FFCP PHASE1:Hg19::chr5:134734791..134734802,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9555 | |EntrezGene=9555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4740 | |HGNC=4740 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_ENST00000508785_5end | |association_with_transcript=64bp_to_ENST00000508785_5end | ||
|cluster_id=chr5:134734791..134734802,- | |||
|description=CAGE_peak_6_at_H2AFY_5end | |description=CAGE_peak_6_at_H2AFY_5end | ||
|id=chr5:134734791..134734802,- | |id=chr5:134734791..134734802,- | ||
|ontology_enrichment_celltype=CL:0000763!2.93e-22!112;CL:0000049!2.93e-22!112;CL:0000037!1.83e-16!172;CL:0000566!1.83e-16!172;CL:0002009!2.85e-16!65;CL:0002032!8.36e-16!165;CL:0000837!8.36e-16!165;CL:0002194!2.46e-15!63;CL:0000576!2.46e-15!63;CL:0000040!2.46e-15!63;CL:0000559!2.46e-15!63;CL:0000766!2.72e-15!76;CL:0000557!2.94e-15!71;CL:0000988!3.96e-15!182;CL:0000839!1.37e-14!70;CL:0000738!1.71e-09!140;CL:0002087!3.99e-09!119;CL:0002031!4.02e-09!124;CL:0000860!1.17e-08!45;CL:0002057!1.24e-07!42 | |ontology_enrichment_celltype=CL:0000763!2.93e-22!112;CL:0000049!2.93e-22!112;CL:0000037!1.83e-16!172;CL:0000566!1.83e-16!172;CL:0002009!2.85e-16!65;CL:0002032!8.36e-16!165;CL:0000837!8.36e-16!165;CL:0002194!2.46e-15!63;CL:0000576!2.46e-15!63;CL:0000040!2.46e-15!63;CL:0000559!2.46e-15!63;CL:0000766!2.72e-15!76;CL:0000557!2.94e-15!71;CL:0000988!3.96e-15!182;CL:0000839!1.37e-14!70;CL:0000738!1.71e-09!140;CL:0002087!3.99e-09!119;CL:0002031!4.02e-09!124;CL:0000860!1.17e-08!45;CL:0002057!1.24e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000763;2.93e-10;100!CL:0000473;3.79e-10;39!CL:0000234;3.79e-10;39!CL:0000235;4.56e-09;6!CL:0000576;1.50e-07;48!CL:0000766;6.44e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.32e-31,108;CL:0000049,4.32e-31,108;CL:0000037,1.42e-24,168;CL:0000988,6.79e-24,177;CL:0002032,1.80e-23,161;CL:0000837,1.80e-23,161;CL:0002009,5.19e-19,61;CL:0000557,1.33e-17,67;CL:0000766,1.47e-17,72;CL:0002194,2.18e-17,59;CL:0000576,2.18e-17,59;CL:0000040,2.18e-17,59;CL:0000559,2.18e-17,59;CL:0000839,1.75e-16,66;CL:0000738,9.97e-13,136;CL:0002031,2.03e-11,120;CL:0002087,3.94e-11,115;CL:0000473,3.46e-10,48;CL:0000234,3.46e-10,48;CL:0000235,2.56e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000049;4.29e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!3.32e-13!51;DOID:0060083!3.32e-13!51;DOID:1240!1.11e-11!39;DOID:162!1.79e-11!235;DOID:14566!9.85e-11!239;DOID:8692!1.21e-08!31;DOID:0050686!1.76e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.30e-14;39!DOID:8692;1.81e-13;31!DOID:2531;7.03e-13;51!DOID:0060083;7.03e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.29e-20,51;DOID:0060083,1.29e-20,51;DOID:1240,7.25e-19,39;DOID:8692,2.09e-14,31;DOID:0050686,5.07e-11,137;DOID:162,9.67e-10,235;DOID:14566,3.73e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.30e-14!80;UBERON:0001474!4.38e-12!86;UBERON:0002390!3.22e-11!102;UBERON:0003061!3.22e-11!102;UBERON:0002193!9.93e-10!112;UBERON:0002405!1.50e-09!115;UBERON:0004765!1.71e-09!101;UBERON:0001434!1.71e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.10e-17,76;UBERON:0001474,6.24e-16,82;UBERON:0004765,2.11e-13,90;UBERON:0002390,3.41e-13,98;UBERON:0003061,3.41e-13,98;UBERON:0002405,8.01e-13,93;UBERON:0001434,7.28e-11,100;UBERON:0002193,8.16e-11,108 | |||
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| ||
|short_description=p6@H2AFY | |short_description=p6@H2AFY | ||
}} | }} |
Latest revision as of 18:02, 24 September 2015
Short description: | p6@H2AFY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_H2AFY_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000508785_5end |
EntrezGene: | H2AFY |
HGNC: | 4740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.32e-31 | 108 |
common myeloid progenitor | 4.32e-31 | 108 |
hematopoietic stem cell | 1.42e-24 | 168 |
hematopoietic cell | 6.79e-24 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-23 | 161 |
macrophage dendritic cell progenitor | 5.19e-19 | 61 |
granulocyte monocyte progenitor cell | 1.33e-17 | 67 |
myeloid leukocyte | 1.47e-17 | 72 |
monopoietic cell | 2.18e-17 | 59 |
monocyte | 2.18e-17 | 59 |
monoblast | 2.18e-17 | 59 |
promonocyte | 2.18e-17 | 59 |
myeloid lineage restricted progenitor cell | 1.75e-16 | 66 |
leukocyte | 9.97e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.03e-11 | 120 |
nongranular leukocyte | 3.94e-11 | 115 |
defensive cell | 3.46e-10 | 48 |
phagocyte | 3.46e-10 | 48 |
macrophage | 2.56e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.10e-17 | 76 |
bone element | 6.24e-16 | 82 |
skeletal element | 2.11e-13 | 90 |
hematopoietic system | 3.41e-13 | 98 |
blood island | 3.41e-13 | 98 |
immune system | 8.01e-13 | 93 |
skeletal system | 7.28e-11 | 100 |
hemolymphoid system | 8.16e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.29e-20 | 51 |
immune system cancer | 1.29e-20 | 51 |
leukemia | 7.25e-19 | 39 |
myeloid leukemia | 2.09e-14 | 31 |
organ system cancer | 5.07e-11 | 137 |
cancer | 9.67e-10 | 235 |
disease of cellular proliferation | 3.73e-09 | 239 |