FFCP PHASE1:Hg19::chr18:67624420..67624431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10666 | |EntrezGene=10666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16961 | |HGNC=16961 | ||
|TSSclassifier=strong | |||
|UniProt=Q15762 | |UniProt=Q15762 | ||
|association_with_transcript=-188bp_to_NM_006566,uc002lkm.3_5end | |association_with_transcript=-188bp_to_NM_006566,uc002lkm.3_5end | ||
|cluster_id=chr18:67624420..67624431,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_CD226_5end | |description=CAGE_peak_6_at_CD226_5end | ||
|id=chr18:67624420..67624431,- | |id=chr18:67624420..67624431,- | ||
|ontology_enrichment_celltype=CL:0002087!1.31e-26!119;CL:0000738!2.95e-23!140;CL:0000791!3.81e-22!18;CL:0000789!3.81e-22!18;CL:0002420!3.81e-22!18;CL:0002419!3.81e-22!18;CL:0000790!3.81e-22!18;CL:0002031!3.59e-21!124;CL:0000084!1.58e-18!25;CL:0000827!1.58e-18!25;CL:0000625!8.95e-18!11;CL:0000037!1.69e-16!172;CL:0000566!1.69e-16!172;CL:0000988!1.15e-14!182;CL:0002032!2.25e-14!165;CL:0000837!2.25e-14!165;CL:0002194!2.00e-12!63;CL:0000576!2.00e-12!63;CL:0000040!2.00e-12!63;CL:0000559!2.00e-12!63;CL:0000838!5.50e-12!52;CL:0002009!8.51e-12!65;CL:0000542!1.27e-11!53;CL:0000051!1.27e-11!53;CL:0000839!2.16e-10!70;CL:0000557!3.88e-10!71;CL:0000766!7.06e-10!76;CL:0002057!1.11e-08!42;CL:0000860!9.12e-08!45;CL:0000624!9.32e-08!6 | |ontology_enrichment_celltype=CL:0002087!1.31e-26!119;CL:0000738!2.95e-23!140;CL:0000791!3.81e-22!18;CL:0000789!3.81e-22!18;CL:0002420!3.81e-22!18;CL:0002419!3.81e-22!18;CL:0000790!3.81e-22!18;CL:0002031!3.59e-21!124;CL:0000084!1.58e-18!25;CL:0000827!1.58e-18!25;CL:0000625!8.95e-18!11;CL:0000037!1.69e-16!172;CL:0000566!1.69e-16!172;CL:0000988!1.15e-14!182;CL:0002032!2.25e-14!165;CL:0000837!2.25e-14!165;CL:0002194!2.00e-12!63;CL:0000576!2.00e-12!63;CL:0000040!2.00e-12!63;CL:0000559!2.00e-12!63;CL:0000838!5.50e-12!52;CL:0002009!8.51e-12!65;CL:0000542!1.27e-11!53;CL:0000051!1.27e-11!53;CL:0000839!2.16e-10!70;CL:0000557!3.88e-10!71;CL:0000766!7.06e-10!76;CL:0002057!1.11e-08!42;CL:0000860!9.12e-08!45;CL:0000624!9.32e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.21e-38;18!CL:0000789;9.21e-38;18!CL:0002419;9.21e-38;18!CL:0000084;2.76e-30;25!CL:0000625;3.81e-26;11!CL:0000624;1.24e-15;6!CL:0000226;5.09e-11;3!CL:0000842;5.09e-11;3!CL:0000542;3.47e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.11e-38,18;CL:0000789,4.11e-38,18;CL:0002420,4.11e-38,18;CL:0002419,4.11e-38,18;CL:0000790,4.11e-38,18;CL:0000084,1.34e-30,25;CL:0000827,1.34e-30,25;CL:0000625,3.37e-26,11;CL:0002087,3.60e-16,115;CL:0000624,5.89e-16,6;CL:0000838,1.19e-14,52;CL:0000542,2.66e-14,53;CL:0000051,2.66e-14,53;CL:0000738,7.32e-14,136;CL:0002031,1.93e-11,120;CL:0000226,2.42e-11,3;CL:0000842,2.42e-11,3;CL:0000037,5.57e-10,168;CL:0000988,3.78e-09,177;CL:0002032,5.99e-08,161;CL:0000837,5.99e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000790;9.21e-38;18!CL:0000051;3.47e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.97e-16!102;UBERON:0003061!1.97e-16!102;UBERON:0007023!8.77e-16!115;UBERON:0002