FFCP PHASE1:Hg19::chr5:133984281..133984296,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10802 | |EntrezGene=10802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10703 | |HGNC=10703 | ||
|TSSclassifier=strong | |||
|UniProt=O95486 | |UniProt=O95486 | ||
|association_with_transcript=-178bp_to_NM_001252231,NM_021982_5end | |association_with_transcript=-178bp_to_NM_001252231,NM_021982_5end | ||
|cluster_id=chr5:133984281..133984296,+ | |||
|description=CAGE_peak_3_at_SEC24A_5end | |description=CAGE_peak_3_at_SEC24A_5end | ||
|id=chr5:133984281..133984296,+ | |id=chr5:133984281..133984296,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.64e-15!76;CL:0002057!3.82e-14!42;CL:0000738!2.30e-13!140;CL:0000557!4.36e-13!71;CL:0000860!4.27e-12!45;CL:0000839!1.97e-11!70;CL:0002009!2.11e-11!65;CL:0000763!2.18e-11!112;CL:0000049!2.18e-11!112;CL:0000134!3.35e-11!358;CL:0000037!4.56e-11!172;CL:0000566!4.56e-11!172;CL:0002320!5.54e-11!365;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0000048!2.35e-10!430;CL:0000988!5.72e-10!182;CL:0002032!7.44e-10!165;CL:0000837!7.44e-10!165;CL:0002031!1.00e-09!124;CL:0000723!1.35e-09!436;CL:0000034!3.69e-09!444;CL:0000219!7.69e-09!390;CL:0002087!1.18e-08!119 | |ontology_enrichment_celltype=CL:0000766!4.64e-15!76;CL:0002057!3.82e-14!42;CL:0000738!2.30e-13!140;CL:0000557!4.36e-13!71;CL:0000860!4.27e-12!45;CL:0000839!1.97e-11!70;CL:0002009!2.11e-11!65;CL:0000763!2.18e-11!112;CL:0000049!2.18e-11!112;CL:0000134!3.35e-11!358;CL:0000037!4.56e-11!172;CL:0000566!4.56e-11!172;CL:0002320!5.54e-11!365;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0000048!2.35e-10!430;CL:0000988!5.72e-10!182;CL:0002032!7.44e-10!165;CL:0000837!7.44e-10!165;CL:0002031!1.00e-09!124;CL:0000723!1.35e-09!436;CL:0000034!3.69e-09!444;CL:0000219!7.69e-09!390;CL:0002087!1.18e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.90e-13;33!CL:0002057;3.90e-13;33!CL:0000473;1.84e-10;39!CL:0000234;1.84e-10;39!CL:0000576;2.86e-09;48!CL:0000766;9.57e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.07e-17,72;CL:0000738,1.27e-16,136;CL:0000860,6.88e-16,42;CL:0002057,6.88e-16,42;CL:0000557,2.05e-15,67;CL:0000473,1.35e-14,48;CL:0000234,1.35e-14,48;CL:0002009,7.70e-14,61;CL:0000839,1.26e-13,66;CL:0000037,2.49e-13,168;CL:0002194,5.06e-13,59;CL:0000576,5.06e-13,59;CL:0000040,5.06e-13,59;CL:0000559,5.06e-13,59;CL:0000134,5.86e-13,354;CL:0002031,1.58e-12,120;CL:0000763,1.85e-12,108;CL:0000049,1.85e-12,108;CL:0002320,1.89e-12,361;CL:0000988,3.09e-12,177;CL:0002032,6.46e-12,161;CL:0000837,6.46e-12,161;CL:0000048,1.53e-11,427;CL:0002087,1.64e-11,115;CL:0000723,1.22e-10,433;CL:0000219,2.73e-10,386;CL:0000034,4.99e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!5.68e-13!86;UBERON:0002371!1.23e-12!80;UBERON:0002405!5.78e-12!115;UBERON:0002384!3.09e-11!375;UBERON:0002390!4.96e-11!102;UBERON:0003061!4.96e-11!102;UBERON:0004765!2.10e-10!101;UBERON:0001434!2.10e-10!101;UBERON:0002193!2.58e-10!112;UBERON:0002204!4.88e-08!167 | |ontology_enrichment_uberon=UBERON:0001474!5.68e-13!86;UBERON:0002371!1.23e-12!80;UBERON:0002405!5.78e-12!115;UBERON:0002384!3.09e-11!375;UBERON:0002390!4.96e-11!102;UBERON:0003061!4.96e-11!102;UBERON:0004765!2.10e-10!101;UBERON:0001434!2.10e-10!101;UBERON:0002193!2.58e-10!112;UBERON:0002204!4.88e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.55e-15,76;UBERON:0001474,6.41e-15,82;UBERON:0002405,2.12e-14,93;UBERON:0002390,3.44e-13,98;UBERON:0003061,3.44e-13,98;UBERON:0002384,9.72e-13,371;UBERON:0002193,1.04e-12,108;UBERON:0004765,1.73e-12,90;UBERON:0001434,8.69e-12,100;UBERON:0003081,1.05e-08,203;UBERON:0002204,1.70e-08,167 | |||
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| ||
|short_description=p3@SEC24A | |short_description=p3@SEC24A | ||
}} | }} |
Latest revision as of 16:19, 24 September 2015
Short description: | p3@SEC24A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEC24A_5end |
Coexpression cluster: | NA |
Association with transcript: | -178bp_to_NM_001252231, NM_021982_5end |
EntrezGene: | SEC24A |
HGNC: | 10703 |
UniProt: | O95486 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.07e-17 | 72 |
leukocyte | 1.27e-16 | 136 |
classical monocyte | 6.88e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.88e-16 | 42 |
granulocyte monocyte progenitor cell | 2.05e-15 | 67 |
defensive cell | 1.35e-14 | 48 |
phagocyte | 1.35e-14 | 48 |
macrophage dendritic cell progenitor | 7.70e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.26e-13 | 66 |
hematopoietic stem cell | 2.49e-13 | 168 |
monopoietic cell | 5.06e-13 | 59 |
monocyte | 5.06e-13 | 59 |
monoblast | 5.06e-13 | 59 |
promonocyte | 5.06e-13 | 59 |
mesenchymal cell | 5.86e-13 | 354 |
hematopoietic lineage restricted progenitor cell | 1.58e-12 | 120 |
myeloid cell | 1.85e-12 | 108 |
common myeloid progenitor | 1.85e-12 | 108 |
connective tissue cell | 1.89e-12 | 361 |
hematopoietic cell | 3.09e-12 | 177 |
hematopoietic oligopotent progenitor cell | 6.46e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.46e-12 | 161 |
multi fate stem cell | 1.53e-11 | 427 |
nongranular leukocyte | 1.64e-11 | 115 |
somatic stem cell | 1.22e-10 | 433 |
motile cell | 2.73e-10 | 386 |
stem cell | 4.99e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.55e-15 | 76 |
bone element | 6.41e-15 | 82 |
immune system | 2.12e-14 | 93 |
hematopoietic system | 3.44e-13 | 98 |
blood island | 3.44e-13 | 98 |
connective tissue | 9.72e-13 | 371 |
hemolymphoid system | 1.04e-12 | 108 |
skeletal element | 1.73e-12 | 90 |
skeletal system | 8.69e-12 | 100 |
lateral plate mesoderm | 1.05e-08 | 203 |
musculoskeletal system | 1.70e-08 | 167 |