FFCP PHASE1:Hg19::chr5:135382984..135383005,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:135382984..135383005,+
|short_description=p14@TGFBI
|description=CAGE_peak_14_at_TGFBI_5end
|association_with_transcript=-7bp_to_ENST00000508767_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000508767_5end | |||
|cluster_id=chr5:135382984..135383005,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_14_at_TGFBI_5end | |||
|id=chr5:135382984..135383005,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.68e-27!180;CL:0000680!6.26e-18!57;CL:0000056!6.26e-18!57;CL:0000355!6.26e-18!57;CL:0000187!3.85e-16!54;CL:0000183!1.66e-15!59;CL:0000192!2.03e-14!42;CL:0000514!2.03e-14!42;CL:0000048!2.84e-14!430;CL:0002371!4.98e-14!591;CL:0000723!5.99e-14!436;CL:0000057!6.43e-14!75;CL:0000393!1.39e-13!60;CL:0000211!1.39e-13!60;CL:0000144!2.49e-13!625;CL:0000034!6.74e-13!444;CL:0000359!1.05e-12!32;CL:0000548!7.51e-12!679;CL:0000004!7.51e-12!679;CL:0000255!7.51e-12!679;CL:0000012!2.57e-11!682;CL:0002334!3.06e-08!12;CL:0002620!4.98e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.39e-12;12!CL:0000359;8.08e-10;32!CL:0000499;6.98e-08;28!CL:0000192;7.74e-08;43!CL:0000187;1.27e-07;55!CL:0002620;1.47e-07;23!CL:0000327;2.48e-07;15!CL:0000153;3.59e-07;9!CL:0000447;3.59e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.28e-16,76;CL:0000048,4.33e-15,427;CL:0000680,1.85e-14,58;CL:0000056,1.85e-14,58;CL:0000355,1.85e-14,58;CL:0000723,2.39e-14,433;CL:0000034,2.12e-13,441;CL:0000187,3.09e-12,55;CL:0002334,4.06e-12,12;CL:0000192,1.77e-10,43;CL:0000514,1.77e-10,43;CL:0000359,1.79e-10,32;CL:0000393,4.56e-10,61;CL:0000211,4.56e-10,61;CL:0000499,6.54e-08,28;CL:0002620,1.87e-07,23;CL:0000327,2.01e-07,15;CL:0000153,3.47e-07,9;CL:0000447,3.47e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;7.28e-08;58!CL:0000514;7.74e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.01e-17!61;UBERON:0002036!1.01e-17!61;UBERON:0003082!1.01e-17!61;UBERON:0002385!1.70e-17!63;UBERON:0001015!1.70e-17!63;UBERON:0000383!1.70e-17!63;UBERON:0002204!1.52e-15!167;UBERON:0004290!2.26e-15!70;UBERON:0000486!2.38e-15!82;UBERON:0000914!3.48e-14!83;UBERON:0002329!3.48e-14!83;UBERON:0003077!3.48e-14!83;UBERON:0003059!3.48e-14!83;UBERON:0007282!3.48e-14!83;UBERON:0009618!3.48e-14!83;UBERON:0007285!3.48e-14!83;UBERON:0005256!1.64e-12!143;UBERON:0000490!1.79e-10!138;UBERON:0001637!9.79e-10!42;UBERON:0003509!9.79e-10!42;UBERON:0004572!9.79e-10!42;UBERON:0002100!1.06e-09!216;UBERON:0004573!1.25e-09!33;UBERON:0004571!1.25e-09!33;UBERON:0000926!8.38e-09!448;UBERON:0004120!8.38e-09!448;UBERON:0006603!8.38e-09!448;UBERON:0000468!6.87e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.89e-08;9!UBERON:0000042;1.89e-08;9!UBERON:0004573;2.78e-08;33!UBERON:0004571;2.78e-08;33!UBERON:0002385;6.72e-08;31!UBERON:0001015;6.72e-08;31!UBERON:0000383;6.72e-08;31!UBERON:0003688;1.80e-07;6!UBERON:0002358;1.80e-07;6!UBERON:0003684;1.80e-07;6!UBERON:0001178;1.80e-07;6!UBERON:0001637;5.62e-07;42!UBERON:0003509;5.62e-07;42!UBERON:0004572;5.62e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.05e-14,62;UBERON:0002036,9.05e-14,62;UBERON:0003082,9.05e-14,62;UBERON:0002385,5.58e-13,64;UBERON:0001015,5.58e-13,64;UBERON:0000383,5.58e-13,64;UBERON:0000486,3.42e-11,83;UBERON:0002329,1.32e-10,71;UBERON:0003059,1.32e-10,71;UBERON:0007282,1.32e-10,71;UBERON:0004290,1.32e-10,71;UBERON:0009618,1.32e-10,71;UBERON:0003077,2.61e-10,72;UBERON:0007285,2.61e-10,72;UBERON:0007524,5.05e-10,73;UBERON:0001637,2.50e-09,42;UBERON:0003509,2.50e-09,42;UBERON:0004572,2.50e-09,42;UBERON:0002204,3.45e-09,167;UBERON:0004573,3.47e-09,33;UBERON:0004571,3.47e-09,33;UBERON:0005256,5.20e-09,122;UBERON:0007503,1.02e-08,78;UBERON:0002100,2.32e-07,199;UBERON:0003688,2.58e-07,6;UBERON:0002358,2.58e-07,6;UBERON:0003684,2.58e-07,6;UBERON:0001178,2.58e-07,6;UBERON:0000490,4.79e-07,148;UBERON:0003104,6.47e-07,160;UBERON:0009142,6.47e-07,160;UBERON:0002384,6.98e-07,371 | |||