193!9.06e-16!112;UBERON:0002780!1.39e-10!41;UBERON:0001890!1.39e-10!41;UBERON:0006240!1.39e-10!41;UBERON:0001049!1.91e-10!57;UBERON:0005068!1.91e-10!57;UBERON:0006241!1.91e-10!57;UBERON:0007135!1.91e-10!57;UBERON:0003080!3.35e-10!42;UBERON:0001893!8.84e-10!34;UBERON:0002020!9.82e-10!34;UBERON:0003528!9.82e-10!34;UBERON:0002791!4.92e-09!33;UBERON:0002616!7.82e-09!59;UBERON:0001869!2.08e-08!32;UBERON:0002371!3.74e-08!80;UBERON:0002308!4.11e-08!9;UBERON:0000125!4.11e-08!9;UBERON:0002405!4.65e-08!115;UBERON:0000178!9.41e-08!15;UBERON:0000179!9.41e-08!15;UBERON:0000463!9.41e-08!15;UBERON:0001474!4.36e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.17e-14;15!UBERON:0000179;5.17e-14;15!UBERON:0000463;5.17e-14;15!UBERON:0002390;1.56e-10;32!UBERON:0002370;6.67e-08;2!UBERON:0005058;6.67e-08;2!UBERON:0009113;6.67e-08;2!UBERON:0004177;8.74e-07;5!UBERON:0005057;8.74e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.88e-14,15;UBERON:0000179,3.88e-14,15;UBERON:0000463,3.88e-14,15;UBERON:0002390,1.92e-09,98;UBERON:0003061,1.92e-09,98;UBERON:0002370,8.60e-09,4;UBERON:0005058,8.60e-09,4;UBERON:0009113,8.60e-09,4;UBERON:0003295,8.60e-09,4;UBERON:0005562,8.60e-09,4;UBERON:0004177,2.21e-08,7;UBERON:0005057,2.21e-08,7;UBERON:0002193,3.62e-08,108 | |||
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|short_description=p6@CD226 | |short_description=p6@CD226 | ||
}} | }} |
Latest revision as of 06:51, 20 September 2015
Short description: | p6@CD226 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD226_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -188bp_to_NM_006566, uc002lkm.3_5end |
EntrezGene: | CD226 |
HGNC: | 16961 |
UniProt: | Q15762 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.11e-38 | 18 |
alpha-beta T cell | 4.11e-38 | 18 |
immature T cell | 4.11e-38 | 18 |
mature T cell | 4.11e-38 | 18 |
immature alpha-beta T cell | 4.11e-38 | 18 |
T cell | 1.34e-30 | 25 |
pro-T cell | 1.34e-30 | 25 |
CD8-positive, alpha-beta T cell | 3.37e-26 | 11 |
nongranular leukocyte | 3.60e-16 | 115 |
CD4-positive, alpha-beta T cell | 5.89e-16 | 6 |
lymphoid lineage restricted progenitor cell | 1.19e-14 | 52 |
lymphocyte | 2.66e-14 | 53 |
common lymphoid progenitor | 2.66e-14 | 53 |
leukocyte | 7.32e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.93e-11 | 120 |
single nucleate cell | 2.42e-11 | 3 |
mononuclear cell | 2.42e-11 | 3 |
hematopoietic stem cell | 5.57e-10 | 168 |
hematopoietic cell | 3.78e-09 | 177 |
hematopoietic oligopotent progenitor cell | 5.99e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.99e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 3.88e-14 | 15 |
haemolymphatic fluid | 3.88e-14 | 15 |
organism substance | 3.88e-14 | 15 |
hematopoietic system | 1.92e-09 | 98 |
blood island | 1.92e-09 | 98 |
thymus | 8.60e-09 | 4 |
hemolymphoid system gland | 8.60e-09 | 4 |
thymic region | 8.60e-09 | 4 |
pharyngeal gland | 8.60e-09 | 4 |
thymus primordium | 8.60e-09 | 4 |
hemopoietic organ | 2.21e-08 | 7 |
immune organ | 2.21e-08 | 7 |
hemolymphoid system | 3.62e-08 | 108 |