FFCP PHASE1:Hg19::chr12:7245080..7245099,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:7245080..7245099,-
|short_description=p2@C1R
|description=CAGE_peak_2_at_C1R_5end
|association_with_transcript=0bp_to_ENST00000536092,ENST00000540242,ENST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1246 | |HGNC=1246 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6Y3,F5GWL0 | |UniProt=F5H6Y3,F5GWL0 | ||
|association_with_transcript=0bp_to_ENST00000536092,ENST00000540242,ENST00000541042_5end | |||
|cluster_id=chr12:7245080..7245099,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_C1R_5end | |||
|id=chr12:7245080..7245099,- | |||
|ontology_enrichment_celltype=CL:0000055!2.83e-18!180;CL:0000057!6.85e-12!75;CL:0000680!2.43e-08!57;CL:0000056!2.43e-08!57;CL:0000355!2.43e-08!57;CL:0000183!3.52e-08!59;CL:0000187!7.47e-08!54;CL:0000393!7.14e-07!60;CL:0000211!7.14e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.32e-12,76;CL:0000680,1.06e-09,58;CL:0000056,1.06e-09,58;CL:0000355,1.06e-09,58;CL:0000187,3.71e-09,55;CL:0000393,8.83e-08,61;CL:0000211,8.83e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!9.33e-20!347;UBERON:0000475!2.53e-19!365;UBERON:0003104!4.45e-13!238;UBERON:0009142!4.45e-13!238;UBERON:0002100!1.84e-12!216;UBERON:0005256!2.50e-12!143;UBERON:0000477!4.87e-12!286;UBERON:0000468!1.59e-11!659;UBERON:0002385!1.30e-09!63;UBERON:0001015!1.30e-09!63;UBERON:0000383!1.30e-09!63;UBERON:0001007!2.65e-09!155;UBERON:0001555!2.65e-09!155;UBERON:0007026!2.65e-09!155;UBERON:0007023!4.76e-09!115;UBERON:0001134!5.19e-09!61;UBERON:0002036!5.19e-09!61;UBERON:0003082!5.19e-09!61;UBERON:0000914!2.03e-08!83;UBERON:0002329!2.03e-08!83;UBERON:0003077!2.03e-08!83;UBERON:0003059!2.03e-08!83;UBERON:0007282!2.03e-08!83;UBERON:0009618!2.03e-08!83;UBERON:0007285!2.03e-08!83;UBERON:0000480!3.01e-08!626;UBERON:0000467!3.03e-08!625;UBERON:0004111!4.22e-08!241;UBERON:0004119!4.95e-08!169;UBERON:0000925!4.95e-08!169;UBERON:0006595!4.95e-08!169;UBERON:0000483!7.56e-08!309;UBERON:0000119!9.77e-08!312;UBERON:0007100!1.01e-07!27;UBERON:0003102!1.06e-07!95;UBERON:0004290!1.27e-07!70;UBERON:0000062!1.42e-07!511;UBERON:0001048!2.42e-07!168;UBERON:0004921!4.23e-07!129;UBERON:0004185!4.23e-07!129;UBERON:0000948!4.72e-07!24;UBERON:0005498!4.72e-07!24;UBERON:0004140!4.72e-07!24;UBERON:0009881!4.72e-07!24;UBERON:0004141!4.72e-07!24;UBERON:0003084!4.72e-07!24;UBERON:0007005!4.72e-07!24;UBERON:0004139!4.72e-07!24;UBERON:0004291!4.72e-07!24;UBERON:0000490!7.53e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.37e-08;25!UBERON:0000948;2.01e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.35e-14,160;UBERON:0009142,5.35e-14,160;UBERON:0005256,2.33e-13,122;UBERON:0002385,3.90e-11,64;UBERON:0001015,3.90e-11,64;UBERON:0000383,3.90e-11,64;UBERON:0001134,1.87e-10,62;UBERON:0002036,1.87e-10,62;UBERON:0003082,1.87e-10,62;UBERON:0002100,1.88e-09,199;UBERON:0001007,3.93e-09,145;UBERON:0001555,3.93e-09,145;UBERON:0007026,3.93e-09,145;UBERON:0007524,5.65e-09,73;UBERON:0002329,1.37e-08,71;UBERON:0003059,1.37e-08,71;UBERON:0007282,1.37e-08,71;UBERON:0004290,1.37e-08,71;UBERON:0009618,1.37e-08,71;UBERON:0007100,1.43e-08,27;UBERON:0003077,1.45e-08,72;UBERON:0007285,1.45e-08,72;UBERON:0000948,7.88e-08,24;UBERON:0005498,7.88e-08,24;UBERON:0004140,7.88e-08,24;UBERON:0009881,7.88e-08,24;UBERON:0004141,7.88e-08,24;UBERON:0003084,7.88e-08,24;UBERON:0007005,7.88e-08,24;UBERON:0004139,7.88e-08,24;UBERON:0004291,7.88e-08,24;UBERON:0001048,9.11e-08,160;UBERON:0007023,9.45e-08,114;UBERON:0004119,1.56e-07,160;UBERON:0000925,1.56e-07,160;UBERON:0006595,1.56e-07,160;UBERON:0007503,2.10e-07,78;UBERON:0000486,2.26e-07,83;UBERON:0004921,4.16e-07,118 | |||
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| ||
|short_description=p2@C1R | |||
}} | }} |
Latest revision as of 18:01, 24 September 2015
Short description: | p2@C1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1R_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000536092, ENST00000540242, ENST00000541042_5end |
EntrezGene: | NA |
HGNC: | 1246 |
UniProt: | F5H6Y3F5GWL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.32e-12 | 76 |
muscle precursor cell | 1.06e-09 | 58 |
myoblast | 1.06e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-09 | 58 |
muscle cell | 3.71e-09 | 55 |
electrically responsive cell | 8.83e-08 | 61 |
electrically active cell | 8.83e-08 | 61 |