|phase1_expression=2.72517568905835,7.27941781229343,2.11431606143957,3.00219895059391,4.46961094427288,5.23403114460221,0,0,0,1.22866968250754,0,3.49506195408276,2.37390280405608,0.37129905888014,0.331397375727916,8.74022690387308,6.02694528023977,5.11217063271161,1.46379839637152,4.062994916534,3.06001036866379,3.44800193625897,0,1.36874425072884,0.376627918784408,0,0,0,0.786728553697808,0,0.309632246632152,0,1.204823675113,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0.223915474239924,0,0,0.726991193897824,1.51150377475524,0.485168122375632,0.929716147622738,2.05583944010913,1.23882548358041,0.863077176966451,1.0246428261164,1.89185783910868,0.344745680736619,1.29096936716765,0,1.50593871634084,3.0019676506363,0.674170453335254,1.22433556948361,0.641858054152187,0,1.31940520074686,2.79249120670285,2.55734850319616,0.580418477257168,0.56738522469114,0,1.7587406567972,0.521482918420201,1.52032191293582,0.605399502633369,0.368277635987565,0.632924774881769,0.422510572623884,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.255725123687061,10.4817354191524,6.51739283826656,10.2841028462185,8.74814541756209,12.6525066278685,1.79616152611729,4.43458794925128,1.31752178539689,0.130979075497713,0,0,0.324547393654683,1.39303789839414,3.19099105245276,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,11.4303548889923,3.92554586160197,0.662045904066094,8.03142538096678,1.77334191099179,0.560677600142307,4.2699598291882,6.90669135568048,0.622422070799533,0.269421344139376,0.817309515567294,1.51357427644931,1.15235184896,0.234321431833797,0.624320153660641,0,0.149448680551801,0,0.323745888736263,0.140450806702248,0,0.122834317311768,0.309977343527296,0,1.23633464639278,0,1.43723628363248,0,0.125118519871964,0,0,1.83892677479412,1.95309476578576,0.453728732640084,13.6336123123535,3.20336083227851,2.33125091275518,9.00273288253207,2.16410311400722,11.0785432219621,2.79175284497385,9.11392194102838,8.86676746966907,15.398460228891,3.68199594569197,0.80823028409406,28.7557769938458,5.13835700960965,1.18692414617341,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,16.1709582524096,1.26755034821831,0,0,0,0,2.40194934417936,0.658501712451753,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.70445216541493,0.144366447761074,0,0,0,0,1.72351904261178,0,1.18904929830983,0,3.86358894857377,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,1.74384027533312,0.07333828582095,0.387815147273333,0,4.22651376278,0.26593811658487,0,0.257207374262142,0,0,2.85955987316295,3.7983512377401,0.823240336780769,1.62868092146868,4.26470338491055,1.58390374586686,0.602878754119172,0,0.699810938274399,0,0.502257091432126,0,0.479249710983165,1.14861935834114,0,3.76431397335706,5.13690806375959,7.87868238255541,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,1.50051156317903,0.271265023699736,5.19927153827018,3.03329280955175,0.788512075169673,0,0,2.27407504055985,2.0694614258501,1.32845119707087,2.94990669666725,0.695068915744663,0.587403472388222,0.343143423810856,0,0.647142602455851,0.106727557803444,0.606255142892519,1.66435439510497,3.32629322662648,5.95458738765064,4.75732117192994,15.9976253826852,11.2762451345017,4.09365799253