FFCP PHASE1:Hg19::chr9:120466650..120466659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7099 | |EntrezGene=7099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11850 | |HGNC=11850 | ||
|TSSclassifier=strong | |||
|UniProt=O00206 | |UniProt=O00206 | ||
|association_with_transcript=0bp_to_ENST00000355622_5end | |association_with_transcript=0bp_to_ENST00000355622_5end | ||
|cluster_id=chr9:120466650..120466659,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_6_at_TLR4_5end | |description=CAGE_peak_6_at_TLR4_5end | ||
|id=chr9:120466650..120466659,+ | |id=chr9:120466650..120466659,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.03e-35!76;CL:0002194!1.94e-32!63;CL:0000576!1.94e-32!63;CL:0000040!1.94e-32!63;CL:0000559!1.94e-32!63;CL:0002009!5.29e-31!65;CL:0002057!1.94e-30!42;CL:0000557!2.58e-29!71;CL:0000839!2.10e-28!70;CL:0000860!3.29e-27!45;CL:0000763!2.86e-22!112;CL:0000049!2.86e-22!112;CL:0000738!8.99e-16!140;CL:0002087!8.09e-15!119;CL:0000037!1.81e-12!172;CL:0000566!1.81e-12!172;CL:0002032!6.62e-12!165;CL:0000837!6.62e-12!165;CL:0002031!8.79e-12!124;CL:0000988!1.26e-11!182;CL:0000115!7.14e-10!35;CL:0002139!1.13e-09!24;CL:0002393!4.68e-07!9;CL:0002397!4.68e-07!9 | |ontology_enrichment_celltype=CL:0000766!2.03e-35!76;CL:0002194!1.94e-32!63;CL:0000576!1.94e-32!63;CL:0000040!1.94e-32!63;CL:0000559!1.94e-32!63;CL:0002009!5.29e-31!65;CL:0002057!1.94e-30!42;CL:0000557!2.58e-29!71;CL:0000839!2.10e-28!70;CL:0000860!3.29e-27!45;CL:0000763!2.86e-22!112;CL:0000049!2.86e-22!112;CL:0000738!8.99e-16!140;CL:0002087!8.09e-15!119;CL:0000037!1.81e-12!172;CL:0000566!1.81e-12!172;CL:0002032!6.62e-12!165;CL:0000837!6.62e-12!165;CL:0002031!8.79e-12!124;CL:0000988!1.26e-11!182;CL:0000115!7.14e-10!35;CL:0002139!1.13e-09!24;CL:0002393!4.68e-07!9;CL:0002397!4.68e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.70e-33;33!CL:0002057;3.70e-33;33!CL:0000473;1.96e-32;39!CL:0000234;1.96e-32;39!CL:0000576;4.27e-29;48!CL:0000766;3.58e-23;69!CL:0002139;8.78e-12;24!CL:0000763;1.05e-11;100!CL:0000115;1.47e-10;36!CL:0000094;9.01e-09;8!CL:0000081;2.52e-08;11!CL:0000071;1.43e-07;18!CL:0000738;4.42e-07;136!CL:0000235;4.46e-07;6!CL:0002393;4.49e-07;6!CL:0002397;4.49e-07;6!CL:0002087;5.52e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.45e-53,72;CL:0000473,9.53e-51,48;CL:0000234,9.53e-51,48;CL:0002194,9.84e-50,59;CL:0000576,9.84e-50,59;CL:0000040,9.84e-50,59;CL:0000559,9.84e-50,59;CL:0002009,2.47e-47,61;CL:0000860,6.71e-45,42;CL:0002057,6.71e-45,42;CL:0000557,3.99e-44,67;CL:0000839,1.03e-43,66;CL:0000763,8.87e-35,108;CL:0000049,8.87e-35,108;CL:0000738,2.45e-25,136;CL:0002087,5.60e-24,115;CL:0000037,1.85e-20,168;CL:0002032,5.10e-20,161;CL:0000837,5.10e-20,161;CL:0002031,2.84e-19,120;CL:0000988,3.04e-19,177;CL:0000115,3.69e-13,36;CL:0002139,3.13e-12,24;CL:0002393,8.50e-10,9;CL:0002397,8.50e-10,9;CL:0002078,8.33e-09,45;CL:0000094,9.19e-09,8;CL:0000