FFCP PHASE1:Hg19::chr20:22566120..22566136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3170 | |EntrezGene=3170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5022 | |HGNC=5022 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y261 | |UniProt=Q9Y261 | ||
|association_with_transcript=-19bp_to_NM_153675,uc002wsn.2_5end | |association_with_transcript=-19bp_to_NM_153675,uc002wsn.2_5end | ||
|cluster_id=chr20:22566120..22566136,- | |||
|coexpression_cluster_id=C703 | |coexpression_cluster_id=C703 | ||
|description=CAGE_peak_4_at_FOXA2_5end | |description=CAGE_peak_4_at_FOXA2_5end | ||
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|ontology_enrichment_celltype=CL:0000223!3.75e-24!59;CL:0002076!2.71e-15!43;CL:0000066!5.50e-15!254;CL:0002368!5.84e-15!13;CL:0000181!2.16e-14!12;CL:0000417!2.16e-14!12;CL:0000668!2.16e-14!12;CL:0000414!2.16e-14!12;CL:0000412!2.16e-14!12;CL:0000182!2.16e-14!12;CL:0000082!1.50e-07!19;CL:0002202!2.82e-07!9;CL:0002632!2.82e-07!9 | |ontology_enrichment_celltype=CL:0000223!3.75e-24!59;CL:0002076!2.71e-15!43;CL:0000066!5.50e-15!254;CL:0002368!5.84e-15!13;CL:0000181!2.16e-14!12;CL:0000417!2.16e-14!12;CL:0000668!2.16e-14!12;CL:0000414!2.16e-14!12;CL:0000412!2.16e-14!12;CL:0000182!2.16e-14!12;CL:0000082!1.50e-07!19;CL:0002202!2.82e-07!9;CL:0002632!2.82e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.72e-22;12!CL:0002368;5.57e-14;13!CL:0000307;1.11e-10;3!CL:0002076;5.35e-08;42!CL:0002202;7.02e-08;9!CL:0002632;7.02e-08;9 | |ontology_enrichment_celltype_v019=CL:0000182;1.72e-22;12!CL:0002368;5.57e-14;13!CL:0000307;1.11e-10;3!CL:0002076;5.35e-08;42!CL:0002202;7.02e-08;9!CL:0002632;7.02e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.57e-22,58;CL:0000182,1.69e-22,12;CL:0002368,5.06e-14,13;CL:0000068,1.08e-10,3;CL:0000069,1.08e-10,3;CL:0000307,1.08e-10,3;CL:0000377,1.08e-10,3;CL:0002076,4.48e-10,42;CL:0002202,7.02e-08,9;CL:0002632,7.02e-08,9;CL:0000066,4.60e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.66e-36;13!UBERON:0004161;7.51e-33;11!UBERON:0001041;2.31e-23;30!CL:0000223;2.18e-15;58!UBERON:0003104;5.75e-11;31!CL:0000377;1.11e-10;3!UBERON:0006242;1.65e-08;1 | |ontology_enrichment_development_v019=UBERON:0009497;3.66e-36;13!UBERON:0004161;7.51e-33;11!UBERON:0001041;2.31e-23;30!CL:0000223;2.18e-15;58!UBERON:0003104;5.75e-11;31!CL:0000377;1.11e-10;3!UBERON:0006242;1.65e-08;1 | ||
|ontology_enrichment_disease=DOID:305!7.70e-12!106;DOID:3119!1.33e-08!14;DOID:0050687!1.68e-08!143;DOID:0050615!4.92e-07!16 | |ontology_enrichment_disease=DOID:305!7.70e-12!106;DOID:3119!1.33e-08!14;DOID:0050687!1.68e-08!143;DOID:0050615!4.92e-07!16 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0009497,9.66e-29,25;UBERON:0000015,9.66e-29,25;UBERON:0002423,9.66e-29,25;UBERON:0006235,9.66e-29,25;UBERON:0004161,9.66e-29,25;UBERON:0008835,8.36e-27,22;UBERON:0003894,8.36e-27,22;UBERON:0009854,1.40e-25,23;UBERON:0002107,1.14e-24,19;UBERON:0006925,1.14e-24,19;UBERON:0008836,1.14e-24,19;UBERON:0007499,2.00e-23,25;UBERON:0009856,1.80e-22,26;UBERON:0005911,3.21e-20,82;UBERON:0001041,5.55e-19,87;UBERON:0003929,6.73e-18,54;UBERON:0004921,6.85e-17,118;UBERON:0004119,1.52e-16,160;UBERON:0000925,1.52e-16,160;UBERON:0006595,1.52e-16,160;UBERON:0005177,8.52e-16,101;UBERON:0001007,7.80e-15,145;UBERON:0001555,7.80e-15,145;UBERON:0007026,7.80e-15,145;UBERON:0002365,1.07e-14,31;UBERON:0002330,1.07e-14,31;UBERON:0009569,6.00e-14,112;UBERON:0002368,6.84e-13,35;UBERON:0005172,2.55e-12,54;UBERON:0005173,2.55e-12,54;UBERON:0002417,6.37e-11,60;UBERON:0000916,6.37e-11,60;UBERON:0001048,3.01e-10,160;UBERON:0000949,8.90e-10,45;UBERON:0002530,5.01e-09,59;UBERON:0002100,1.06e-08,199;UBERON:0002171,1.78e-08,1;UBERON:0006518,1.78e-08,1;UBERON:0008949,1.78e-08,1;UBERON:0000101,1.78e-08,1;UBERON:0002167,1.78e-08,1;UBERON:0000065,1.44e-07,54;UBERON:0011216,3.07e-07,223;UBERON:0005178,3.23e-07,34;UBERON:0002224,3.23e-07,34;UBERON:0005181,5.36e-07,35 | |||
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| ||
|short_description=p4@FOXA2 | |short_description=p4@FOXA2 | ||
}} | }} |
Latest revision as of 19:06, 24 September 2015
Short description: | p4@FOXA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXA2_5end |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | -19bp_to_NM_153675, uc002wsn.2_5end |
EntrezGene: | FOXA2 |
HGNC: | 5022 |
UniProt: | Q9Y261 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.57e-22 | 58 |
hepatocyte | 1.69e-22 | 12 |
respiratory epithelial cell | 5.06e-14 | 13 |
duct epithelial cell | 1.08e-10 | 3 |
branched duct epithelial cell | 1.08e-10 | 3 |
tracheal epithelial cell | 1.08e-10 | 3 |
tracheoblast | 1.08e-10 | 3 |
endo-epithelial cell | 4.48e-10 | 42 |
epithelial cell of tracheobronchial tree | 7.02e-08 | 9 |
epithelial cell of lower respiratory tract | 7.02e-08 | 9 |
epithelial cell | 4.60e-07 | 253 |