FFCP PHASE1:Hg19::chr20:19867009..19867024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |UniProt=Q8WYP3 | ||
|association_with_transcript=-140bp_to_ENST00000255006,NM_001242581_5end | |association_with_transcript=-140bp_to_ENST00000255006,NM_001242581_5end | ||
|cluster_id=chr20:19867009..19867024,+ | |||
|description=CAGE_peak_17_at_RIN2_5end | |description=CAGE_peak_17_at_RIN2_5end | ||
|id=chr20:19867009..19867024,+ | |id=chr20:19867009..19867024,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.07e-21!24;CL:0000071!9.36e-18!18;CL:0002546!9.36e-18!18;CL:0000115!1.66e-16!35;CL:0002078!3.87e-11!44;CL:0000222!5.35e-11!119;CL:1000413!1.39e-09!9;CL:0000213!1.85e-09!57;CL:0000215!1.85e-09!57;CL:0002539!2.10e-08!10;CL:0000359!3.53e-08!32;CL:0000192!6.46e-07!42;CL:0000514!6.46e-07!42;CL:0002544!7.65e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.07e-21!24;CL:0000071!9.36e-18!18;CL:0002546!9.36e-18!18;CL:0000115!1.66e-16!35;CL:0002078!3.87e-11!44;CL:0000222!5.35e-11!119;CL:1000413!1.39e-09!9;CL:0000213!1.85e-09!57;CL:0000215!1.85e-09!57;CL:0002539!2.10e-08!10;CL:0000359!3.53e-08!32;CL:0000192!6.46e-07!42;CL:0000514!6.46e-07!42;CL:0002544!7.65e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.07e-32;24!CL:0000115;1.13e-27;36!CL:0000071;6.78e-21;18!CL:0002078;2.25e-16;45!CL:0000213;1.66e-14;58!CL:0000215;1.66e-14;58!CL:0002138;4.61e-14;6!CL:0002144;1.37e-11;3!CL:0002539;2.52e-11;10!CL:0002579;2.48e-10;3!CL:1000413;1.84e-09;9!CL:0002545;3.41e-08;2!CL:0002262;8.24e-08;2!CL:1000398;8.24e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.59e-33,36;CL:0002139,4.11e-33,24;CL:0002078,1.39e-25,45;CL:0000071,2.32e-21,18;CL:0002546,2.32e-21,18;CL:0000213,8.38e-21,58;CL:0000215,8.38e-21,58;CL:0000222,4.42e-19,121;CL:0005020,6.07e-14,6;CL:0002138,6.07e-14,6;CL:0005022,6.07e-14,6;CL:0002144,1.39e-11,3;CL:0002539,2.05e-11,10;CL:0002579,6.72e-10,3;CL:1000413,1.31e-09,9;CL:0002321,1.83e-09,250;CL:0002545,2.88e-08,2;CL:0002262,5.79e-08,2;CL:1000398,5.79e-08,2;CL:0000359,7.20e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;6.78e-21;18!CL:0005022;4.61e-14;6!CL:0000222;7.40e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.74e-36!241;UBERON:0000025!6.63e-34!194;UBERON:0000477!8.05e-32!286;UBERON:0000055!5.19e-28!69;UBERON:0001981!2.51e-26!60;UBERON:0007500!2.51e-26!60;UBERON:0004537!2.51e-26!60;UBERON:0006965!2.51e-26!60;UBERON:0002049!4.68e-26!79;UBERON:0007798!4.68e-26!79;UBERON:0000483!5.73e-25!309;UBERON:0000119!6.56e-25!312;UBERON:0004872!2.89e-22!84;UBERON:0007023!7.73e-22!115;UBERON:0001049!4.81e-20!57;UBERON:0005068!4.81e-20!57;UBERON:0006241!4.81e-20!57;UBERON:0007135!4.81e-20!57;UBERON:0003080!2.94e-19!42;UBERON:0002780!1.54e-18!41;UBERON:0001890!1.54e-18!41