081,3.14e-08,11;CL:0000071,6.35e-08,18;CL:0002546,6.35e-08,18;CL:0000235,4.24e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-32;42!CL:0000049;1.00e-10;108!CL:0002546;1.43e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.25e-32!112;UBERON:0002390!3.47e-30!102;UBERON:0003061!3.47e-30!102;UBERON:0002371!2.90e-27!80;UBERON:0003081!9.10e-27!216;UBERON:0001474!9.36e-25!86;UBERON:0002405!1.13e-22!115;UBERON:0004765!5.34e-18!101;UBERON:0001434!5.34e-18!101;UBERON:0007023!6.73e-14!115;UBERON:0001009!5.05e-13!113;UBERON:0004535!1.59e-12!110;UBERON:0002204!1.76e-11!167;UBERON:0002049!3.59e-08!79;UBERON:0007798!3.59e-08!79;UBERON:0000055!3.53e-07!69;UBERON:0000926!7.73e-07!448;UBERON:0004120!7.73e-07!448;UBERON:0006603!7.73e-07!448;UBERON:0004872!8.67e-07!84 | |ontology_enrichment_uberon=UBERON:0002193!1.25e-32!112;UBERON:0002390!3.47e-30!102;UBERON:0003061!3.47e-30!102;UBERON:0002371!2.90e-27!80;UBERON:0003081!9.10e-27!216;UBERON:0001474!9.36e-25!86;UBERON:0002405!1.13e-22!115;UBERON:0004765!5.34e-18!101;UBERON:0001434!5.34e-18!101;UBERON:0007023!6.73e-14!115;UBERON:0001009!5.05e-13!113;UBERON:0004535!1.59e-12!110;UBERON:0002204!1.76e-11!167;UBERON:0002049!3.59e-08!79;UBERON:0007798!3.59e-08!79;UBERON:0000055!3.53e-07!69;UBERON:0000926!7.73e-07!448;UBERON:0004120!7.73e-07!448;UBERON:0006603!7.73e-07!448;UBERON:0004872!8.67e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.43e-07;18!UBERON:0001986;1.43e-07;18!UBERON:0004852;1.43e-07;18!UBERON:0000178;1.88e-07;15!UBERON:0000179;1.88e-07;15!UBERON:0000463;1.88e-07;15 | |||
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| ||
|short_description=p6@TLR4 | |short_description=p6@TLR4 | ||
}} | }} |
Latest revision as of 18:51, 24 September 2015
Short description: | p6@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TLR4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000355622_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | O00206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.16e-47 | 108 |
hematopoietic system | 1.53e-43 | 98 |
blood island | 1.53e-43 | 98 |
lateral plate mesoderm | 3.17e-42 | 203 |
immune system | 7.57e-40 | 93 |
bone marrow | 8.51e-39 | 76 |
bone element | 2.14e-35 | 82 |
skeletal element | 4.70e-31 | 90 |
skeletal system | 1.31e-25 | 100 |
mesoderm | 1.15e-22 | 315 |
mesoderm-derived structure | 1.15e-22 | 315 |
presumptive mesoderm | 1.15e-22 | 315 |
musculoskeletal system | 7.26e-14 | 167 |
cardiovascular system | 1.13e-13 | 109 |
circulatory system | 1.58e-13 | 112 |
blood vessel endothelium | 6.35e-08 | 18 |
endothelium | 6.35e-08 | 18 |
cardiovascular system endothelium | 6.35e-08 | 18 |
vessel | 7.51e-08 | 68 |
blood | 1.17e-07 | 15 |
haemolymphatic fluid | 1.17e-07 | 15 |
organism substance | 1.17e-07 | 15 |
vasculature | 1.33e-07 | 78 |
vascular system | 1.33e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 3.75e-07 | 83 |