FFCP PHASE1:Hg19::chr20:19867009..19867024,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:19867009..19867024,+
|short_description=p17@RIN2
|description=CAGE_peak_17_at_RIN2_5end
|association_with_transcript=-140bp_to_ENST00000255006,NM_00124258...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |UniProt=Q8WYP3 | ||
|association_with_transcript=-140bp_to_ENST00000255006,NM_001242581_5end | |||
|cluster_id=chr20:19867009..19867024,+ | |||
|description=CAGE_peak_17_at_RIN2_5end | |||
|id=chr20:19867009..19867024,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.07e-21!24;CL:0000071!9.36e-18!18;CL:0002546!9.36e-18!18;CL:0000115!1.66e-16!35;CL:0002078!3.87e-11!44;CL:0000222!5.35e-11!119;CL:1000413!1.39e-09!9;CL:0000213!1.85e-09!57;CL:0000215!1.85e-09!57;CL:0002539!2.10e-08!10;CL:0000359!3.53e-08!32;CL:0000192!6.46e-07!42;CL:0000514!6.46e-07!42;CL:0002544!7.65e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.07e-32;24!CL:0000115;1.13e-27;36!CL:0000071;6.78e-21;18!CL:0002078;2.25e-16;45!CL:0000213;1.66e-14;58!CL:0000215;1.66e-14;58!CL:0002138;4.61e-14;6!CL:0002144;1.37e-11;3!CL:0002539;2.52e-11;10!CL:0002579;2.48e-10;3!CL:1000413;1.84e-09;9!CL:0002545;3.41e-08;2!CL:0002262;8.24e-08;2!CL:1000398;8.24e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.59e-33,36;CL:0002139,4.11e-33,24;CL:0002078,1.39e-25,45;CL:0000071,2.32e-21,18;CL:0002546,2.32e-21,18;CL:0000213,8.38e-21,58;CL:0000215,8.38e-21,58;CL:0000222,4.42e-19,121;CL:0005020,6.07e-14,6;CL:0002138,6.07e-14,6;CL:0005022,6.07e-14,6;CL:0002144,1.39e-11,3;CL:0002539,2.05e-11,10;CL:0002579,6.72e-10,3;CL:1000413,1.31e-09,9;CL:0002321,1.83e-09,250;CL:0002545,2.88e-08,2;CL:0002262,5.79e-08,2;CL:1000398,5.79e-08,2;CL:0000359,7.20e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;6.78e-21;18!CL:0005022;4.61e-14;6!CL:0000222;7.40e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;6.78e-21;18!UBERON:0001986;6.78e-21;18!UBERON:0004852;6.78e-21;18!UBERON:0000487;8.30e-20;22!UBERON:0006914;4.25e-17;25!UBERON:0000055;3.26e-14;65!UBERON:0000490;5.49e-14;33!UBERON:0007500;7.45e-13;56!UBERON:0001981;7.45e-13;56!UBERON:0004537;7.45e-13;56!UBERON:0002049;4.03e-12;75!UBERON:0007798;4.03e-12;75!UBERON:0010523;1.37e-11;3!UBERON:0001915;1.37e-11;3!UBERON:0001982;1.37e-11;3!UBERON:0004237;2.52e-11;10!UBERON:0004695;2.52e-11;10!UBERON:0002111;2.52e-11;10!UBERON:0004178;2.52e-11;10!UBERON:0000947;2.70e-11;21!UBERON:0010191;2.70e-11;21!UBERON:0001473;1.83e-10;8!UBERON:0004536;1.83e-10;8!UBERON:0006558;1.83e-10;8!UBERON:0003914;9.08e-10;74!UBERON:0004573;9.81e-10;33!UBERON:0004571;9.81e-10;33!UBERON:0001637;1.16e-09;42!UBERON:0003509;1.16e-09;42!UBERON:0004572;1.16e-09;42!UBERON:0003915;1.84e-09;9!UBERON:0004700;1.84e-09;9!UBERON:0001917;1.84e-09;9!UBERON:0003688;7.89e-09;6!UBERON:0002358;7.89e-09;6!UBERON:0003684;7.89e-09;6!UBERON:0001178;7.89e-09;6!UBERON:0002465;2.66e-08;10!UBERON:0005800;3.41e-08;2!UBERON:0001515;3.41e-08;2!UBERON:0001281;8.24e-08;2!UBERON:0003497;8.24e-08;2!UBERON:0003909;8.24e-08;2!UBERON:0003835;8.24e-08;2!UBERON:0001876;1.94e-07;2!UBERON:0001135;2.50e-07;15!UBERON:0000025;8.51e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.07e-29,68;UBERON:0002049,5.70e-25,78;UBERON:0007798,5.70e-25,78;UBERON:0007500,1.68e-22,59;UBERON:0001981,1.68e-22,59;UBERON:0004537,1.68e-22,59;UBERON:0006965,1.68e-22,59;UBERON:0004638,2.32e-21,18;UBERON:0001986,2.32e-21,18;UBERON:0004852,2.32e-21,18;UBERON:0000487,2.64e-20,22;UBERON:0006914,1.57e-17,25;UBERON:0004872,1.77e-17,83;UBERON:0004535,2.94e-17,109;UBERON:0001009,1.32e-16,112;UBERON:0004111,1.42e-15,240;UBERON:0003914,4.96e-13,117;UBERON:0000025,1.29e-12,192;UBERON:0001637,1.30e-12,42;UBERON:0003509,1.30e-12,42;UBERON:0004572,1.30e-12,42;UBERON:0000490,4.68e-12,148;UBERON:0010523,1.39e-11,3;UBERON:0001915,1.39e-11,3;UBERON:0001982,1.39e-11,3;UBERON:0004237,2.05e-11,10;UBERON:0004695,2.05e-11,10;UBERON:0002111,2.05e-11,10;UBERON:0004178,2.05e-11,10;UBERON:0000947,2.27e-11,21;UBERON:0010191,2.27e-11,21;UBERON:0001473,2.24e-10,8;UBERON:0004536,2.24e-10,8;UBERON:0006558,2.24e-10,8;UBERON:0004573,4.30e-10,33;UBERON:0004571,4.30e-10,33;UBERON:0003915,1.31e-09,9;UBERON:0004700,1.31e-09,9;UBERON:0001917,1.31e-09,9;UBERON:0000483,1.26e-08,306;UBERON:0000119,1.87e-08,309;UBERON:0003688,2.26e-08,6;UBERON:0002358,2.26e-08,6;UBERON:0003684,2.26e-08,6;UBERON:0001178,2.26e-08,6;UBERON:0005800,2.88e-08,2;UBERON:0001515,2.88e-08,2;UBERON:0002465,3.11e-08,10;UBERON:0001281,5.79e-08,2;UBERON:0003497,5.79e-08,2;UBERON:0003909,5.79e-08,2;UBERON:0003835,5.79e-08,2;UBERON:0001876,1.35e-07,2;UBERON