363,6.11244900345709,1.48418066444991,2.46735510084249,2.30830242907065,1.31403449622095,5.71179872101983,1.85936605535935,0.241718899183244,3.60911646545913,0.0920809889358963,1.37777337797528,3.64182336013434,2.22911505431021,0,0.15403067420883,0,1.46139224653261,0.633309773357254,0,0.170093705276516,0,0,0.270946437543853,0,0,0,1.11937377361089,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,3.21367859688319,0.48335359146061,2.15668063960502,2.45605879561807,0.689182862422653,4.72649077420404,2.46528379654188,1.70453254832202,1.24644849905432,1.98341898433174,0.768760269460425,0.638063562472921,0.30347334256665,0.464845549297286,14.7961803010401,0.6970372701606,0.924100740528266,1.59691809095107,0.869932992075073,4.633105477598,2.57624796135584,0.744316738719335,0,0.762520775695299,0.255897791311334,0,2.22742273548156,3.92474320099615,1.2591072030832,3.84351841630477,1.64937363283961,0.606547444719948,4.75530963519025,4.21258456238981,0.975267478179181,1.21856744815642,6.33900880540533,0.545999645631943,6.08043357400965,2.26016233240486,6.61638412255349,5.97095077717098,3.5076070820301,1.15755106853338,0.655894752046633,1.62328301570163,2.478587984798,2.53526042279017,0.143411352204052,0.392996164052485,0.7133421029625,0,14.1442115649435,6.91519275215794,0,0,0.384888450902048,0,1.08890984861323,0.0941438007767792,1.29151611801369,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| ||
|short_description=p14@TGFBI | |||
}} | }} |
Latest revision as of 19:26, 24 September 2015
Short description: | p14@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | -7bp_to_ENST00000508767_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.28e-16 | 76 |
multi fate stem cell | 4.33e-15 | 427 |
muscle precursor cell | 1.85e-14 | 58 |
myoblast | 1.85e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-14 | 58 |
somatic stem cell | 2.39e-14 | 433 |
stem cell | 2.12e-13 | 441 |
muscle cell | 3.09e-12 | 55 |
preadipocyte | 4.06e-12 | 12 |
smooth muscle cell | 1.77e-10 | 43 |
smooth muscle myoblast | 1.77e-10 | 43 |
vascular associated smooth muscle cell | 1.79e-10 | 32 |
electrically responsive cell | 4.56e-10 | 61 |
electrically active cell | 4.56e-10 | 61 |
stromal cell | 6.54e-08 | 28 |
skin fibroblast | 1.87e-07 | 23 |
extracellular matrix secreting cell | 2.01e-07 | 15 |
GAG secreting cell | 3.47e-07 | 9 |
carbohydrate secreting cell | 3.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.05e-14 | 62 |
striated muscle tissue | 9.05e-14 | 62 |
myotome | 9.05e-14 | 62 |
muscle tissue | 5.58e-13 | 64 |
musculature | 5.58e-13 | 64 |
musculature of body | 5.58e-13 | 64 |
multilaminar epithelium | 3.42e-11 | 83 |
somite | 1.32e-10 | 71 |
presomitic mesoderm | 1.32e-10 | 71 |
presumptive segmental plate | 1.32e-10 | 71 |
dermomyotome | 1.32e-10 | 71 |
trunk paraxial mesoderm | 1.32e-10 | 71 |
paraxial mesoderm | 2.61e-10 | 72 |
presumptive paraxial mesoderm | 2.61e-10 | 72 |
dense mesenchyme tissue | 5.05e-10 | 73 |
artery | 2.50e-09 | 42 |
arterial blood vessel | 2.50e-09 | 42 |
arterial system | 2.50e-09 | 42 |
musculoskeletal system | 3.45e-09 | 167 |
systemic artery | 3.47e-09 | 33 |
systemic arterial system | 3.47e-09 | 33 |
trunk mesenchyme | 5.20e-09 | 122 |
epithelial vesicle | 1.02e-08 | 78 |
trunk | 2.32e-07 | 199 |
omentum | 2.58e-07 | 6 |
peritoneum | 2.58e-07 | 6 |
abdominal cavity | 2.58e-07 | 6 |
visceral peritoneum | 2.58e-07 | 6 |
unilaminar epithelium | 4.79e-07 | 148 |
mesenchyme | 6.47e-07 | 160 |
entire embryonic mesenchyme | 6.47e-07 | 160 |
connective tissue | 6.98e-07 | 371 |