FFCP PHASE1:Hg19::chr17:39942245..39942256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3728 | |EntrezGene=3728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |HGNC=6207 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKY1 | |UniProt=C9JKY1 | ||
|association_with_transcript=65bp_to_ENST00000449889_5end | |association_with_transcript=65bp_to_ENST00000449889_5end | ||
|cluster_id=chr17:39942245..39942256,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_9_at_JUP_5end | |description=CAGE_peak_9_at_JUP_5end | ||
|id=chr17:39942245..39942256,- | |id=chr17:39942245..39942256,- | ||
|ontology_enrichment_celltype=CL:0000066!1.52e-48!254;CL:0002076!1.07e-30!43;CL:0000223!1.31e-22!59;CL:0002251!7.08e-16!21;CL:0002368!7.51e-14!13;CL:0002159!1.32e-09!13;CL:0002202!1.33e-09!9;CL:0002632!1.33e-09!9;CL:0000082!4.01e-07!19;CL:0000622!6.29e-07!5 | |ontology_enrichment_celltype=CL:0000066!1.52e-48!254;CL:0002076!1.07e-30!43;CL:0000223!1.31e-22!59;CL:0002251!7.08e-16!21;CL:0002368!7.51e-14!13;CL:0002159!1.32e-09!13;CL:0002202!1.33e-09!9;CL:0002632!1.33e-09!9;CL:0000082!4.01e-07!19;CL:0000622!6.29e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.16e-31;42!CL:0002368;9.69e-29;13!CL:0002202;1.67e-19;9!CL:0002632;1.67e-19;9!CL:0002159;1.26e-18;14!CL:0002251;1.44e-17;20!CL:0002328;5.13e-10;3!CL:0000307;1.55e-09;3!CL:0002621;2.40e-09;3!CL:0000622;4.01e-09;5!CL:0002166;1.74e-08;3!CL:0002077;2.41e-08;34!CL:0000240;3.76e-08;6!CL:0000311;3.76e-08;6!CL:0000079;3.76e-08;6!CL:0000237;3.76e-08;6!CL:0000362;6.36e-08;9!CL:0000154;1.34e-07;6!CL:0000575;2.53e-07;2!CL:0000244;4.08e-07;4!CL:0000731;4.08e-07;4!CL:0002327;8.29e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.02e-41,42;CL:0000066,7.96e-34,253;CL:0000223,5.62e-30,58;CL:0002368,1.20e-28,13;CL:0002202,1.85e-19,9;CL:0002632,1.85e-19,9;CL:0002159,9.51e-19,14;CL:0002251,1.20e-17,20;CL:0000076,4.11e-10,63;CL:0002328,5.15e-10,3;CL:0002077,1.41e-09,34;CL:0000068,1.51e-09,3;CL:0000069,1.51e-09,3;CL:0000307,1.51e-09,3;CL:0000377,1.51e-09,3;CL:0002621,1.79e-09,3;CL:0000622,4.25e-09,5;CL:0002166,8.78e-09,3;CL:0002321,3.33e-08,250;CL:0000240,4.92e-08,6;CL:0000311,4.92e-08,6;CL:0000079,4.92e-08,6;CL:0000237,4.92e-08,6;CL:0000036,4.92e-08,6;CL:0000357,4.92e-08,6;CL:0000114,4.92e-08,6;CL:0000362,7.85e-08,9;CL:0000154,1.40e-07,6;CL:0000575,2.28e-07,2;CL:0000244,3.68e-07,4;CL:0000731,3.68e-07,4;CL:0002327,8.39e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.80e-16;58!CL:0000377;1.55e-09;3!CL:0000357;3.76e-08;6!CL:0000114;3.76e-08;6 | |||
