stem cell | 2.05e-08 | 427 |
muscle cell | 2.30e-08 | 55 |
smooth muscle cell | 3.81e-08 | 43 |
smooth muscle myoblast | 3.81e-08 | 43 |
somatic stem cell | 4.13e-08 | 433 |
muscle precursor cell | 1.84e-07 | 58 |
myoblast | 1.84e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.84e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.24e-10 | 78 |
somite | 8.29e-09 | 71 |
presomitic mesoderm | 8.29e-09 | 71 |
presumptive segmental plate | 8.29e-09 | 71 |
dermomyotome | 8.29e-09 | 71 |
trunk paraxial mesoderm | 8.29e-09 | 71 |
dense mesenchyme tissue | 1.31e-08 | 73 |
paraxial mesoderm | 2.68e-08 | 72 |
presumptive paraxial mesoderm | 2.68e-08 | 72 |
skeletal muscle tissue | 3.06e-08 | 62 |
striated muscle tissue | 3.06e-08 | 62 |
myotome | 3.06e-08 | 62 |
multilaminar epithelium | 3.52e-08 | 83 |
muscle tissue | 2.07e-07 | 64 |
musculature | 2.07e-07 | 64 |
musculature of body | 2.07e-07 | 64 |