;UBERON:0006240!1.54e-18!41;UBERON:0001986!9.36e-18!18;UBERON:0004638!9.36e-18!18;UBERON:0004852!9.36e-18!18;UBERON:0001637!1.21e-17!42;UBERON:0003509!1.21e-17!42;UBERON:0004572!1.21e-17!42;UBERON:0001009!1.23e-17!113;UBERON:0002616!2.17e-17!59;UBERON:0004535!5.51e-17!110;UBERON:0003075!6.14e-17!86;UBERON:0007284!6.14e-17!86;UBERON:0003914!9.44e-16!118;UBERON:0000490!1.43e-15!138;UBERON:0002346!1.94e-15!90;UBERON:0000955!2.27e-15!69;UBERON:0006238!2.27e-15!69;UBERON:0001893!3.17e-15!34;UBERON:0000487!3.56e-15!22;UBERON:0002020!4.18e-15!34;UBERON:0003528!4.18e-15!34;UBERON:0003056!1.31e-14!61;UBERON:0002791!1.92e-14!33;UBERON:0004573!3.70e-14!33;UBERON:0004571!3.70e-14!33;UBERON:0001017!4.26e-14!82;UBERON:0000467!5.87e-14!625;UBERON:0001869!6.53e-14!32;UBERON:0000480!7.62e-14!626;UBERON:0005743!1.69e-13!86;UBERON:0000475!1.80e-13!365;UBERON:0000947!3.91e-13!21;UBERON:0010191!3.91e-13!21;UBERON:0000468!1.61e-12!659;UBERON:0006914!1.72e-12!25;UBERON:0002619!7.86e-12!22;UBERON:0000073!7.42e-11!94;UBERON:0001016!7.42e-11!94;UBERON:0001950!2.55e-10!20;UBERON:0000956!9.69e-10!25;UBERON:0000203!9.69e-10!25;UBERON:0003915!1.39e-09!9;UBERON:0004700!1.39e-09!9;UBERON:0001917!1.39e-09!9;UBERON:0000923!2.08e-09!604;UBERON:0005291!2.08e-09!604;UBERON:0006598!2.08e-09!604;UBERON:0002532!2.08e-09!604;UBERON:0002050!2.59e-09!605;UBERON:0005423!2.59e-09!605;UBERON:0000481!3.19e-09!347;UBERON:0000033!4.64e-09!123;UBERON:0000922!5.25e-09!612;UBERON:0004237!2.10e-08!10;UBERON:0004695!2.10e-08!10;UBERON:0002111!2.10e-08!10;UBERON:0004178!2.10e-08!10;UBERON:0001135!4.11e-08!15;UBERON:0000153!5.75e-08!129;UBERON:0007811!5.75e-08!129;UBERON:0002420!9.13e-08!9;UBERON:0007245!9.13e-08!9;UBERON:0010009!9.13e-08!9;UBERON:0010011!9.13e-08!9;UBERON:0000454!9.13e-08!9;UBERON:0002308!3.28e-07!9;UBERON:0000125!3.28e-07!9 | |ontology_enrichment_uberon=UBERON:0004111!3.74e-36!241;UBERON:0000025!6.63e-34!194;UBERON:0000477!8.05e-32!286;UBERON:0000055!5.19e-28!69;UBERON:0001981!2.51e-26!60;UBERON:0007500!2.51e-26!60;UBERON:0004537!2.51e-26!60;UBERON:0006965!2.51e-26!60;UBERON:0002049!4.68e-26!79;UBERON:0007798!4.68e-26!79;UBERON:0000483!5.73e-25!309;UBERON:0000119!6.56e-25!312;UBERON:0004872!2.89e-22!84;UBERON:0007023!7.73e-22!115;UBERON:0001049!4.81e-20!57;UBERON:0005068!4.81e-20!57;UBERON:0006241!4.81e-20!57;UBERON:0007135!4.81e-20!57;UBERON:0003080!2.94e-19!42;UBERON:0002780!1.54e-18!41;UBERON:0001890!1.54e-18!41;UBERON:0006240!1.54e-18!41;UBERON:0001986!9.36e-18!18;UBERON:0004638!9.36e-18!18;UBERON:0004852!9.36e-18!18;UBERON:0001637!1.21e-17!42;UBERON:0003509!1.21e-17!42;UBERON:0004572!1.21e-17!42;UBERON:0001009!1.23e-17!113;UBERON:0002616!2.17e-17!59;UBERON:0004535!5.51e-17!110;UBERON:0003075!6.14e-17!86