|ontology_enrichment_disease=DOID:305!5.84e-31!106;DOID:0050687!1.17e-21!143;DOID:1749!4.73e-14!14;DOID:299!7.88e-13!25;DOID:162!4.27e-10!235;DOID:14566!1.79e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.24e-18;14!DOID:299;2.71e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.97e-18,14;DOID:305,1.59e-10,106;DOID:299,2.85e-07,25;DOID:0050687,6.63e-07,143;DOID:3493,9.05e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.24e-22!169;UBERON:0000925!1.24e-22!169;UBERON:0006595!1.24e-22!169;UBERON:0001004!4.15e-21!72;UBERON:0001007!2.73e-17!155;UBERON:0001555!2.73e-17!155;UBERON:0007026!2.73e-17!155;UBERON:0000065!3.75e-17!53;UBERON:0000077!5.73e-16!130;UBERON:0004921!8.76e-16!129;UBERON:0004185!8.76e-16!129;UBERON:0000072!2.44e-15!46;UBERON:0001041!1.62e-12!98;UBERON:0008947!3.11e-12!38;UBERON:0003258!3.11e-12!38;UBERON:0000161!1.87e-11!35;UBERON:0006554!8.35e-11!44;UBERON:0000464!1.61e-10!104;UBERON:0001008!2.13e-10!45;UBERON:0005153!2.47e-10!37;UBERON:0000064!2.10e-09!219;UBERON:0000166!2.43e-09!21;UBERON:0005157!3.72e-09!51;UBERON:0000344!4.07e-09!12;UBERON:0005911!6.22e-09!82;UBERON:0000466!6.59e-09!126;UBERON:0004807!1.06e-08!28;UBERON:0003104!1.29e-08!238;UBERON:0009142!1.29e-08!238;UBERON:0001557!2.10e-08!19;UBERON:0005178!5.89e-08!34;UBERON:0002224!5.89e-08!34;UBERON:0000062!7.50e-08!511;UBERON:0005181!1.40e-07!35;UBERON:0005177!1.43e-07!107;UBERON:0000002!3.40e-07!6;UBERON:0001560!3.40e-07!6;UBERON:0000365!3.44e-07!5;UBERON:0003064!3.53e-07!37;UBERON:0003729!3.67e-07!5;UBERON:0004802!4.01e-07!19;UBERON:0000115!4.01e-07!19;UBERON:0000165!4.09e-07!28;UBERON:0000930!4.09e-07!28;UBERON:0001737!7.05e-07!9;UBERON:0009569!8.37e-07!113 | |ontology_enrichment_uberon=UBERON:0004119!1.24e-22!169;UBERON:0000925!1.24e-22!169;UBERON:0006595!1.24e-22!169;UBERON:0001004!4.15e-21!72;UBERON:0001007!2.73e-17!155;UBERON:0001555!2.73e-17!155;UBERON:0007026!2.73e-17!155;UBERON:0000065!3.75e-17!53;UBERON:0000077!5.73e-16!130;UBERON:0004921!8.76e-16!129;UBERON:0004185!8.76e-16!129;UBERON:0000072!2.44e-15!46;UBERON:0001041!1.62e-12!98;UBERON:0008947!3.11e-12!38;UBERON:0003258!3.11e-12!38;UBERON:0000161!1.87e-11!35;UBERON:0006554!8.35e-11!44;UBERON:0000464!1.61e-10!104;UBERON:0001008!2.13e-10!45;UBERON:0005153!2.47e-10!37;UBERON:0000064!2.10e-09!219;UBERON:0000166!2.43e-09!21;UBERON:0005157!3.72e-09!51;UBERON:0000344!4.07e-09!12;UBERON:0005911!6.22e-09!82;UBERON:0000466!6.59e-09!126;UBERON:0004807!1.06e-08!28;UBERON:0003104!1.29e-08!238;UBERON:0009142!1.29e-08!238;UBERON:0001557!2.10e-08!19;UBERON:0005178!5.89e-08!34;UBERON:0002224!5.89e-08!34;UBERON:0000062!7.50e-08!511;UBERON:0005181!1.40e-07!35;UBERON:0005177!1.43e-07!107;UBERON:0000002!3.40e-07!6;UBERON:0001560!3.40e-07!6;UBERON:0