FFCP PHASE1:Hg19::chr9:118916382..118916386,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:118916382..118916386,+
|short_description=p19@PAPPA
|description=CAGE_peak_19_at_PAPPA_5end
|association_with_transcript=299bp_to_ENST00000328252_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt=Q13219 | |UniProt=Q13219 | ||
|association_with_transcript=299bp_to_ENST00000328252_5end | |||
|cluster_id=chr9:118916382..118916386,+ | |||
|description=CAGE_peak_19_at_PAPPA_5end | |||
|id=chr9:118916382..118916386,+ | |||
|ontology_enrichment_celltype=CL:0000192!9.82e-30!42;CL:0000514!9.82e-30!42;CL:0000359!3.05e-28!32;CL:0000187!2.61e-26!54;CL:0000680!1.17e-25!57;CL:0000056!1.17e-25!57;CL:0000355!1.17e-25!57;CL:0000055!2.48e-24!180;CL:0000393!1.11e-23!60;CL:0000211!1.11e-23!60;CL:0000183!5.35e-23!59;CL:0000222!3.34e-12!119;CL:0000057!1.56e-10!75;CL:0002539!8.05e-09!10;CL:0002494!3.23e-08!16;CL:0000048!6.11e-08!430;CL:0000723!1.70e-07!436;CL:0002595!1.82e-07!5;CL:0000034!6.25e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.71e-38;32!CL:0002592;5.23e-19;3!CL:0000192;9.12e-19;43!CL:0002589;2.18e-13;2!CL:0000187;3.25e-10;55!CL:0002539;5.12e-10;10!CL:0002541;5.72e-09;3!CL:0002580;5.72e-09;3!CL:0000393;9.54e-09;61!CL:0000211;9.54e-09;61!CL:0002594;1.92e-07;4!CL:0000222;2.42e-07;1!CL:0002568;2.42e-07;1!CL:0002591;2.42e-07;1!CL:1000306;3.73e-07;4!CL:0002547;3.73e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.49e-40,32;CL:0000192,4.07e-29,43;CL:0000514,4.07e-29,43;CL:0000187,4.34e-22,55;CL:0000680,8.70e-21,58;CL:0000056,8.70e-21,58;CL:0000355,8.70e-21,58;CL:0000393,1.30e-19,61;CL:0000211,1.30e-19,61;CL:0002592,1.90e-19,3;CL:0002589,1.25e-13,2;CL:0000222,3.97e-11,121;CL:0002539,4.68e-10,10;CL:0002541,5.29e-09,3;CL:0002580,9.66e-09,3;CL:0002594,1.95e-07,4;CL:0002568,2.66e-07,1;CL:1000306,3.63e-07,4;CL:0002547,3.63e-07,4;CL:0002591,3.84e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;9.12e-19;43!CL:0000355;1.09e-09;58!UBERON:0003124;1.00e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;5.01e-31;33!UBERON:0004571;5.01e-31;33!UBERON:0001637;3.89e-25;42!UBERON:0003509;3.89e-25;42!UBERON:0004572;3.89e-25;42!UBERON:0003498;5.23e-19;3!UBERON:0005985;5.23e-19;3!UBERON:0001621;5.23e-19;3!UBERON:0007500;1.84e-14;56!UBERON:0001981;1.84e-14;56!UBERON:0004537;1.84e-14;56!UBERON:0001529;2.18e-13;2!UBERON:0007204;2.18e-13;2!UBERON:0000055;1.32e-11;65!UBERON:0000947;4.71e-10;21!UBERON:0010191;4.71e-10;21!UBERON:0004237;5.12e-10;10!UBERON:0004695;5.12e-10;10!UBERON:0002111;5.12e-10;10!UBERON:0004178;5.12e-10;10!UBERON:0002049;4.83e-09;75!UBERON:0007798;4.83e-09;75!UBERON:0003124;5.72e-09;3!UBERON:0000920;5.72e-09;3!UBERON:0003914;2.12e-08;74!UBERON:0001310;1.92e-07;4!UBERON:0004797;3.73e-07;4!UBERON:0000415;3.73e-07;4!UBERON:0007240;3.73e-07;4!UBERON:0005742;3.73e-07;4!UBERON:0005734;3.73e-07;4!UBERON:0004664;3.73e-07;4!UBERON:0004663;3.73e-07;4 | |||
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| ||
|short_description=p19@PAPPA | |||
}} | }} |
Latest revision as of 17:54, 24 September 2015
Short description: | p19@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PAPPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 299bp_to_ENST00000328252_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.49e-40 | 32 |
smooth muscle cell | 4.07e-29 | 43 |
smooth muscle myoblast | 4.07e-29 | 43 |
muscle cell | 4.34e-22 | 55 |
muscle precursor cell | 8.70e-21 | 58 |
myoblast | 8.70e-21 | 58 |
multi-potent skeletal muscle stem cell | 8.70e-21 | 58 |
electrically responsive cell | 1.30e-19 | 61 |
electrically active cell | 1.30e-19 | 61 |
smooth muscle cell of the coronary artery | 1.90e-19 | 3 |
smooth muscle cell of the brachiocephalic vasculature | 1.25e-13 | 2 |
mesodermal cell | 3.97e-11 | 121 |
aortic smooth muscle cell | 4.68e-10 | 10 |
chorionic membrane mesenchymal stem cell | 5.29e-09 | 3 |
preadipocyte of the breast | 9.66e-09 | 3 |
smooth muscle cell of the umbilical artery | 1.95e-07 | 4 |
mesenchymal stem cell of Wharton's jelly | 2.66e-07 | 1 |
fibroblast of tunica adventitia of artery | 3.63e-07 | 4 |
fibroblast of the aortic adventitia | 3.63e-07 | 4 |
smooth muscle cell of the pulmonary artery | 3.84e-07 | 1 |