;UBERON:0007284!6.14e-17!86;UBERON:0003914!9.44e-16!118;UBERON:0000490!1.43e-15!138;UBERON:0002346!1.94e-15!90;UBERON:0000955!2.27e-15!69;UBERON:0006238!2.27e-15!69;UBERON:0001893!3.17e-15!34;UBERON:0000487!3.56e-15!22;UBERON:0002020!4.18e-15!34;UBERON:0003528!4.18e-15!34;UBERON:0003056!1.31e-14!61;UBERON:0002791!1.92e-14!33;UBERON:0004573!3.70e-14!33;UBERON:0004571!3.70e-14!33;UBERON:0001017!4.26e-14!82;UBERON:0000467!5.87e-14!625;UBERON:0001869!6.53e-14!32;UBERON:0000480!7.62e-14!626;UBERON:0005743!1.69e-13!86;UBERON:0000475!1.80e-13!365;UBERON:0000947!3.91e-13!21;UBERON:0010191!3.91e-13!21;UBERON:0000468!1.61e-12!659;UBERON:0006914!1.72e-12!25;UBERON:0002619!7.86e-12!22;UBERON:0000073!7.42e-11!94;UBERON:0001016!7.42e-11!94;UBERON:0001950!2.55e-10!20;UBERON:0000956!9.69e-10!25;UBERON:0000203!9.69e-10!25;UBERON:0003915!1.39e-09!9;UBERON:0004700!1.39e-09!9;UBERON:0001917!1.39e-09!9;UBERON:0000923!2.08e-09!604;UBERON:0005291!2.08e-09!604;UBERON:0006598!2.08e-09!604;UBERON:0002532!2.08e-09!604;UBERON:0002050!2.59e-09!605;UBERON:0005423!2.59e-09!605;UBERON:0000481!3.19e-09!347;UBERON:0000033!4.64e-09!123;UBERON:0000922!5.25e-09!612;UBERON:0004237!2.10e-08!10;UBERON:0004695!2.10e-08!10;UBERON:0002111!2.10e-08!10;UBERON:0004178!2.10e-08!10;UBERON:0001135!4.11e-08!15;UBERON:0000153!5.75e-08!129;UBERON:0007811!5.75e-08!129;UBERON:0002420!9.13e-08!9;UBERON:0007245!9.13e-08!9;UBERON:0010009!9.13e-08!9;UBERON:0010011!9.13e-08!9;UBERON:0000454!9.13e-08!9;UBERON:0002308!3.28e-07!9;UBERON:0000125!3.28e-07!9 | ||
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| ||
|short_description=p17@RIN2 | |short_description=p17@RIN2 | ||
}} | }} |
Latest revision as of 16:04, 24 September 2015
Short description: | p17@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -140bp_to_ENST00000255006, NM_001242581_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.59e-33 | 36 |
endothelial cell of vascular tree | 4.11e-33 | 24 |
meso-epithelial cell | 1.39e-25 | 45 |
blood vessel endothelial cell | 2.32e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.32e-21 | 18 |
lining cell | 8.38e-21 | 58 |
barrier cell | 8.38e-21 | 58 |
mesodermal cell | 4.42e-19 | 121 |
lymphangioblast | 6.07e-14 | 6 |
endothelial cell of lymphatic vessel | 6.07e-14 | 6 |
vascular lymphangioblast | 6.07e-14 | 6 |
capillary endothelial cell | 1.39e-11 | 3 |
aortic smooth muscle cell | 2.05e-11 | 10 |
omentum preadipocyte | 6.72e-10 | 3 |
endothelial cell of artery | 1.31e-09 | 9 |
embryonic cell | 1.83e-09 | 250 |
thoracic aorta endothelial cell | 2.88e-08 | 2 |
endothelial cell of sinusoid | 5.79e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.79e-08 | 2 |
vascular associated smooth muscle cell | 7.20e-07 | 32 |