000365!3.44e-07!5;UBERON:0003064!3.53e-07!37;UBERON:0003729!3.67e-07!5;UBERON:0004802!4.01e-07!19;UBERON:0000115!4.01e-07!19;UBERON:0000165!4.09e-07!28;UBERON:0000930!4.09e-07!28;UBERON:0001737!7.05e-07!9;UBERON:0009569!8.37e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0000344;3.42e-14;20!UBERON:0000161;1.26e-12;19!UBERON:0000166;1.26e-12;19!UBERON:0003729;1.47e-12;13!UBERON:0000165;1.31e-11;28!UBERON:0003343;3.10e-11;4!UBERON:0004785;3.10e-11;4!UBERON:0007196;4.24e-11;15!UBERON:0001558;4.24e-11;15!UBERON:0000486;1.02e-10;12!UBERON:0004815;5.13e-10;3!UBERON:0002031;5.13e-10;3!UBERON:0001949;2.40e-09;3!UBERON:0000365;3.12e-09;5!UBERON:0005911;3.65e-09;36!UBERON:0004807;4.90e-09;22!UBERON:0005178;6.81e-08;34!UBERON:0002224;6.81e-08;34!UBERON:0005910;1.09e-07;6!UBERON:0001004;1.46e-07;65!UBERON:0000974;1.71e-07;6!UBERON:0005181;2.91e-07;35!UBERON:0001911;8.29e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,7.26e-17,74;UBERON:0004119,5.25e-16,160;UBERON:0000925,5.25e-16,160;UBERON:0006595,5.25e-16,160;UBERON:0000344,2.77e-14,20;UBERON:0000166,4.97e-13,22;UBERON:0003729,1.35e-12,13;UBERON:0003102,2.90e-12,99;UBERON:0000161,1.03e-11,36;UBERON:0003343,3.15e-11,4;UBERON:0004785,3.15e-11,4;UBERON:0000165,3.65e-11,29;UBERON:0000930,3.65e-11,29;UBERON:0007196,4.50e-11,15;UBERON:0001558,4.50e-11,15;UBERON:0001007,4.81e-11,145;UBERON:0001555,4.81e-11,145;UBERON:0007026,4.81e-11,145;UBERON:0000065,1.42e-10,54;UBERON:0000033,3.21e-10,56;UBERON:0004815,5.15e-10,3;UBERON:0002031,5.15e-10,3;UBERON:0001949,1.79e-09,3;UBERON:0000365,2.26e-09,5;UBERON:0000153,7.72e-09,62;UBERON:0007811,7.72e-09,62;UBERON:0005178,4.09e-08,34;UBERON:0002224,4.09e-08,34;UBERON:0001444,5.10e-08,49;UBERON:0005181,8.16e-08,35;UBERON:0005910,8.34e-08,6;UBERON:0001041,8.61e-08,87;UBERON:0005157,2.48e-07,47;UBERON:0004921,2.80e-07,118;UBERON:0000072,3.79e-07,47;UBERON:0005153,6.49e-07,37;UBERON:0001911,8.39e-07,4;UBERON:0005333,8.39e-07,4;UBERON:0008425,8.39e-07,4;UBERON:0005311,8.39e-07,4;UBERON:0004807,9.51e-07,28 | |||
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|short_description=p9@JUP | |short_description=p9@JUP | ||
}} | }} |
Latest revision as of 07:16, 20 September 2015
Short description: | p9@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_JUP_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 65bp_to_ENST00000449889_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9JKY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.97e-18 | 14 |
carcinoma | 1.59e-10 | 106 |
adenocarcinoma | 2.85e-07 | 25 |
cell type cancer | 6.63e-07 | 143 |
signet ring cell adenocarcinoma | 9.05e-07 | 2 |