FFCP PHASE1:Hg19::chr7:99798099..99798128,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10734 | |EntrezGene=10734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11356 | |HGNC=11356 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-263bp_to_uc003uub.1_5end | |association_with_transcript=-263bp_to_uc003uub.1_5end | ||
|cluster_id=chr7:99798099..99798128,+ | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_7_at_STAG3_5end | |description=CAGE_peak_7_at_STAG3_5end | ||
|id=chr7:99798099..99798128,+ | |id=chr7:99798099..99798128,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.07e-18!24;CL:0000826!1.07e-18!24;CL:0000990!1.73e-12!8;CL:0002031!1.73e-12!124;CL:0000738!2.61e-12!140;CL:0002087!3.58e-12!119;CL:0002032!5.36e-12!165;CL:0000837!5.36e-12!165;CL:0000235!1.41e-11!10;CL:0000037!3.52e-11!172;CL:0000566!3.52e-11!172;CL:0002619!9.71e-11!3;CL:0000988!3.99e-10!182;CL:0000451!4.49e-10!10;CL:0000838!4.96e-07!52;CL:0000542!7.58e-07!53;CL:0000051!7.58e-07!53;CL:0002194!9.33e-07!63;CL:0000576!9.33e-07!63;CL:0000040!9.33e-07!63;CL:0000559!9.33e-07!63;CL:0002535!9.73e-07!2;CL:0000839!9.84e-07!70 | |ontology_enrichment_celltype=CL:0000945!1.07e-18!24;CL:0000826!1.07e-18!24;CL:0000990!1.73e-12!8;CL:0002031!1.73e-12!124;CL:0000738!2.61e-12!140;CL:0002087!3.58e-12!119;CL:0002032!5.36e-12!165;CL:0000837!5.36e-12!165;CL:0000235!1.41e-11!10;CL:0000037!3.52e-11!172;CL:0000566!3.52e-11!172;CL:0002619!9.71e-11!3;CL:0000988!3.99e-10!182;CL:0000451!4.49e-10!10;CL:0000838!4.96e-07!52;CL:0000542!7.58e-07!53;CL:0000051!7.58e-07!53;CL:0002194!9.33e-07!63;CL:0000576!9.33e-07!63;CL:0000040!9.33e-07!63;CL:0000559!9.33e-07!63;CL:0002535!9.73e-07!2;CL:0000839!9.84e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000235;8.32e-45;6!CL:0000840;1.53e-25;5!CL:0002619;7.61e-23;3!CL:0000990;2.83e-17;8!CL:0000451;2.95e-14;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.32e-45,6;CL:0000840,1.53e-25,5;CL:0001029,1.53e-25,5;CL:0002619,8.04e-23,3;CL:0002194,9.39e-22,59;CL:0000576,9.39e-22,59;CL:0000040,9.39e-22,59;CL:0000559,9.39e-22,59;CL:0002009,4.94e-21,61;CL:0000839,2.03e-19,66;CL:0000557,4.00e-19,67;CL:0000766,9.01e-18,72;CL:0000990,2.83e-17,8;CL:0000451,2.95e-14,10;CL:0002087,1.58e-13,115;CL:0002031,6.16e-13,120;CL:0000763,1.12e-11,108;CL:0000049,1.12e-11,108;CL:0000738,2.50e-11,136;CL:0002032,1.91e-09,161;CL:0000837,1.91e-09,161;CL:0000037,5.13e-09,168;CL:0000988,1.63e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.49e-07!10 | |ontology_enrichment_disease=DOID:0060058!2.49e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.33e-17;1!DOID:0070004;1.33e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.22e-17,1;DOID:0070004,1.22e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.84e-11!7;UBERON:0002106!1.83e-10!3;UBERON:0004854!1.83e-10!3;UBERON:0009034!1.83e-10!3;UBERON:0002095!1.83e-10!3;UBERON:0004782!1.83e-10!3;UBERON:0003281!1.83e-10!3;UBERON:0009664!1.83e-10!3;UBERON:0002296!1.83e-10!3;UBERON:0005602!1.83e-10!3;UBERON:0001179!1.83e-10!3;UBERON:0006293!1.83e-10!3;UBERON:0002390!2.10e-07!102;UBERON:0003061!2.10e-07!102;UBERON:0002193!3.61e-07!112;UBERON:0002405!7.38e-07!115;UBERON:0006955!9.73e-07!2;UBERON:0004801!9.73e-07!2 | |ontology_enrichment_uberon=UBERON:0004177!9.84e-11!7;UBERON:0002106!1.83e-10!3;UBERON:0004854!1.83e-10!3;UBERON:0009034!1.83e-10!3;UBERON:0002095!1.83e-10!3;UBERON:0004782!1.83e-10!3;UBERON:0003281!1.83e-10!3;UBERON:0009664!1.83e-10!3;UBERON:0002296!1.83e-10!3;UBERON:0005602!1.83e-10!3;UBERON:0001179!1.83e-10!3;UBERON:0006293!1.83e-10!3;UBERON:0002390!2.10e-07!102;UBERON:0003061!2.10e-07!102;UBERON:0002193!3.61e-07!112;UBERON:0002405!7.38e-07!115;UBERON:0006955!9.73e-07!2;UBERON:0004801!9.73e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.20e-21,76;UBERON:0002405,1.74e-20,93;UBERON:0002390,2.06e-19,98;UBERON:0003061,2.06e-19,98;UBERON:0001474,3.28e-19,82;UBERON:0002193,1.47e-17,108;UBERON:0004765,1.86e-17,90;UBERON:0001434,1.18e-15,100;UBERON:0002204,4.47e-09,167;UBERON:0003081,5.84e-09,203;UBERON:0002106,9.12e-07,3;UBERON:0004854,9.12e-07,3;UBERON:0009034,9.12e-07,3;UBERON:0002095,9.12e-07,3;UBERON:0004782,9.12e-07,3;UBERON:0003281,9.12e-07,3;UBERON:0009664,9.12e-07,3;UBERON:0002296,9.12e-07,3;UBERON:0005602,9.12e-07,3;UBERON:0001179,9.12e-07,3;UBERON:0006293,9.12e-07,3 | |||
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| ||
|short_description=p7@STAG3 | |short_description=p7@STAG3 | ||
}} | }} |
Latest revision as of 17:58, 24 September 2015
Short description: | p7@STAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_STAG3_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -263bp_to_uc003uub.1_5end |
EntrezGene: | STAG3 |
HGNC: | 11356 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.32e-45 | 6 |
immature conventional dendritic cell | 1.53e-25 | 5 |
common dendritic progenitor | 1.53e-25 | 5 |
adult endothelial progenitor cell | 8.04e-23 | 3 |
monopoietic cell | 9.39e-22 | 59 |
monocyte | 9.39e-22 | 59 |
monoblast | 9.39e-22 | 59 |
promonocyte | 9.39e-22 | 59 |
macrophage dendritic cell progenitor | 4.94e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.03e-19 | 66 |
granulocyte monocyte progenitor cell | 4.00e-19 | 67 |
myeloid leukocyte | 9.01e-18 | 72 |
conventional dendritic cell | 2.83e-17 | 8 |
dendritic cell | 2.95e-14 | 10 |
nongranular leukocyte | 1.58e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.16e-13 | 120 |
myeloid cell | 1.12e-11 | 108 |
common myeloid progenitor | 1.12e-11 | 108 |
leukocyte | 2.50e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.91e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-09 | 161 |
hematopoietic stem cell | 5.13e-09 | 168 |
hematopoietic cell | 1.63e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.20e-21 | 76 |
immune system | 1.74e-20 | 93 |
hematopoietic system | 2.06e-19 | 98 |
blood island | 2.06e-19 | 98 |
bone element | 3.28e-19 | 82 |
hemolymphoid system | 1.47e-17 | 108 |
skeletal element | 1.86e-17 | 90 |
skeletal system | 1.18e-15 | 100 |
musculoskeletal system | 4.47e-09 | 167 |
lateral plate mesoderm | 5.84e-09 | 203 |
spleen | 9.12e-07 | 3 |
gastrointestinal system mesentery | 9.12e-07 | 3 |
stomach region | 9.12e-07 | 3 |
mesentery | 9.12e-07 | 3 |
gastrointestinal system serosa | 9.12e-07 | 3 |
mesentery of stomach | 9.12e-07 | 3 |
gut mesentery | 9.12e-07 | 3 |
dorsal mesentery | 9.12e-07 | 3 |
dorsal mesogastrium | 9.12e-07 | 3 |
peritoneal cavity | 9.12e-07 | 3 |
spleen primordium | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.22e-17 | 1 |
myeloma | 1.22e-17 | 1 |