:0003886,1.70e-07,54;UBERON:0001135,2.19e-07,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0,0.175669571386252,0.654895377488563,0,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.694281003215189,0.56530794192401,3.77549492588915,0.550236083880135,1.67195973229448,1.03366703667732,3.20189636418039,1.67360306382335,2.01414658554573,3.80136052859256,2.4406205754817,2.57364156242108,2.43042584364528,0.625098097988558,0.44905874525234,0.675668882899933,1.53316637465883,1.89853131913626,1.46561395144326,0,0,0,0.993943903390637,0.379891534993739,0.397227542439656,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0.453728732640084,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.927443239800615,0.117408694235822,2.16549671641611,0,1.14152491340759,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,1.15325234330131,1.02341449813341,1.12597744800525,0,0.154209693802656,0.532685175939381,0.246381468041427,0,0.348631135379878,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0,0,0,0,2.27466768141793,1.19065593693561,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0.464845549297286,2.51849877464512,1.3940745403212,0.924100740528266,1.06461206063404,0.869932992075073,1.48259375283136,0.429374660225974,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0,0.606547444719948,0,2.10629228119491,0,0,0,1.09199929126389,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,1.62328301570163,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0,0,0,0,0,0,1.9882952955326,1.1253553312841,5.00889172603077,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.552896299656123,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.539209063845416,0,1.63985112007737,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0.664653872707185,1.98595173525299,0.313932918407225,0,0,19.4144542218394,0,0,0,0.17472666824203,1.0319161948297,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0.50648636764703,0,0.0801588202515337,0,0,0,0,0,0,0.49701014226173,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.837847203816763,0.687481272035051,0,0.599037001496973,0.429226048136571,0,0.268733889946905,0.720599767084807,0,0,0,0,0.196854963029498,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.728994679896296,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.66116300871345,0.171086837884329,0,0.213574825135389,0.471612915298998,1.24271716604159,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.876336514945499,0,0.554645257684261,0.683060432355218,0,0.624902039810533,0,0,3.2937214757744,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.887130899937803,1.27437413730962,0.449803112163605,1.08684069813382,0,0.265841714557995,2.08698024724694,0,0,0,0.727394636810238,0.322231671127465,3.24823631914946,3.58286299828754,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0.899209151350433,1.41696576325585,0.798169295285756,0.41023272848151,0,0.760729777106397,0.484426936895553,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.596748666348824,0,0,0,0,0,0.147856086217045,1.01306376927592,0.781078098613847,0.620060389503552,1.07806877329642,0,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0.227662191351298,0.177404740325278,0,2.05785611324902,0.611727596791485,0.328863867814245,0,6.56265271163208,0.235479278551542,0.314231179832004,0,0,0.215927591218621,0.9555033757741,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,0.69456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| ||
|short_description=p17@RIN2 | |||
}} | }} |
Latest revision as of 16:04, 24 September 2015
Short description: | p17@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -140bp_to_ENST00000255006, NM_001242581_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.59e-33 | 36 |
endothelial cell of vascular tree | 4.11e-33 | 24 |
meso-epithelial cell | 1.39e-25 | 45 |
blood vessel endothelial cell | 2.32e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.32e-21 | 18 |
lining cell | 8.38e-21 | 58 |
barrier cell | 8.38e-21 | 58 |
mesodermal cell | 4.42e-19 | 121 |
lymphangioblast | 6.07e-14 | 6 |
endothelial cell of lymphatic vessel | 6.07e-14 | 6 |
vascular lymphangioblast | 6.07e-14 | 6 |
capillary endothelial cell | 1.39e-11 | 3 |
aortic smooth muscle cell | 2.05e-11 | 10 |
omentum preadipocyte | 6.72e-10 | 3 |
endothelial cell of artery | 1.31e-09 | 9 |
embryonic cell | 1.83e-09 | 250 |
thoracic aorta endothelial cell | 2.88e-08 | 2 |
endothelial cell of sinusoid | 5.79e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.79e-08 | 2 |
vascular associated smooth muscle cell | 7.20e-07 | 32 |